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1 uantities of subgenomic RNAs, in addition to genomic RNA.
2 e the infectivity of transfected coronavirus genomic RNA.
3 f a 5'-GCCAGCC-3' motif present in the viral genomic RNA.
4 rotein (N) associates tightly with the viral genomic RNA.
5 anslated from mRNA produced from replicating genomic RNA.
6 ES) of the encephalomyocarditis virus (EMCV) genomic RNA.
7 virus particles resulting in release of the genomic RNA.
8 teady-state HCV protein expression and viral genomic RNA.
9 ible for replicating hepatitis C virus (HCV) genomic RNA.
10 ring of the conserved 5' and 3' ends of each genomic RNA.
11 cts as a primer for reverse transcription of genomic RNA.
12 rm an immature capsid and also package HIV-1 genomic RNA.
13 hat which occurs during the encapsidation of genomic RNA.
14 Pol proteins or are packaged into virions as genomic RNA.
15 confirmed that siRNA cannot degrade incoming genomic RNA.
16 RdRp and the 5'-terminal stem-loop of viral genomic RNA.
17 tein in the region directly interacting with genomic RNA.
18 ansferase, RdRp, and the 5' stem-loop of the genomic RNA.
19 of HIV to CD4 and triggering of TLR7 by HIV genomic RNA.
20 d targets within the hepatitis C virus (HCV) genomic RNA.
21 entails the selective encapsidation of viral genomic RNA.
22 cies was enriched to the same degree as Psi+ genomic RNA.
23 U is used as a primer to produce full-length genomic RNA.
24 ls, which resulted in decreased synthesis of genomic RNA.
25 ype 1, synthesize Gag and Pol from unspliced genomic RNA.
26 mulation but not with steady-state levels of genomic RNA.
27 uctural polyprotein precursor Gag with viral genomic RNA.
28 al RdRp pulls this helix open to release the genomic RNA.
29 he 3' untranslated region (UTR) of the viral genomic RNA.
30 he complex secondary structure of the target genomic RNA.
31 ens having 10-12 segments of double-stranded genomic RNA.
32 a single nucleocapsid protein and the viral genomic RNA.
33 ortion of unspliced MoMLV RNA that serves as genomic RNA.
34 th of knowledge acquired regarding the viral genomic RNA.
35 ctural polyprotein Gag associates with viral genomic RNA.
36 enables the confinement or compaction of the genomic RNAs.
37 about the organization of their encapsulated genomic RNAs.
38 oat protein (CP) encapsidate each of the BMV genomic RNAs.
39 interactions between the capsid and the BMV genomic RNAs.
40 A 20-nucleotide hairpin structure within the genomic RNA-2 hybridizes with RNA-1 to form a bimolecula
41 c-length mRNAs of vc sense were detected for genomic RNAs 3, 4, 7, and 8 but not for other RNA specie
44 complementary (vc)-sense strands of all WMoV genomic RNAs accumulated asymmetrically in infected whea
48 e viral RNA remains unspliced and is used as genomic RNA and as mRNA for the Gag and Pol gene product
49 d protein of hantaviruses encapsidates viral genomic RNA and associates with transcription and replic
50 trated the ability to specifically recognize genomic RNA and both viral and host proteins as it traff
51 ase Xrn1 likely loads on the 5' end of viral genomic RNA and degrades processively through approximat
52 ependent RNA polymerase replicates the viral genomic RNA and is a primary drug target for antiviral t
53 , instead, correlated with cleavage of viral genomic RNA and modulation of the host transcriptome.
59 get the translational machinery to the viral genomic RNA and provide a framework for modeling the arc
61 ociated gene 5 (MDA5) colocalized with viral genomic RNA and the nucleoprotein (N) as early as 6 h po
62 lementarity between the 3' terminus of viral genomic RNA and the nucleotides located in the vicinity
63 n the replication and selective packaging of genomic RNA and the transcription and translation of sub
65 ion by binding directly to both sites in the genomic RNA and, at least in part, by stimulating intern
66 oduced similar numbers of infection foci and genomic RNAs and formed virions in inoculated leaves as
68 Neutrophil RSV F, G, and N proteins, RSV N genomic RNA, and messenger RNA (mRNA) were quantified.
69 Viral ribonucleocapsids harboring the viral genomic RNA are used as the template for viral mRNA synt
72 frames present in the complementary sense of genomic RNAs are expressed through subgenomic- or near-g
73 the cytoplasm of eukaryotic cells, uses its genomic RNA as a template for both viral protein synthes
76 ssay demonstrated that synthesis not only of genomic RNA but also of its complement, the antigenome,
77 ranslation of the viral polyprotein from the genomic RNA, but all of the mutations that decreased in
78 ce in the dimer initiation site (DIS) of the genomic RNA, but that dimer is converted to a mature dim
80 uV P bind NC to participate in access to the genomic RNA by the viral RNA-dependent-RNA polymerase.
