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1 xtensively in terms of both gene content and gene sequence.
2 and finding the least-repetitive synonymous gene sequence.
3 ndependent of genomic locus, gene length and gene sequence.
4 identified only from their 16S ribosomal RNA gene sequence.
5 ied to any protein drug based on a conserved gene sequence.
6 ed within 36 of the differentially expressed gene sequences.
7 ure and functional interactions of these RNA gene sequences.
8 thin Rpb1--induces transcription of silenced gene sequences.
9 ween the single guide RNA and the non-target gene sequences.
10 sirtuin 1 or sirtuin 2, onto GluA1 and GluA2 gene sequences.
11 and 0.7 +/- 0.2 despite a high similarity in gene sequences.
12 llumina) sequencing of partial (V4) 16S rRNA gene sequences.
13 ic classification of any phylogenetic marker gene sequences.
14 ds for each gene, to parameters derived from gene sequences.
15 ic) mutations at numerous non-immunoglobulin gene sequences.
16 eeks of life were analyzed by using 16S rRNA gene sequencing.
17 fied to the species level using housekeeping gene sequencing.
18 s in the bone marrow using flow cytometry or gene sequencing.
19 All protozoa were identified by 18S rRNA gene sequencing.
20 ) disruption experiments and variable region gene sequencing.
21 00 d using qPCR and high-throughput 16S rRNA gene sequencing.
22 ridization copy number profiling and deep AR gene sequencing.
23 ns using whole-exome sequencing and targeted gene sequencing.
24 cal analysis of muscle biopsy, and candidate gene sequencing.
25 olled trial was determined by using 16S rRNA gene sequencing.
26 Samples were analyzed by 16S ribosomal RNA gene sequencing.
27 osatellite instability, PTEN status, and 487-gene sequencing.
28 and 150 days of age was assessed by 16S rDNA gene sequencing.
29 anges, including both direct counts and rRNA gene sequencing.
30 tide modification steps, followed by PCR and gene sequencing.
31 by phenotypic tests, mass spectrometry, and gene sequencing.
32 ass spectrometry (MALDI-TOF MS) and 16S rRNA gene sequencing.
33 , identified using whole exome and candidate gene sequencing.
34 stoma fasciculatum) using large subunit rRNA gene sequencing.
35 E), polymerase chain reaction, and pertactin gene sequencing.
36 ment and 5 days after treatment for 16S rRNA gene sequencing.
37 ommunities were characterized using 16S rRNA gene sequencing.
38 rol subjects were profiled by using 16S rRNA gene sequencing.
39 microbiota by 16S ribosomal ribonucleic acid gene sequencing.
40 y and weekly during gestation using 16S rRNA gene sequencing.
41 e isolated from biopsies and analyzed by 16S gene sequencing.
42 no deleterious mutations in any of the eight genes sequenced.
43 159 case patients who had an HIV type 1 pol gene sequence, 157 (98.7%) had sequences that were highl
46 Owing to divergent 16S ribosomal RNA (rRNA) gene sequences, 50-100% of organisms sampled from specif
47 rm led to recovery near-full-length 16S rRNA gene sequences allowing accurate identification of micro
48 microbiota by culture and 16S ribosomal RNA gene sequencing.Among the 3161 enrolled preterm infants,
49 n the infected mouse GI tract using 16S rRNA gene sequence analysis of bacterial DNA prepared from in
52 me in a plant pathology study, we discovered gene sequence and gene expression variants across a gene
54 uestion, ABL capabilities are encoded by its gene sequence and that molecular blueprint designs this
56 the conserved off-target free partial HaCHI gene sequence and was used to generate several HaCHI-RNA
57 Initiative (6,177 near full-length 16S rRNA gene sequences and 9.4 million high-quality 16S V1-V2 am
59 to identify the most phylogenetically unique gene sequences and molecules associated with these genes
60 ngival microbiome was evaluated via 16S rRNA gene sequencing and 8 selected inflammatory markers meas
63 were identified by 16S ribosomal RNA (rRNA) gene sequencing and compared with validly described spec
67 pa zea larvae using 16S ribosomal RNA (rRNA) gene sequencing and matrix-assisted laser desorption/ion
68 nt ID and mecA results were resolved by rpoB gene sequencing and mecA gene sequencing, respectively.
