ライフサイエンスコーパス: formalism

1 change and J approximately -290 cm(-1) (-2 J formalism).

2 fraction data within the superspace symmetry formalism.

3 e experiments, based on a mathematical graph formalism.

4 tributed data processing using the MapReduce formalism.

5 n and decision making suffers from a lack of formalism.

6 ation data using the Lipari-Szabo model-free formalism.

7 QSH) effect based upon the scattering matrix formalism.

8 epigenetic landscape through a mathematical formalism.

9 of salt concentration following homopolymer formalism.

10 aluate GB/interface resistance in a Landauer formalism.

11 primary current distribution using Newman's formalism.

12 l binding phenomenon based on an established formalism.

13 a Markov process using a recently developed formalism.

14 between species using combinatorial entropy formalism.

15 (red) and k(ox) predicted by the Marcus-Hush formalism.

16 des in a stoichiometric network, within this formalism.

17 d this apparently very different theoretical formalism.

18 erent approach based on a stochastic kinetic formalism.

19 be explained by a Henderson-Hasselbalch-type formalism.

20 auser effects were analyzed using model-free formalism.

21 c calculations were performed using the MIRD formalism.

22 determined using the Lipari-Szabo model-free formalism.

23 and created visual models using the L-system formalism.

24 c regulatory networks based on the Petri net formalism.

25 d analyze these results using the model-free formalism.

26 genetic network using the S-system modeling formalism.

27 (R(ex)) were obtained using the Lipari-Szabo formalism.

28 ransfer based on the Marcus-Hush (two-state) formalism.

29 n a generalization of the Shockley-Read-Hall formalism.

30 ion obtained by an appropriate thermodynamic formalism.

31 tions within the Green-Kubo phenomenological formalism.

32 terms of experiments and a Landau-de Gennes formalism.

33 waves via the parametrized diastolic filling formalism.

34 transport phenomena within a lattice kinetic formalism.

35 we explain by employing a Landauer-Buttiker formalism.

36 nequilibrium Schwinger-Kadanoff-Baym-Keldysh formalism.

37 nts and morphological outcomes using a graph formalism.

38 ay be untestable without behavioral economic formalisms.

39 ntation of connectomes by using graph theory formalisms.

40 ignificant differences are noted for the two formalisms.

41 This formalism allows spin-dependent parameters to be determi

42 The proposed formalism allows the transformation of glucose in the co

43 The EC formalism allows us to combine information entropy, ener

44 layer and demonstrate a rigorous theoretical formalism and analysis method for computing the induced

45 tion for stochastic effects, no well-defined formalism and associated special named quantities have b

46 alyzed in terms of the Lipari-Szabo dynamics formalism and compared to those of the wild type.

47 TFcP](2+) complexes were analyzed using Hush formalism and found to be of class II (in Robin-Day clas

48 an-field theories like the Poisson-Boltzmann formalism and its approximations, which are routinely us

49 ures are first illustrated by a coupled mode formalism and later verified by employing the Steady-sta

50 of the thermodynamic coupling function (TCF) formalism and Markov state model analysis to a 50-mus da

51 NMR", is based on a largely extended GFT NMR formalism and promises to have a broad impact on project

52 heoretical limitations of the authors' Dirac formalism and suggest the von Neumann open systems appro

53 els and point to potential advances in model formalisms and training procedures that promise to enhan

54 led with use of the Hansen-Coppens multipole formalism, and features associated with both intra- and

55 this work--two based on the generalized Born formalism, and one based on a Gaussian solvent-exclusion

56 rs was incorporated via a reaction-diffusion formalism, and this suggests that ROS may be the primary

57 efront the need for a well-defined dosimetry formalism applicable to deterministic effects that is ac

58 Mathematical formalisms based on a logic formalism are relatively simple but can describe how sig

59 ore properly described using the Marcus-Hush formalism are shown to yield incorrect values of k(0) an

60 These formalisms are mostly monotonic and are now known to be

61 Two theoretical formalisms are widely used in modeling mechanochemical s

62 nalysis of RDCs and holds the classic tensor formalism as a special case.