81 comprises a ribonucleoprotein complex of the genomic RNA coated by a nucleocapsid protein (N) and ass
82 The RNP core comprises the negative-sense genomic RNA completely coated by the nucleocapsid protei
83 ialized RNA synthesis machine comprising the genomic RNA completely encapsidated by the viral nucleoc
85 ion (3(') UTR) of turnip crinkle virus (TCV) genomic RNA contains a cap-independent translation eleme
87 mmunodeficiency virus type 1 (HIV-1) Gag and genomic RNA determinants required for encapsidation are
89 rphological changes in viral proteins and in genomic RNA dimer structures to yield infectious virions
90 also emphasize that many features of mature genomic RNA dimers can be reproduced in vitro using prop
91 ely focused on simplified in vitro models of genomic RNA dimers even though the relationship between
94 tage of assembly involving compaction of the genomic RNA driven by multiple RNA packaging signal-CP i
95 mutant RNAs derived from the parental viral genomic RNA during replication, have been described for
104 nted negative-strand RNA viruses comprises a genomic RNA encased within a nucleocapsid protein (N-RNA
106 ey viral polyproteins Gag and Gag-Pol and as genomic RNA for encapsidation into assembling viral part
108 experiments revealed that significantly more genomic RNAs for the nonfusogenic MHVs were detected in
109 al nucleotides (nt) of West Nile virus (WNV) genomic RNA form a penultimate 16-nt small stem-loop (SS
112 cilitates the export of unspliced retroviral genomic RNA from simple type-D retroviruses such as SRV-
113 indicated that TGB1 separated on a different genomic RNA from TGB2 and TGB3 could function in limited
114 zation of cis-acting elements present on Ty1 genomic RNA from the GAG region that control reverse tra
115 Therefore, the frequency of copackaging of genomic RNAs from two different viruses (heterozygous vi
117 and influenza virus mRNA and negative-strand genomic RNA (gRNA) accumulated to high levels at 8 h aft
118 gle copy of the maturation protein binds the genomic RNA (gRNA) and is required for attachment of the
120 on of the uncapped Barley yellow dwarf virus genomic RNA (gRNA) and subgenomic RNA1 (sgRNA1) is drive
121 omote internal expression of the CP from the genomic RNA (gRNA) both in vitro and in vivo An absence
123 vaccine vectors showed persistence of vector genomic RNA (gRNA) for at least 60 days in lymph nodes i
132 e Gag and Gag-Pol capsid proteins as well as genomic RNAs (gRNAs) packaged by Gag into virions underg
136 ynamics of primate and nonprimate lentiviral genomic RNAs (HIV-1 and feline immunodeficiency virus [F
137 port here the secondary structure of the HIV genomic RNA-human tRNA(Lys)(3) initiation complex using
139 iral transcription/replication, however, the genomic RNA in the nucleocapsid must be accessible by th
141 those from healthy infants, expressed RSV N genomic RNA, indicating uptake of whole virus; 17 of 20
142 5' and 3' untranslated regions of the viral genomic RNA, inhibition of DENV-vsRNA-5 led to significa
143 Translation of the hepatitis C virus (HCV) genomic RNA initiates from an internal ribosome entry si
146 ate that the NC-binding aptamers disrupt Gag-genomic RNA interaction and negatively affect genomic RN
150 l nucleocapsid protein is complexed with the genomic RNA, interacts with the viral membrane protein d
151 gulator of innate immunity using comparative genomics RNA interference screens in Caenorhabditis eleg
152 of innate immunity, we performed comparative genomics RNA interference screens in the nematode Caenor
153 screens and illustrate how combining cancer genomics, RNA interference, and mosaic mouse models can
156 lisation that retroviruses can convert their genomic RNA into DNA provided a route by which they coul
157 te immunity despite reverse transcription of genomic RNA into double-stranded DNA, an activity that m
159 mbrane-bounded protein lattice that recruits genomic RNA into the virus and forms the shell of a budd
160 argets.The mechanism underlying packaging of genomic RNA into viral particles is not well understood
165 human immunodeficiency virus type 1 (HIV-1) genomic RNA is necessary to produce the complete viral p
170 human immunodeficiency virus type 1 (HIV-1) genomic RNAs is genetically silent when identical RNAs a
172 o called psi-RNA, in the packaging domain of genomic RNA) is strongly affected by changes in ionic st
176 We hypothesized that the aptamers influence genomic RNA levels via perturbation of specific Gag-geno
178 that another factor(s) such as ORF1 or viral genomic RNA may be necessary for proper particle release
180 econd gag mRNA species that differs from the genomic RNA molecule by the absence of an intron in the
183 tructural proteins of one flavivirus and the genomic RNA of a heterologous strain can be assembled an
187 We inserted a full-length cDNA clone of the genomic RNA of the dicistrovirus Rhopalosiphum padi viru
188 same enzyme (RNase H) is required to remove genomic RNA of the RNA/DNA replication intermediate.