70 ected at all locations tested using 16S rRNA gene sequencing and quantification of hydrazine oxidored
75 rium were identified by rpoB, sodA and hsp65 gene sequencing and strain typed using variable number t
76 (as defined by their unique T cell receptor gene sequence) and by tracking clones that enter the mem
77 C. difficile-positive samples using 16S rRNA gene sequencing, and C. difficile was detected in 86.3%
80 taxonomic level by secA1 analysis, 16S rRNA gene sequencing, and matrix-assisted laser desorption io
81 s well, many research assays, including PCR, gene sequencing, and melt curve analysis, have been deve
82 (qPCR) from a research laboratory, 16S rRNA gene sequencing, and metagenomic shotgun sequencing (MSS
83 ultured colonies were identified by 16S rRNA gene sequencing, and purity was confirmed by sequencing
85 ols to query, mine and visualize large-scale gene sequences, annotations and transcriptome profiles.
87 Single-nucleotide polymorphisms (SNPs) in a gene sequence are markers for a variety of human disease
89 ts, but analyses of liver histology and full gene sequencing are required to identify patients with r
90 entified differences in cpsM, cpsO, and cpsI gene sequences as responsible for the differentiation be
91 bial composition was assessed using 16S rRNA gene sequencing at three specific time periods (baseline
95 t digestive tract were subjected to 16S rRNA gene sequencing-based analysis to determine the baseline
96 st co-evolution is imprinted within promoter gene sequences before transcript or protein interactions
97 rate knockout mouse models by disrupting the gene sequence, but its efficiency for creating models th
99 y, allowing a reduction of mosquito 18s rRNA gene sequences by more than 80% for the V4 hypervariable
102 10(1) copies of Salmonella typhimurium InvA gene sequences (cloned in E. coli and after 30-cycle PCR
103 ore resistant AOB and NOB sharing functional gene sequences close to those of, respectively, Nitrosom
107 rsity studies using small subunit (SSU) rRNA gene sequences continue to advance our understanding of
108 umour DNA encoding the clonal immunoglobulin gene sequence could be detected in the serum of patients
109 hesized that the use of ultra-deep, targeted gene sequencing could detect somatic mutations in uterin
110 ed second hypervariable region (330 bp) of G-gene sequence data (global, n = 483; and Ontario, n = 60
111 eams, we predicted metagenomes from 16s rRNA gene sequence data using PICRUSt and identified function
112 ores, DACE clustered the Lake Taihu 16S rRNA gene sequencing data ( approximately 316M reads, 30 GB)
113 min, and the Ocean TARA Eukaryotic 18S rRNA gene sequencing data ( approximately 500M reads, 88 GB)
114 nalyze host transcriptomic data and 16S rRNA gene sequencing data from paired biopsies from IPAA pati
115 associated with coronary heart disease using gene sequencing data from the Myocardial Infarction Gene
116 yses of urine metabonomics data and 16S rRNA gene sequencing data to investigate the functional relat
122 sfers on CM and H2 , Acetobacterium 16S rRNA gene sequences dominated the culture and the DCM-degrade
123 cular epidemiology studies analyse viral pol gene sequences due to their availability, but whole geno
124 e show evidence of convergent evolution of G gene sequence duplication and fixation over time, which
127 taxonomic classification tools for 16S rRNA gene sequences either do not provide species-level class
129 imeric protein selected from native envelope gene sequences (envs) induced neutralizing Abs against T
130 it can be difficult to assign identities to gene sequences, especially from non-model organisms.
131 he evaluation of the impact of metabolism on gene sequence evolution and show that it is possible to
132 a given gene family; this pipeline can model gene sequence evolution, gene duplication-loss, gene tra
133 ity lipoprotein cholesterol (after candidate gene sequencing excluded known genetic causes for high l
134 are ubiquitous, but the discovery of new RNA gene sequences far outpaces the research on the structur
135 Our method fully takes into account the gene sequence features and the miRNA and mRNA expression
136 We integrated the exome data with targeted gene sequencing for 1,321 genes selected for their invol
137 onomic unit [OTU] abundances) using 16S rRNA gene sequencing for co-occurring Plethodon salamander sp
138 ular and subcellular levels is complementing gene sequencing for pathway discovery and metabolic engi
139 was directly compared with that of 16S rRNA gene sequencing for the evaluation of 297 mycobacteria i
140 queried to extract the 53 ribosomal protein gene sequences from 44 genomes from diverse species.