63 the concept of surface plasmons, keeping the formalism as simple as possible by focusing on the quasi

64 The Marcus-Hush formalism, as exposited by Chidsey, predicts that the va

65 nd were then used to generate a mathematical formalism based on general laws of the disease (i.e., di

66 A model formalism based on Voronoi construction is developed to

67 We have developed a general formalism based on Wigner's original ideas concerning an

68 Mathematical formalisms based on a logic formalism are relatively sim

69 We outline a formalism, based on a modified Kalman smoother, for usin

70 The theoretical formalism, based on stochastic path integral weights of

71 We develop a formalism, based on the mode expansion method, to descri

72 We illustrate the utility of the proposed formalism by analyzing simulations of unfolding-refoldin

73 electivity extends traditional thermodynamic formalism by including substrate-induced structural alig

74 Flow is determined with Kety-Schmidt formalism by modeling the uptake of gadolinium chelate i

75 can be described with the same mathematical formalism by replacing the electron-phonon coupling para

76 timation and model selection in the Bayesian formalism by using sequential Monte Carlo (SMC) approach

77 e including projector augmented wave (GIPAW) formalism calculations using periodic boundary condition

78 mputers, and (ii) the discovery of a quantum formalism called quantum crystallography and the use of

79 mputers, and (ii) the discovery of a quantum formalism called quantum crystallography and the use of

80 demonstrate how optimizers generated by this formalism can be faster and more effective, while remain

81 This formalism can be readily used to evaluate uncertainty in

82 The proposed formalism can be used in atomic force microscopy experim

83 Numerical calculations with a Butler-Volmer formalism can estimate the contribution to the OCP mixed

84 The formalism combines simulations for each of the relevant

85 We show that a state evolution formalism correctly derives the true sparsity-undersampl

86 The formalism covers a broad range of steady-state dynamical

87 Such a mathematical formalism defines explicit mechanistic hypotheses about

88 Our calculations within the standard formalism demonstrate that the phonon-induced renormaliz

89 tive to tertiary structure, thus the current formalism demonstrates that the Amide I contour may be u

90 1 eV), which could not be predicted by using formalisms derived from effective medium theory.

91 We show that this formalism derives directly from the physics of RDCs.

92 the Non-equilibrium Green's Function (NEGF) formalism, describe their basic features, and underline

93 approach, when combined with the analytical formalism described here, brings additional sensitivity,

94 The model generated in the bonded cumomer formalism describes key pathways of tumor intermediary m

95 We present a general formalism describing an additive's tendency to trigger t

96 he exosome concentration in solution using a formalism describing diffusion-limited binding under con

97 The formalism developed here is also useful for multiscale f

98 simulate patterns of gene activities using a formalism developed to simulate patterns of memory in ne

99 cient of the redox species), the Marcus-Hush formalism effects a limiting current that can be signifi

100 The formalism elucidates the dramatic impacts of initial cel

101 In the new rule-based formalism, every reactant and product pattern and every

102 Without additional evidence, however, these formalisms fail to explain why a decision-maker would ch

103 e automation is achieved by using a Bayesian formalism for all parameters of the model including the

104 ents show that the Monod, Wyman and Changeux formalism for allosteric proteins, originally developed

105 e of qualitative reasoning (QR) as a unified formalism for both tasks.

106 We provide a formalism for calculating the effects upon T2 of tissue

107 analysis within the framework of the Ramsey formalism for chemical shift.

108 ically coupled spiking neurons and present a formalism for computing the network statistics in a pert

109 We provide here a formalism for dealing with such problems.

110 A general formalism for describing and analyzing these diverse sys

111 trode kinetics and the Michaelis-Menten (MM) formalism for enzymatic catalysis, with the BV model acc

112 ent of the protein homeostasis network and a formalism for how this network of competing pathways int

113 al line charges and with the order-parameter formalism for hydration forces.

114 , the sector constraints represent a general formalism for integrating omics data from any experiment

115 ls of polymers and the Poisson-Nernst-Planck formalism for ionic current.

116 orce field based on the charge-equilibration formalism for molecular dynamics simulations of phosphol

117 This article describes a general formalism for obtaining spatially localized ("sparse") s

118 We introduce a maximum likelihood formalism for separating signal from a drifting baseline

119 ysis, co-invented by Reinhart Heinrich, is a formalism for the analysis of biochemical networks, and

120 resent a DEG integration model as a powerful formalism for the analysis of drug-effect relationships

121 nding is modeled using the McGhee-von Hippel formalism for the cooperative binding of ligands to a mo

122 l model, which incorporates the Debye-Huckel formalism for the electrostatics, was used and found to

123 diffuse reflection data in the Kubelka-Munk formalism for the quantitation of contaminants in a comp

124 ive motor proteins, we develop a theoretical formalism for the randomness parameter, a dimensionless

125 We present a formalism for unifying the inference of population size

126 To do this we require computational formalisms for both simulation (how according to the mod

127 Our approach is based on a formalism from machine learning called 'multitask learni

128 doses were calculated according to the MIRD formalism from small-animal PET/CT images.

