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1 iable effect on allergen PC15 (2-fold to 500-fold change).
2 ally abundant between phases (P < 0.05, >/=2-fold change).
3 eached a plateau between 75 and 480 min (>50-fold change).
4 ty (e.g. the equivalent to a gene expression fold-change).
5 mmune responses were those with the greatest fold change.
6 WRKY70 were also found upregulated with high fold change.
7 of percentages, network analysis, and taxon fold change.
8 wever, this increase did not reflect a >/= 2-fold change.
9 in both studies with concordant direction of fold change.
10 ime points, with 95% confidence intervals on fold-change.
11 occupancy changes at FLC did not reflect RNA fold changes.
12 onsiderably less power for detecting smaller fold changes.
13 either high-expressed and/or exhibited high fold changes.
14 only 5 RNAs, with FDRs of <0.001-fold and >2-fold changes.
15 ssification of signals based on the observed fold changes.
17 change -1.65, P=.02), and Clostridium (log2 fold change -1.47, P=.002) were underrepresented among s
18 log2 fold change -2.22, P=.009), Dorea (log2 fold change -1.65, P=.02), and Clostridium (log2 fold ch
19 d use cut-offs as low as log10(ratio) = 0.1 (fold-change = 1.26), generating larger gene lists that v
21 00 M(-1)), five pi-pi contacts produced a 17-fold change (126 000 M(-1) right arrow over left arrow 7
22 strains compared with nonadjuvanted vaccine (fold change 16.8 vs 4.3 for H3N2 and 7.0 vs 1.6 for B).
23 ed in pregnant women versus controls (median fold-change 2.60 vs 1.49 [interquartile range, 0.94-7.53
25 fold change -2.15, P=.003), Dialister (log2 fold change -2.22, P=.009), Dorea (log2 fold change -1.6
26 old change -3.41, P=.03), Oscillospira (log2 fold change -2.80, P=.03), Lactococcus (log2 fold change
27 99 genes (DEGs; false discovery rate P<0.05, fold change |2|, controlling for confounds) previously a
28 y PT antibodies increased post-immunization (fold-change, 2.64; 95% confidence interval [CI], 2.12-3.
29 was very highly expressed in HH-HCC (median fold change 2291, p = 0.0072) and was detected by immuno
30 2 fold change -3.19, P=.05), and Dorea (log2 fold change -3.00, P=.05) were underrepresented among su
31 fold change -2.80, P=.03), Lactococcus (log2 fold change -3.19, P=.05), and Dorea (log2 fold change -
33 alNAc was significantly increased in pooled (fold change = 3.33, p < 0.001) and individual (p = 0.009
34 significantly (P = 2 x 10(-7)) reduced (mean fold change, 3.5 [SEM, 0.7]) in splenic aspirates from p
35 eased in inflammatory lesional morphea skin (fold change = 30.6, P = 0.006), and preliminary transcri
37 the top 966 genes altered (>log2 = 1.8, 3.5-fold change), 670 genes were downregulated and 296 genes
38 reservoir did not change significantly (1.16-fold change; 95% confidence interval [CI], .70- to 1.92-
39 ession models showed that rates of biomarker fold change accelerated from 6-8 years before death with
40 er, we describe and characterize log allelic fold change (aFC), the magnitude of expression change as
44 class correlation coefficient, and performed fold change analysis, which was further extended to inve
46 selected from the microarray data based upon fold change and biological relevance, and 8 of these tra
49 XCR4, ITGB2, and EGF) were selected based on fold change and P value and further validated using an i
51 nt analysis (GSEA), a score that can combine fold change and P-value together is needed for better ge
52 cance score pi-value by combining expression fold change and statistical significance (P-value), and
53 gnificant bias in the expression levels, the fold change and the correlations between expression leve
54 ered between the ADG groups based on t-test, fold changes and partial least square discriminant analy
55 ads to more accurate estimates of expression fold-changes and tests of differential expression compar
56 ation, Y: +10 +/- 4 fold change; O: +4 +/- 2 fold change) and anabolic hormone milieu (testosterone,
58 ificance (adjusted p = 0.0032), the greatest fold change, and was markedly elevated in colon and jeju
60 eversible chaperone binding, chromatin fiber folding changes, and previously undescribed modification
61 to urine volume, specific gravity and median fold change are compared for their capacity to recover l
62 also improved the ability to detect reliably fold changes as small as 1.33-fold for the same 20 MCF-d
64 c-di-GMP binding by the riboswitch induces folding changes at atypical splice site junctions to mod
68 ontains the expression information including fold changes between normal and tumor samples for mRNAs
71 st estimating protein fold-changes from mRNA fold-changes between different cell-types, and highlight
73 croarray to assess the TTA method showed low fold-change bias (less than twofold difference and Pears
74 80% of phosphosites exhibiting large (>/=1.5-fold) changes compared to control can be modulated by or
75 ulated from DEBtox parameters indicated a 27 fold change comparing exposure from 48 to 720 hours (sum
77 gest that based on the chosen statistical or fold change cut-off; microarray analysis can provide ess
82 eter tuning, this synthetic circuit exhibits fold-change detection for four successive rounds of two-
85 ll as sensitivity to input changes including fold-change detection, a response that depends only on f