141 ferent subunits) and 5250 miRNA, 3747 snRNA, gene sequences from 9282 complete genome chromosomes of
146 in multiple hosts are in fact different, but gene sequences from formally described species remain a
149 ss clustering to reconstruct full-length 16S gene sequences from metagenomic sequencing data with hig
152 n to be encoded by a multitude of synonymous gene sequences, has an important role in regulating prot
154 ygmaea and Roccella fuciformis with SSU rRNA gene sequences identical to the type strain of Streptomy
156 me housed Micromonospora, and using 16S rRNA gene sequence identification, we verified that the reiso
157 ing negative for BRCA1/2 mutations, multiple-gene sequencing identified 16 potentially pathogenic mut
160 cterial flow cytometry coupled with 16S rRNA gene sequencing (IgA-Seq) in murine models of immunodefi
162 x gene expression and binds Col3a1 and Postn gene sequences in cultured cardiac fibroblasts after ind
163 compared and analysed the homologous coding gene sequences in genomic and transcriptomic data from 2
164 first realizes the access to full-length 16S gene sequences in the near-terabase-scale metagenomic sh
166 dy, we profile gut microbiota using 16S rRNA gene sequencing in 531 well-phenotyped Finnish men from
167 d, we profiled gut microbiota using 16s rRNA gene sequencing in a panel of 110 diverse inbred strains
168 in an sbds-negative SDS family and candidate gene sequencing in additional SBDS-negative SDS cases or
169 Oral bacteria were assessed using 16S rRNA gene sequencing in prediagnostic mouthwash samples from
170 sequencing, Zap-70 methylation, and targeted gene sequencing in these patients are identical at basel
173 in resistance was detected in 3 eyes by rpoB gene sequencing, in 3 eyes by the MTBDRplus assay, and i
174 leted and 29 polymorphisms were found in the gene sequence, including two novel exonic mutations: R25
175 vo function of beta-actin is provided by the gene sequence independent of the encoded protein isoform
176 from the order Chlorobiales prevailed, with gene sequences indicating members of the genera Chlorobi
177 tracts used for transcribing and translating gene sequences into proteins as well as the products of
179 e the bacteria with high-resolution 16S rRNA gene sequencing, linking these community data to geochem
180 (LAMP) assays targeting the L. loa-specific gene sequences LLMF72 and LLMF342 were developed for the
181 ressive in MPn metabolism and their 16S rRNA gene sequences matched 35% of the Illumina PMEZ Pseudomo
182 However, these results suggest that multiple-gene sequencing may benefit appropriately selected patie
184 broad range of applications such as targeted gene sequencing, metagenomics, small genome sequencing a
185 design, and a workflow of 16S ribosomal RNA gene sequencing methodology, primarily for investigators
193 analysis of HAdV-D capsid genes, fiber knob gene sequences of HAdV-D types associated with EKC forme
194 Minimal polymorphism was detected in BmAMA1 gene sequences of parasite isolates from six babesiosis
197 h FVIII2194-2213 T-cell receptor beta (TCRB) gene sequencing of 15 T-cell clones from the severe HA s
200 o detected by using high-throughput antibody gene sequencing of blood samples, nasal mucosal samples,
207 e genetic group, based on hemagglutinin (HA) gene sequences, of influenza A(H3N2) viruses from patien
209 ormed genetic linkage analysis and candidate gene sequencing on 13 patients from a large consanguineo
212 breaks on the basis of the nucleoprotein (N) gene sequence only, as the diversity of circulating MeV
213 d to a number of key findings: (i) VH and VL gene sequences pair in a combinatorial fashion without d
214 probes were designed to detect a specific L-gene sequence present in the five most common Ebola spec
215 ptomyces, strain de-replication based on SSU gene sequences prior to screening for bioactive molecule
218 tive abundance of C. difficile from 16S rRNA gene sequencing (r(2) = -0.60) and MSS (r(2) = -0.55).