129 well established branch of mathematics whose formalism has a vast range of applications from the soci

130 t dynamics of such models, relatively little formalism has been established.

131 This formalism has great flexibility, which we show by illust

132 l descriptions such as the Clausius-Mossotti formalism have been used to relate molecular polarizabil

133 a summary metric derived from the hypergraph formalism-hypergraph cardinality-we investigate individu

134 Using probabilistic inference formalisms, I show how all these approaches can be unifi

135 However, each code implements the formalism in a different way, raising questions about th

136 (BN) have been a popular predictive modeling formalism in bioinformatics, but their application in mo

137 To do so, we develop a formalism in which high-dimensional configurations are n

138 volved with the advent of different modeling formalisms in systems biology and their ability to be ex

139 The formalism includes exact treatment of Maxwell's equation

140 The formalisms independently developed in the two areas for

141 Analysis of the data in terms of the Marcus formalism indicates that the human glutathione transfera

142 ent) makes coherent and incoherent tunneling formalisms indistinguishable when only one level partici

143 tructed in this paper through a mathematical formalism involving conditional Gaussian mixtures combin

144 The Hilbert space formalism is a powerful language to express many cogniti

145 The Mori-Zwanzig formalism is an effective tool to derive differential eq

146 The formalism is applied to simulated data obtained from a k

147 ion of the appropriate background theory and formalism is articulated before examining their biosensi

148 Finally, the Hodgkin-Huxley formalism is central to computational neuroscience to un

149 A grand canonical formalism is developed to combine discrete simulations f

150 A formalism is elaborated to evaluate cell-surface-bound,

151 The formalism is exact in that it does not involve any other

152 The order statistics-based formalism is extended to cover the analysis of correlate

153 The formalism is illustrated using the alkaline-induced tran

154 del based on nonequilibrium Green's function formalism is introduced, which explains the observed Fan

155 The random walk formalism is used across a wide range of applications, f

156 While this formalism is well established for amorphous (entropicall

157 alized plasmons and describe the theoretical formalism, its experimental validation and the potential

158 Given that, in a simple transition state formalism: k(u)=K(#)k' (where K(#) describes the equilib

159 idation state, and that the [N(3)](-)/Ru(II) formalism may be more informative.

160 e additional insights gained in the Bayesian formalism more than make up for this cost, especially in

161 Moreover, this formalism naturally leads to an algorithm to parallelize

162 gle resource has focused on the prescriptive formalism of a necessary niche width and limiting simila

163 The formalism of adaptive dynamics reveals two evolutionary

164 Using a network-based formalism of allostery, we introduced a community-hoppin

165 the electron density distribution within the formalism of Bader's theory (AIM method) reveal that in

166 We use the formalism of chemical reaction networks as a 'programmin

167 uid chromatography were studied based on the formalism of classical thermodynamics.

168 A quantitative formalism of electrochemical surface plasmon resonance (

169 Using the formalism of hypergraphs, we identify the presence of gr

170 cal and experimental framework, based on the formalism of information theory, to quantitatively predi

171 In this work, we show how the abstract formalism of quantum theory can be deduced solely from t

172 The connections with the Mori-Zwanzig formalism of statistical physics are discussed, as well

173 ass of self-assembly problems, and using the formalism of stochastic thermodynamics, we derive a set

174 variational model in terms of a generalized formalism of the capillarity scaling theory that assumes

175 In addition, we present a projection formalism of the Mori-Zwanzig type that is applicable to

176 begin by summarizing the basic thermodynamic formalism of thermoelasticity.

177 However, the mathematical formalism of these mechanisms makes them difficult to co

178 edictable using the preferential interaction formalism of Timasheff.

179 hich cannot be modeled with the conventional formalism of transmission matrices.

180 -linear Schrodinger equation and needs a new formalism of wave kinetics, developed here.