91 Notably, these studies reveal modest (~1.5-3-fold change) effects on M. tuberculosis replication.
93 erase chain reaction (RT-qPCR) platforms for fold change estimates than for raw abundance estimates,
94 5p were up-regulated in individuals with FL (fold change (FC) = 1.55, p = 1.36 * 10(-14) and FC = 1.2
96 near models were used to assess the per gene fold change (FC) for stimulated versus unstimulated samp
99 egulations of antimicrobial peptides (S100A8/fold change [FCH], 13.04; S100A9/FCH, 11.28; CCL20/FCH,
101 he platform comes preloaded with logarithmic fold changes from 44 data sets on Mvarphi stimulation.
103 e results caution against estimating protein fold-changes from mRNA fold-changes between different ce
106 s showed suppression of glucagon at 120 min (fold change glucagon120/0 <1) during OGTT, whereas 21-34
107 In the longitudinal study, an increase of fold change glucagon120/0 was associated with an improve
110 total of 111 probesets (91 annotated genes, fold change > 2.0 and false discovery rate < 0.25) were
112 was detected for more than 3,500 genes (log2 fold change >/= 1, false discovery rate </= 0.01), many
113 relaxed cutoffs for differential expression (fold change >/=1.2; nominal P value <0.01), we identifie
114 oci and 247 hypermethylated loci were found (fold change >/=1.3; P < 0.005; cases vs. controls).
115 R-induced transcriptomic responses (absolute fold change >/=1.5 and P</=0.05) were comparable in IWAT
116 ons between groups were made with a combined fold change >/=2 and Student's t-test p-value < 0.05 to
117 kines with significant different expression (fold change >/=2 or </=-2, and q-value <5%) between expo
119 ts of miR-133a defined in unstressed hearts (fold change >/=25%, false discovery rate <0.02), only 4
120 Genes were identified (corrected p < 0.05, fold change >/=|1.2|), and functional analysis was perfo
121 is versus idiopathic dilated cardiomyopathy (fold change >1.2; false discovery rate <5%) from which a
122 ntly altered the abundance of 76 proteins (a fold change >1.4, or <0.6, p-value <0.05) and several of
124 wenty-seven differentially expressed miRNAs (fold change >1.5; P value <0.01) were identified, includ
125 es were differentially expressed in HDM APT (fold change >2 and false discovery rate < 0.05), with in
126 according to the ANOVA models, and a log(2)-fold change >2.5 were considered to be differentially ex
128 e identified (false discovery rate </= 0.05, fold change >|1.5|) and used to develop a prediction mod
129 fferentially expressed compared with adults (fold-change >/= 50%, false discovery rate = 0.02) and th
130 erential gene expression (thresholds P<0.05; fold-change >1.5) and pathway activation (Ingenuity) wer
131 cross diseases for statistical significance (fold change>/=1.5 and false discovery rate</=0.05), to i
132 up-regulated in alcohol dependent subjects (fold change>/=1.5, false discovery rate (FDR)</=0.3; p<0
134 fy differentially expressed genes (criteria: fold change, >/= 2.0; false discovery rate </= 0.05) in
138 e discovery rate, 1040 genes exhibited >1.15-fold change in both conditions; 297 were upregulated and
140 three pi-pi contacts with light caused an 8-fold change in chloride affinity (40 300 M(-1) right arr
141 ecules using dRT-LAMP chemistry detected a 2-fold change in concentration of HIV-1 RNA despite a 6 de
142 ferential expression defined as at least a 2-fold change in either direction and a P-value </=0.05.
145 ine deaminase, we obtained a approximately 3-fold change in enzyme activity by the photocontrolled mo
146 nd known long non-coding RNAs were ranked by fold change in expression between tumours that subsequen
151 valuated using in vitro assays measuring the fold change in IC(50) caused by resistance mutations.
153 /Km ratios) and l (l-THA; approximately 5000-fold change in kcat/Km ratios) alternative substrates.