219 PCRs and a telomere-sequence to single-copy-gene-sequence ratio method to determine telomere length
220 valuation of pyrosequencing-derived 16S rRNA gene sequences recovered from incubations revealed the d
221 matically survey primer fidelity in SSU rRNA gene sequences recovered from over 6,000 assembled metag
222 Species-level classification for 16S rRNA gene sequences remains a serious challenge for microbiom
226 sedimentation, as many prokaryotic 16S rRNA gene sequences retrieved from the extracted DNA are phyl
228 ed genus-specific primers targeting 16S rRNA gene sequences revealed the presence of a Dehalogenimona
234 d by whole-genome amplification and 16S rRNA gene sequencing revealed previously unrecognized interac
236 primary uRCC, incorporating targeted cancer gene sequencing, RNA sequencing, single-nucleotide polym
238 t of CRISPR loci and cas (CRISPR-associated) genes: sequence segments of invaders are incorporated in
239 ilocus sequence analysis (MLSA) and 16S rRNA gene sequence showed that most equine isolates could als
241 enrichment shared 98.6%, and 98.5% 16S rRNA gene sequence similarities to Sulfurospirillum multivora
242 . azotoformans NBRC 15712(T) (96.3% 16S rRNA gene sequence similarity) is the closest Bacillus specie
244 have seldom been applied to microbial marker gene sequencing studies, which have mostly relied on nov
245 ustering analyses of microsatellite and Chd1 gene sequences support two divergent clusters separating
246 e forma specialis harbour identical effector gene sequences, supporting horizontal transfer of geneti
249 The other splice site is co-opted from the gene sequence that is duplicated upon transposon inserti
251 yotic genome projects have reported multiple gene sequences that were much more similar to homologues
252 3-3 and tau proteins, and together with PRNP gene sequencing the test allows the major prion subtypes
253 thod comprised of urine culture and 16S rRNA gene sequencing, the sensitivity, specificity, positive
254 protected from MazF activity by recoding the gene sequence to eliminate recognition sites, while pres
255 ut collections are invaluable for connecting gene sequence to function, yet traditionally, their cons
256 enable bacterial and archaeal ribosomal RNA gene sequences to be followed across multiple studies an
257 t-generation Illumina sequencing of 16S rRNA gene sequences to characterize symbiont communities.
258 We used sets of barley and wheat orthologous gene sequences to compare discrete parts of the Ae. mark
260 microbiome research is moving from 16S rDNA gene sequencing to a more comprehensive genomic and func
261 gmental glomerulosclerosis were confirmed by gene sequencing to bear dominant-negative MC1R mutations
262 with positive results were subjected to rpoB gene sequencing to demonstrate rifampicin resistance.
263 ows, we used high-resolution 16S rRNA marker gene sequencing to examine outcomes in our mouse model o
265 anscriptomics, quantitative PCR and 16S rRNA gene sequencing to study the changes in community compos
267 001 Genomes Consortium, we characterize rRNA gene sequence variation within and among accessions.
269 grams, basecaller software frequently missed gene sequence variations or could not identify variant b
270 eases, yet it has been difficult to identify gene sequence variations that underlie this heritability
273 ulating EBV latent membrane protein 1 (LMP1) gene sequences was observed between cellular and oral wa
274 (VWF) laboratory testing and full-length VWF gene sequencing was performed for all index cases and he
276 -control strategy for this disease, 16S rRNA gene sequencing was used to assess the microbial communi
280 he complementary determining region 3 (CDR3) gene sequence, we found no significant differences in th
281 thousands of shared single-copy orthologous gene sequences, we fully reconstruct, for the first time
285 icant isolates from the VGS group by16S rRNA gene sequencing, we identified 14 S. tigurinus isolates
286 gosity mapping and whole-exome and candidate gene sequencing, we identified ten families carrying six
287 ampled per species whereas, with advances in gene sequencing, we now have access to multiple samples
288 The HBV basal core promoter and precore/core gene sequences were also evaluated in subjects with and
296 he anode of all three SAPs based on 16S rRNA gene sequencing were Geobacter, Smithella and Syntrophob
298 The set of cold genes, which were 21% of the genes sequenced, were further winnowed down by examining
299 tor tube (MGIT) were confirmed by using rpoB gene sequencing, which raised the sensitivity of Xpert M
300 Resistance to pyrazinamide was assessed by gene sequencing with the detection of resistance-conferr
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