181 This work develops formalisms of size-topology correlation that are very ge

182 matical representations (based on a discrete formalism) of biological regulatory mechanisms in a modu

183 the Onsager and Machlup action minimization formalism on each side of the transition, thus replacing

184 On the basis of a recent formalism on the dynamics of metal uptake by complex bio

185 onditional Gaussian Bayesian network (CGBNs) formalism, one appropriate for predicting an outcome of

186 hese relations, in turn, are modeled using a formalism originally developed to treat electron and oth

187 cal modeling and employing the Fokker-Planck formalism, our mathematical analysis suggests that incre

188 was accounted for via the integral equation formalism polarizable continuum model (IEF-PCM) at the H

189 ctrode and a redox couple, the Butler-Volmer formalism predicts that the operative heterogeneous rate

190 Several formalisms propose that a representation of noisy eviden

191 Here we build on the mathematical formalism provided by QIT to formulate the quantum H-the

192 The formalism provides a mechanistic insight into electronic

193 This flexible formalism provides an accessible approach for narrowing

194 New structural analysis methods, and a tree formalism re-define and expand the RNA motif concept, un

195 orrectly predicted by a simple thermodynamic formalism relating the oxidation potentials and pKa valu

196 combinations with the sum-over-states (SOS) formalism revealed that the enhancement is due to the st

197 l-free and reduced spectral density function formalisms revealed no evidence of contiguous stretches

198 This modified formalism should be taken into account when designing ma

199 g RET was derived and an assay based on this formalism, spectral RET (sRET), was developed.

200 The developed formalism stresses the importance of characterizing nons

201 hes have been widely used for reaction-based formalisms such as SBML.

202 Furthermore, RImmPort supports open formalisms, such as CDISC standards on the open source b

203 0.2 mM according to the Eyring and Arrhenius formalisms suggested that the quantum mechanical nature

204 We can accurately model them by a new formalism, taking into account both the gravity changes

205 ons based on the local-density-approximation formalism, taking into account Coulomb interaction U (LD

206 cal signal, we introduce here a mathematical formalism that (i) accounts for intrinsic changes that i

207 American Chemical Society, provided a simple formalism that allowed investigators to understand fluor

208 different functional phases of the cycle, a formalism that allows the model to be directly compared

209 Here, we develop a theoretical formalism that can accommodate diverse stimuli and behav

210 moothed l(1)-regularized logistic regression formalism that can be cast as a standard convex-optimiza

211 Here we introduce a formalism that can generate optimizers automatically by

212 f allostery in the context of a quantitative formalism that can reconcile biochemical and biophysical

213 r monomeric alpha-synuclein using a Bayesian formalism that combines data from NMR chemical shifts, R

214 This paper summarizes the scientific formalism that created modern neurology, demonstrates ho

215 s are commonly analyzed using a site binding formalism that includes a parameter, the Hill coefficien

216 les; (b) it uses a parallel constraint-based formalism that is nondirectional; (c) it treats words an

217 HSM we try to propose a hybrid system based formalism that is still sufficiently powerful for descri

218 Here I present novel formalism that more finely partitions the universe of po

219 Using a recently introduced formalism that represents heterogeneous local Ca2+ using

220 The kinetic formalism that we discuss can describe the cotranslation

221 rectify this using an angular effective mass formalism that we have developed.

222 ified via the parametrized diastolic filling formalism that yields relaxation/viscoelastic (c) and pa

223 mbinatorial cis-regulation and in generating formalisms that accurately predict gene expression from

224 f all possible states and towards rule-based formalisms that allow for implicit model specification,

225 methods based on less effective statistical formalisms that are sensitive to spurious signals in the

226 FAIMS separations in mixtures, derived from formalisms that determine high-field mobilities in heter

227 According to the MIRD committee formalism, the mean absorbed dose to a target is given b

228 By using self-consistent six-band k.p band formalism, the nitride active region consisting of 30 A

229 We present a concept and formalism, the string graph, which represents all that i

230 emented for the three popular types of model formalisms: the LSODA algorithm for ODE integration, the

231 ased systems is the knowledge representation formalisms they use.

232 addition, the potential utility of the same formalism to (1)H-(1)H cross-relaxation rates is conside

233 guities inherent in transferring the quantum formalism to a less determined realm.

234 We apply the resulting formalism to a problem from molecular dynamics and show

235 ned with a self-consistent Poisson-Boltzmann formalism to account for ion charge screening in solutio

236 isotropic reorientational eigenmode dynamics formalism to analyze our simulation trajectories, we rep

237 We applied a thermodynamic formalism to assess the effect of weakly interacting TM

238 choice of an appropriate clear thermodynamic formalism to be used by an interdisciplinary scientific

239 ticle, we use a multiscale nonlinear optical formalism to bring theoretical evidence that anisotropy

240 We apply this formalism to compute the optimal parameters of low-thres

241 We present the proposed formalism to construct coarse-grained potential models f

242 e we use the invariant variational bicomplex formalism to derive the first equilibrium equations for

243 y provide sufficiently powerful mathematical formalism to describe biological processes of interest a

244 Here we present a kinetic formalism to describe cotranslational folding and predic

245 r dynamics simulations, and we propose a new formalism to describe edge functional groups.