154 rred l-serine-O-sulfate ( approximately 1200-fold change in kcat/Km ratios) and l (l-THA; approximate
155 nal approach that correlates gene expression fold change in lesional skin with the Psoriasis Area and
156 F-induced transcription correlates best with fold change in nuclear NF-kappaB, not absolute nuclear N
158 nse patterns change substantially over a 100-fold change in odor concentration, apparently degrading
160 minary longitudinal analysis showed that the fold change in PR3 RNA levels in WG PBMCs corresponded t
164 n-based MRI contrast agent that provides a 9-fold change in relaxivity via switching between the Mn(3
165 is indicated an overall 5,000-fold and 1,100-fold change in selectivity, respectively, for the Glu- a
166 mode against glucose and a subsequent 1,600-fold change in specificity of the ancestral protein.
167 duced for face identity were tolerant to a 2-fold change in stimulus size, suggesting that they refle
168 of single-site binding typically spans an 81-fold change in target concentration, an effect that limi
169 changes, which caused a approximately 70,000-fold change in the ancestral protein's specificity.
171 n protein spots with the highest significant fold change in the cooked samples were involved in carbo
173 to monovalent, which resulted in a near 1000-fold change in the equilibrium association constant, by
174 el of nuclear Smad3 varied across cells, the fold change in the level of nuclear Smad3 was a more pre
175 riene E4 was the metabolite with the highest fold change in the rejection group compared to nonreject
176 In undoped films we demonstrate more than 10-fold change in the thermal free-carrier concentration pr
177 ABT-737 treatment, this agent induces a two-fold change in the transcription of nearly 430 genes.
178 onal work capacity is demonstrated over a 10-fold change in yarn cross-sectional area, which is impor
179 for multiple hypotheses, LMP1 TES2 caused >2-fold changes in 1,916 mRNAs; 1,479 RNAs were upregulated
180 , diDO-IPTL quantification discriminates 1.5-fold changes in abundance of over 1000 proteins with 88%
182 3, TNFSF11, and TNFRSF11B and genes with >10-fold changes in either direction such as CHRM3, IL12B an
183 Among them, 26 genes show more than two-fold changes in expression level in an OmpR knock-out st
185 e to viral infections, with relatively small fold changes in IFN-beta expression resulting in the act
186 e detection, a response that depends only on fold changes in input, and not on absolute changes.
187 t the FN nanofibers underwent 3.3-fold and 9-fold changes in length and width, respectively, and that
191 ys revealed that 53 genes had greater than 3-fold changes in the expression in Sp1-silenced NHKs as c
192 r response to cadmium showed globally larger fold changes in TO1 when compared to TO2; iii) the inter
193 ectrometry (LC-MS), and we find that up to 5-fold changes in tRNA abundance can be quantified from su
195 e substitution, and that there is a small (3-fold) change in the photokinetics of the forward reactio
197 veloped a mathematical model to quantify the fold-change in concentration of any molecule included in
199 integrated HIV DNA compared with blood (4.26 fold-change in DNA; 95% confidence interval [CI] = 2.61-
200 ng both the absolute level of expression and fold-change in expression using the fluorescent protein
201 = .045) and CD38+HLA-DR+ CD8+ T cells (1.40 fold-change in integrated HIV DNA per 1-unit increase in
202 grated HIV DNA with PD-1+ CD4+ T-cells (1.44 fold-change in integrated HIV DNA per 10-unit increase i
203 model, we find that one key parameter - the fold-change in protein concentration necessary for lumin
204 antitatively reproducible, including minimal fold-changes in IL13, TNFSF11, and TNFRSF11B and genes w
205 adding and removing phosphate group(s) is 3-fold: changes in the local/global geometry, alterations
207 s revealed changes (p-value </= 0.05, >/=1.5-fold change) in lipid, purine, and sterol metabolism in
208 antly up-regulated or down-regulated (>/=1.5-fold change) in OA PBLs, at a false discovery rate of 5%
211 than 2-fold (FDR corrected p-value </=0.032, fold change (log2) >/= 1) in response to gemfibrozil exp
212 than 2-fold (FDR corrected p-value </=0.032, fold change (log2) >/= 1) in response to gemfibrozil exp
213 ngly downregulated in PP versus normal skin (fold change < 0.25, 44.4-fold) and strongly upregulated
215 d out by their significance level (p-value), fold change, mass-to-charge ratio, retention time, and i
217 icantly increased proinflammatory cytokines (fold-change messenger RNA: interleukin-1beta = 7.6, mono
218 ctor-alpha = 2.2) and proteolysis effectors (fold-change messenger RNA: muscle RING-finger protein 1
219 ere selected by combined analysis of maximum fold changes (MFCs) in concentrations and P-values resul
220 adjacent breast tissues, including 74 with a fold change more than two of which 17 were never reporte
222 c gravity (2.3-fold), postacquisition median fold change normalization (1.8-fold increase), postacqui
223 for raw abundance estimates, suggesting that fold change normalization against a control is an import
224 A:DNA ratio and c-MYC induction: Y: +4 +/- 2 fold change; O: +1.9 +/- 1 fold change), translational e
225 ficiency (S6K1 phosphorylation, Y: +10 +/- 4 fold change; O: +4 +/- 2 fold change) and anabolic hormo
226 al inhibition studies to achieve significant fold changes observed by acetylation proteomics methods.
