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1 ifferent light colors: blue, green, red, and far-red.
2 els with excitation ranging from blue to the far-red.
3 c helix-loop-helix protein LONG HYPOCOTYL IN FAR RED 1 and the DELLA family of growth-repressing prot
8 es act as photoswitches between the red- and far-red absorbing parent states of phytochromes (Pr and
9 orphogenesis are phytochrome B (phyB), a red/far-red absorbing photoreceptor, and cryptochrome 1 (CRY
10 itor their ambient light signals through red/far-red absorbing phytochromes and blue/UV-A light absor
11 ion between the red-absorbing (P(r)) and the far-red-absorbing (P(fr)) forms of the photosensory prot
12 otoconversion between red-absorbing (Pr) and far-red-absorbing (Pfr) states, thereby ultimately conve
13 mediates the formation of the FHY1/FHL/PHYA far-red-absorbing form complex, whereby it plays a role
14 interconvert between red-absorbing P(r) and far-red-absorbing P(fr) states via photoisomerization of
19 netic characteristics suggest this pair of a far-red and a near-infrared fluorescent protein as an op
21 Two fluorescent proteins that emit in the far-red and infrared range for imaging applications in c
29 tive organic molecules to realize preferable far-red and NIR fluorescence, well-controlled morphology
31 g BBX32 display elongated hypocotyls in red, far-red, and blue light, along with reduced cotyledon ex
33 ease is triggered by wavelengths in the red, far-red, and near-IR regions, which can be pre-assigned
34 ction may mediate cross-talk between the red/far-red- and blue/UV-sensing pathways, enabling fine-tun
36 wth and development, and the effects of red, far-red, blue, and ultraviolet light have been well desc
38 ctive Pr (lambdamax = 660 nm) forms in a red/far-red-dependent fashion and regulates, as molecular sw
40 thesis, these studies provide a new class of far-red dyes with promising spectroscopic and chemical p
41 A is regulated by the transport facilitators far red elongated hypocotyl 1 (FHY1) and fhy1-like, an i
42 elationship between two homologous proteins, FAR-RED ELONGATED HYPOCOTYL1 (FHY1) and FHY1-LIKE (FHL),
44 Here, we present a phyA pathway in which FAR-RED ELONGATED HYPOCOTYL1 (FHY1), an essential partne
45 tor to nuclear import facilitators FHY1 (for FAR-RED ELONGATED HYPOCOTYL1) and FHL (for FHY1-LIKE).
46 owed that Arabidopsis (Arabidopsis thaliana) FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED
48 The transposase-related transcription factor FAR-RED ELONGATED HYPOCOTYL3 (FHY3) promotes seedling de
51 ther, these results suggest a model in which far-red enrichment can bypass FLC-mediated late flowerin
53 l of plant immunity genes and confirmed that far-red enrichment indeed contrastingly affects resistan
56 ed PSmOrange has, to our knowledge, the most far-red excitation peak of all GFP-like fluorescent prot
57 ation, 548 nm; emission, 565 nm) but becomes far-red (excitation, 636 nm; emission, 662 nm) after irr
61 l-penetrating peptides, which contain Cy5 as far red fluorescent donor and Cy7 as near-infrared fluor
63 ansition from S to G2 phase and engineered a far-red fluorescent protein, mMaroon1, to visualize chro
64 roduce PAmKate, a monomeric photoactivatable far-red fluorescent protein, which facilitates simultane
66 rt comparative testing of available GFP-like far-red fluorescent proteins along with a modified prote
67 We demonstrate that the signals of various far-red fluorescent proteins can be spectrally unmixed b
68 c platform (containing a (18)F isotope and a far red fluorochrome), we show good correlations between
70 ration of NeutrAvidin, labeled with either a far-red fluorophore or (111)In, there was a significant
73 roaches are discussed for conventional RFPs, far-red FPs, RFPs with a large Stokes shift, fluorescent
77 Phytochrome A (PHYA) is essential for the far-red (FR) high-irradiance responses (HIRs), which are
78 FHY3 direct target genes in darkness (D) and far-red (FR) light conditions, respectively, in the Arab
81 s indicated that a dysfunctional red (R) and far-red (FR) light receptor, phytochrome B (phyB), cause
88 tabilizes the bHLH protein LONG HYPOCOTYL IN FAR RED (HFR1), which can bind to and inhibit PIF4 funct
89 ATED HYPOCOTYL 5 (HY5) and LONG HYPOCOTYL IN FAR-RED (HFR1) proteins; and the epistatic relationships
90 the primary photoreceptor for mediating the far-red high irradiance response in Arabidopsis thaliana
91 phytochrome A (PHYA) is responsible for the far-red high-irradiance response and for the perception
94 ELONGATED HYPOCOTYL3 (FHY3) and its homolog FAR-RED IMPAIRED RESPONSE1 (FAR1), two transposase-deriv
95 and metabolites, the increased abundance of FAR-RED IMPAIRED RESPONSE1-like transcripts in nitrogen-
96 ana) FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), a pair of homologous
98 demonstrated to increase in abundance under far-red-induced shade avoidance conditions either decrea
99 able labeling of biological membranes in the far-red/infrared and exhibit the furthest red-shifted fl
100 ies now permit (1) optical regulation at the far-red/infrared border and extension of optogenetic con
103 ponse to the relative proportions of red and far red light was regulated by SIG5 through phytochrome
106 pmental responses associated with end-of-day far-red light (EOD-FR) signaling were investigated in ma
107 e reduction in the ratio of red light (R) to far-red light (FR) as a warning of competition with neig
109 ging plants have to adapt to a high ratio of far-red light (FR)/red light (R) light in the canopy bef
110 g responses to the ratio of red light (R) to far-red light (FR; an indicator of competition) by suppr
111 ococcidiopsis thermalis PCC 7203 grown under far-red light (FRL; >725 nm) contains both chlorophyll a
113 celerated by a reduced ratio of red light to far-red light (R/FR), which indicates the proximity of c
114 hotoreceptor that senses the ratio of red to far-red light (R:FR) to regulate the shade-avoidance res
116 exposure and to complete this process under far-red light (typical of dense vegetation canopies).