246 suggests the adequacy of the Stokes-Einstein formalism to describe RAPs.

247 Here, we use the kinetic theory formalism to describe the dependence of the FRET efficie

248 In this paper we develop a new formalism to detect the equilibrium regimes of an unbran

249 Here we present a mean-field formalism to estimate the packing density of axisymmetri

250 ng molecular dynamics with a master equation formalism to explain the steady drop in CO diffusion rat

251 an accurate and truly predictive theoretical formalism to explore this remote possibility when intens

252 al groups and thus it provides an ecological formalism to help interpret the present surge in microbi

253 We apply our formalism to models of the inositol trisphosphate recept

254 the Keldysh nonequilibrium Green's function formalism to obtain insight into the quantum dynamics of

255 algorithm that extends the Flory-Stockmayer formalism to overcome the limitations of analytic theori

256 We demonstrate the application of this formalism to paramagnetic relaxation enhancement vectors

257 -wise fitting approach, using a mathematical formalism to phenomenologically describe local calcium t

258 estable extension of the quantum probability formalism to psychophysical measures, such as detectabil

259 The mathematical formalism to quantitatively describe the phenomena is al

260 We used the Woodhull-Eyring formalism to rationalize the values measured for the ass

261 Here we develop a theoretical formalism to show that a three-dimensional topological i

262 We use the product operator formalism to show that this oscillatory behavior arises

263 We propose a graph-theoretical formalism to study generic circuit quantum electrodynami

264 entalists, applications of the Butler-Volmer formalism to systems that are more properly described us

265 We extend here this formalism to the case of the Abeta40 peptide, a 40-resid

266 nal protocol applying the binding polynomial formalism to the constant pH molecular dynamics (CpHMD)

267 dients, we extend the classic Hodgkin-Huxley formalism to uncover a unification of neuronal membrane

268 riment are harnessing the power of landscape formalisms to describe quantitatively the mechanics of f

269 In this work, we combine a logic-based formalism, to describe all the possible regulatory struc

270 periments is related, via the kinetic method formalism, to the enantiomeric composition of the chiral

271 rediction is derived by the Two-State-Vector-Formalism (TSVF) for a particle superposed over three bo

272 The statistical formalism underlying our approach facilitates supervisin

273 discrete-time models show that the standard formalism used by population genetics ignores forced cha

274 ed with the reduced spectral density mapping formalism using assumed values of the chemical shift ani

275 ted based on 111In imaging data and the MIRD formalism using patient-specific organ masses determined

276 A formalism was developed to consistently parameterize the

277 Jones formalism was extended to nonlinear optics and was used

278 Using this formalism we derive results connecting the stability of

279 Thus, the formalism we develop is suitable for describing and pred

280 The QR formalism we use is an abstraction of ODEs.

281 Using the generating functions formalism, we analytically solve all the models in the l

282 Using this formalism, we analyze 15 empirical fitness landscapes of

283 By resorting to an expanded-ensemble formalism, we are able to determine the free energy requ

284 By adopting a hidden-dynamical-systems formalism, we expressed parameter estimation as an infer

285 Using a Fokker-Planck formalism, we find no evidence for a feedback mechanism

286 Utilizing the matched molecular pair formalism, we have analyzed patterns of compound promisc

287 oying a plane-wave density functional theory formalism, we investigate the dielectric response of hig

288 operative transition following heteropolymer formalism, whereas secondary structure formation takes p

289 um entropy principle to derive a tensor-free formalism which allows for direct, dynamic analysis of R

290 laxation data is analyzed using a model free formalism which takes into account the very high anisotr

291 This formalism, which can also be extended to the flowing ins

292 he structures are estimated using a Bayesian formalism, which provides measures of uncertainty in the

293 ons by combining the standard quasi-chemical formalism with a detailed-balance description that is ap

294 ocess that combines a recombination modifier formalism with a gene-regulatory network model.

295 k that combines the standard genetic linkage formalism with whole-genome molecular-interaction data t

296 species in solution were computed using both formalisms with the Oldham-Zoski approximation.

297 This formalism, with its consequent reinforcement and/or inte

298 ed PC12 cells) in light of the heterogeneous formalism yielded independent estimates for the associat

299 be fitted with a Henderson-Hasselbalch-type formalism, yielding pK(a)(2) values of 6.96 +/- 0.04 and

300 he RP equation with CNT based on the Kramers formalism yields an analytical expression for the cavita