227 significantly differed (P < .05) with a log2 fold change of >/= 1.0 between patient groups were inter
228 nscription of 2692 genes (p value of <0.001, fold change of >/=2) after 7 days of exposure, whereas C
230 predictor of overall survival (HR for a two-fold change of 1.23, 95% CI 1.13-1.34; p<0.0001) and non
234 pecies at 9415.45 Da demonstrates an average fold change of 4.7 (p-value 0.017) and was identified as
235 s. 74.9 days, respectively; 6.7-fold vs. 3.7-fold change of cytokines, respectively), suggesting the
236 symptomatic patients, the mean (SD; 95% CI) fold change of expression of proinflammatory mediators i
239 studies are powered well for detecting large fold changes of ChIP enrichment over the control sample,
240 om mouse, corresponding to expected relative fold changes of one for mouse proteins and from 0.25 to
243 gest that miRNA and mRNA pairs with opposite fold changes of their expression and with inverted corre
244 n skin accounted for 54% of the variation in fold changes of urinary PAH metabolites (p < 0.002).
247 tivity levels indicated the up-regulation (6-fold change) of TcP5CDH during the infective stages of t
250 ients with Alzheimer's disease and controls (fold change) or the ratio between biomarker concentratio
251 ed proteins showed either a strikingly large fold-change, or were completely suppressed or newly indu
252 r expressed in PET false-negative cases (5.3-fold change, P < .001) which provides a mechanistic expl
253 ween children with PA and NA children (45.59-fold change, P < .001), followed by IL5 and then IL13.
254 tween children with PA and NA children (23.3-fold change, P < .01) and children with PS (18.5-fold ch
255 ilumab treatment signature of 821 probes (>2-fold change, P < .05) significantly modulated in the 300
257 of the differential proteome data sets (>/=2-fold change, P < 0.05), showed that several proteins inv
260 lorie intake increased among ES (1.5 +/- 0.2 fold-change, P = 0.02) but not controls (1.1 +/- 0.1 fol
263 ificantly differentially expressed spots (>2-fold change; P < 0.05) between the subtypes of JIA.
265 CD4-CD8- T cells (mean +/- SEM 1.35 +/- 0.12-fold change; P = 0.008), stimulated FoxP3 expression in
268 and wnt9a) correlated more strongly with the fold change, rather than the level, of nuclear Smad3.
271 xpression (1.6- to 7.2-fold and 8.3- to 33.9-fold changes, respectively), and the force characteristi
272 response than ADC, with 2.8-fold versus 1.3-fold changes, respectively, by day 5 of drug treatment.
274 ver a large dynamic range in both expression fold change (spanning nearly four orders of magnitude) a
275 entially expressed proteins (at least +/-1.5-fold change; Student's t test, P < 0.05) were identified
276 ng protein-substrate linker density up to 50-fold changed tethering, but did not affect osteogenesis,
277 e intramolecular ET rate constants almost 10-fold: changes that are correlated with increased flexibi
278 odological variation, we generated and used 'fold change', that is, ratio of mean amyloid uptake (glo
281 d formal statistical techniques to translate fold changes to profiles of microRNA targets which were
282 tion: Y: +4 +/- 2 fold change; O: +1.9 +/- 1 fold change), translational efficiency (S6K1 phosphoryla
283 tissues demonstrated that the consistency of fold-change trends in a single short amplicon between sn
284 target RNAs showed a concordance of 100% of fold-change trends in at least two short amplicons, whic
287 were significantly upregulated, with median fold change values of 2.9, 31.7, 4.6, and 6.8, respectiv
293 entified and 740 proteins that presented a 4-fold change were considered a CRC proteomic signature.
294 ersus-control differential expression, their fold changes were </= 1.33, and an independent cohort yi
296 ntially expressed lncRNAs with more than 2.0-fold change when compared the expression profiles of P1
297 measured by quantitative PCR, and the median fold change, when compared with the median of healthy co
298 gle promoters and their resulting expression fold change will be altered with changes in affinity.
300 in vitro (false discovery rate, </=0.001; 2-fold change) with 557 showing decreased and 329 showing
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