118 he Y263F change prevents a red light-induced far-red light absorbing phytochrome chromophore configur
119 transfer bands could be responsible for the far-red light absorption leading to PS I photochemistry
121 on mutants show an elongated hypocotyl under far-red light and are impaired in other far-red high-irr
122 ) regulates gene expression under continuous far-red light and is rapidly destabilized upon red light
123 hyposensitivity to continuous low-intensity far-red light and shows reduced very-low-fluence respons
124 and phyB2 tomato mutants and was reversed by far-red light applied immediately after the red or blue
128 ontaining photoreceptors that detect red and far-red light by photointerconversion between a dark-ada
129 s of cAMP and cGMP by up to sixfold, whereas far-red light can be used to down-regulate activity.
130 ying light intensities and ratios of red and far-red light caused by shading and neighbor proximity.
131 Finally we show that both shaded, low red/far-red light conditions and high temperature induce mor
132 gulation of photomorphogenesis under red and far-red light conditions involves both positively and ne
133 radation of PIFs in response to both red and far-red light conditions to promote photomorphogenesis.
136 tal results confirmed that cells grown under far-red light form biofilms with a significantly increas
137 fted from white light D2O-seawater medium to far-red light H2O-seawater medium, the observed deuterat
138 ty, such that axillary buds growing in added far-red light have greatly increased receptor transcript
139 SCL21 transcript itself is down-regulated by far-red light in a phytochrome A- and PAT1-dependent man
141 Additionally, exposure to yellow but not far-red light leads to comparable increases in the expre
142 t changing R:FRs or lowering R:FRs by adding far-red light led to the appearance of small nuclear bod
144 is part of an extensive acclimation process, far-red light photoacclimation (FaRLiP), which occurs in
149 rs that interact physically with the red and far-red light photoreceptors, phytochromes, are called P
150 under a light program of alternating red and far-red light pulses and were named eid (for empfindlich
151 -limited and super-resolution imaging in the far-red light range, is optimally excited with common re
152 ribution of light quality, including the red/far-red light ratio (R/FR) that informs plants about pro
153 Plants interpret a decrease in the red to far-red light ratio (R:FR) as a sign of impending shadin
155 phytochrome B mutation and of low red light:far-red light ratio on branching were largely due to red
158 egetation-induced reduction in the red light:far-red light ratio provides a competition signal sensed
159 th light quality (as crowding and the red-to-far-red light ratio) and phosphate availability, such th
160 carpel development to spt mutants by low red/far-red light ratios, simulating vegetation shade, which
163 through direct physical interaction and red/far-red light reversible phosphorylation to fine-tune th
165 re dimeric proteins that function as red and far-red light sensors influencing nearly every phase of
166 hanges in gene expression in response to red/far-red light signals in part by physically interacting
168 nsive photoacclimative response to growth in far-red light that includes the synthesis of chlorophyll
169 Land plant phytochromes perceive red and far-red light to control growth and development, using t
170 in plants, which measure the ratio of red to far-red light to control many aspects of growth and deve
171 vely ablated tumors by the illumination with far-red light to the mice, presumably through the combin
172 bidopsis thaliana) mutants hypersensitive to far-red light were isolated under a light program of alt
173 Here we present clear evidence that even far-red light with wavelengths beyond 800 nm, clearly ou
174 of a unique CBCR called IflA (influenced by far-red light), demonstrating that a second CBCR called
175 liar shade or neighbor proximity (low red to far-red light), some plant species exhibit shade-avoidin
176 ng that blue, yellow, and red light, but not far-red light, are absorbed by the neutral radical state
180 nsed through a reduced ratio between red and far-red light, we show here through computational modeli
181 L3 (FHY3) promotes seedling de-etiolation in far-red light, which is perceived by phytochrome A (phyA
182 sing tissue penetrable and clinically useful far-red light, which kills the cancer cells through the
183 oximity as a decrease in the ratio of red to far-red light, which triggers a series of developmental
184 en the red light-absorbing (Pr) form and the far-red light-absorbing (Pfr) form is the central featur
187 gnated PIF7, interacts specifically with the far-red light-absorbing Pfr form of phyB through a conse
191 light-absorbing state and the photoactivated far-red light-absorbing state revealed a large scale reo
192 To overcome these problems, we prepared the far-red light-activatable prodrug of PTX by conjugating
195 oximity and shade (i.e. to the perception of far-red light-enriched light filtered through or reflect
197 eds display strong hyposensitive response to far-red light-mediated seed germination and light-regula
198 y because it enables plants to deetiolate in far-red light-rich environments typical of dense vegetat
199 multiple photoreceptors, among which the red/far-red light-sensing phytochromes have been extensively
217 red-light-absorbing, ground state (Pr) and a far-red-light-absorbing, photoactivated state (Pfr).
219 ), and two transcription factors, LONG AFTER FAR-RED LIGHT1 (LAF1) and LONG HYPOCOTYL IN FAR-RED1 (HF
224 ficient and up to 40% quantum yield, whereas far-red operation region enables both in vitro and in vi
225 edly hypersensitive to red light, but not to far-red or blue light, and are compromised in multiple p
228 e in leaf expansion under monochromatic red, far-red, or blue light, and interaction with phytochrome
237 less complex than those reported for the red/far-red photocycles of the related phytochrome photorece
238 in favor of a photothermal mechanism in the far-red photolysis of dye-sensitized, lipid-vesicle base
239 t slower degradation of the light-labile red/far-red photoreceptor phytochrome A and are photomorphog
240 cclimation appears to be controlled by a red/far-red photoreceptor, RfpA, as well as two response reg
243 CAB repositioning is mediated by the red/far-red photoreceptors phytochromes (PHYs) and is inhibi
244 Plant phytochromes are photoswitchable red/far-red photoreceptors that allow competition with neigh
250 ht is the regulated translocation of the red/far-red photoreceptors, phytochromes, from the cytoplasm
252 wn to be controlled by phytochromes, the red/far-red photoreceptors; however, transcriptome analyses
254 d; CRY1 interacts specifically with the dark/far-red (Pr) state of phyB, but not with the red light-a
255 ignaling involves perception of incident red/far-red (R/FR) light by phytochromes (PHYs) and modulati
258 phototropic response is enhanced by the red/far-red (R/FR)-sensing phytochromes (phy) with a predomi
260 toreceptor phytochrome B (phyB) by a low red/far-red ratio (R:FR), which is a signal of competition i
261 responses are mediated by changes in the red/far-red ratio of the light, which is perceived by phytoc
262 NG LOCUS C (FLC); we found that a low red to far-red ratio, unlike cold treatment, lessened the effec
264 ile the most conspicuous response to low red/far-red ratios (R:FR) of shade light perceived by phytoc
265 y shade involve the perception of low red to far-red ratios (R:FRs) by phytochrome B (phyB), which le
266 weak charge transfer bands absorbing in the far-red region in the ensemble of excitonically coupled
267 rt a new, monovalent probe that emits in the far-red region of the visible spectrum with properties d
270 Phytochromes are an important class of red/far-red responsive photoreceptors that act as light-acti
274 a, we show that the perception of low red to far-red shade by the cotyledons triggers hypocotyl cell
275 ve shown that hypocotyl growth in low red to far-red shade is largely dependent on the photoreceptor
278 tochrome that bleaches rather than forming a far-red-shifted Pfr state upon red light activation.
279 ibit tunable photophysical properties in the far-red spectral region with moderate fluorescent quantu
281 on system based on a chimera between the red/far-red switchable cyanobacterial phytochrome Cph1 and t
283 ned to combine 1) dual-emission ratioing, 2) far red to infrared wavelengths for in vivo mammalian im
284 tegy to expand anti-Stokes shifting from the far-red to deep-blue region in metal-free triplet-triple
285 synthesized and tested the first dual-color, far-red to near-infrared (nIR) emitting analogue of beet
286 one fluorescent semiconducting polymer based far-red to near-infrared (NIR) Pdot nanoprobe for the ra
287 s the design and synthesis of a photostable, far-red to near-infrared (NIR) platform for optical volt
289 Studying Chlorobaculum tepidum cultures with far-red to near-infrared light-emitting diodes, we found
292 HOCl sensing, such as high brightness, ideal far-red to NIR optical window, excellent photostability,
293 BeRST 1 is the first member of a class of far-red to NIR voltage sensitive dyes that make use of a
294 ls or to electricity in semiconductors using far red-to-near infrared (NIR) light, which accounts for
295 ncement, which originates from (1) Enhancing far red-to-NIR (700~1200 nm) harvesting, up to 25%.
296 Mother Nature has evolved to smartly capture far red-to-NIR light via their intelligent systems due t
297 emonstrate the structural effects on obvious far red-to-NIR photocatalysis enhancement, which origina
298 f a new strategy, based on adopting nature's far red-to-NIR responsive architectures for an efficient
299 riety of fluorescent proteins, including new far-red variants, to produce a comprehensive guide to ch
300 ess emission maxima that range from green to far red wavelengths, and enable sensitive biomolecule de
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