189 (SHAPE) to structural analysis of authentic genomic RNA of the xenotropic murine leukemia virus-rela
191 mutation in a critical 3' UTR hairpin in the genomic RNA of turnip crinkle virus did not directly int
199 RNA polymerase, 3Dpol, replicates the viral genomic RNA on the surface of virus-induced intracellula
202 en shown to interact with P bodies and viral genomic RNA, our data indicated that P bodies and HIV-1
203 y dependent on a cis-acting RNA element, the genomic RNA packaging enhancer (GRPE), found within the
206 ed sequence at the 5' terminus of hantaviral genomic RNA plays an important role in viral transcripti
211 to chaperone tRNA(3)(Lys) placement onto the genomic RNA primer binding site; however, the timing and
212 viral filaments are produced and loaded with genomic RNA prior to insertion into the plasma membrane.
214 short sequences (packaging sites) within the genomic RNA promote rapid and efficient assembly through
215 ysis of protein processing, cDNA production, genomic RNA protection, and sedimentation and by fluores
216 T7 RNA polymerase-mediated production of PV genomic RNA, PV polymerase-catalyzed primer extension, a
217 be a result of an imbalance in the N protein/genomic RNA ratio leading to incomplete encapsidation.
218 lymph node cells showed the highest mRNA-to-genomic-RNA ratios in B cells and dendritic cells (DCs),
219 ter assembling HIV-1 Gag has associated with genomic RNA, recruited critical host factors involved in
220 red after assembling Gag has associated with genomic RNA, recruited critical host factors involved in
221 these two motifs--only four nucleotides per genomic RNA--reduced packaging 100-fold, comparable to t
225 te that EILV is restricted both at entry and genomic RNA replication levels in vertebrate cells.
226 covalent linkage generated during the viral genomic RNA replication steps of a picornavirus infectio
231 We further demonstrate that the surrounding genomic RNA secondary structure influences frameshift ef
233 cleoprotein (N) encapsidates the three viral genomic RNA segments and plays a crucial role in viral R
235 iruses, while proteins encoded by additional genomic RNA segments displayed no significant homology w
236 intermolecular interaction between two viral genomic RNA segments of an avian influenza A virus using
238 cation strategy of BPMV RNA2, one of the two genomic RNA segments of this virus, and established an e
239 approach that simultaneously amplifies eight genomic RNA segments, irrespective of virus subtype.
240 virus (WMoV), an Emaravirus, contains eight genomic RNA segments, the most in a known negative-sense
243 assembled in these experiments with the sub-genomic RNAs show a layer of RNA density beneath the coa
244 n infected cells and virions and encapsidate genomic RNA species to form an NP-RNA complex that, toge
245 ation factor eIF3 and recognition of the HCV genomic RNA start codon, molecular interactions that lik
247 -infected tissue attenuated the level of the genomic RNAs, suggesting that they, or their precursors,
250 pt N-RNA interaction and abrogate both viral genomic RNA synthesis and N-mediated translation strateg
255 perative effects between capsid proteins and genomic RNA that would occur in a packaging signal-media
256 k of interactions with positive-strand viral genomic RNA, the envelope membrane protein (M), and othe
257 (tRNA(Lys)(3)) and a region at the 5' end of genomic RNA; the 3' end of the tRNA acts as a primer for
259 s type 1 (HIV-1) is reverse transcription of genomic RNA to DNA, a process that is primed by cellular
260 a chaperone for NP, which encapsidates viral genomic RNA to form the NP-RNA complex, the functional t
261 otein A cooperate to selectively recruit FHV genomic RNA to membranes where RNA replication complexes
262 Bp3 is thought to direct other viral MPs and genomic RNA to peripheral bodies located in close proxim
263 s demonstrate the structural basis for HIV-1 genomic RNA to recruit beneficial cellular cofactor to v
264 wn N-nsp3 interaction in the localization of genomic RNA to the replicase complex at an early stage o
265 enomic RNA interaction and negatively affect genomic RNA transcription, processing, or stability.
266 protein expression as well as subgenomic and genomic RNA transcription, were diminished during U0126
270 which preferentially associates with DENV-2 genomic RNA via interactions with dumbbell structures in
274 n (MB)-fluorescent probes to image the viral genomic RNA (vRNA) of human RSV (hRSV) in live Vero cell
276 reover, significantly higher levels of viral genomic RNA (vRNA) were observed during the heat shock p
277 we found that the levels of influenza virus genomic RNA (vRNA), but not the corresponding cRNA or mR
281 proviral DNA showed few mutations, the viral genomic RNA was highly mutated, suggesting that errors o
282 om 103 horses were immunoreactive, and viral genomic RNA was present in 8 of the 36 seropositive anim
283 was complementary to the 5' terminus of the genomic RNA, was effective against six strains of MHV.
284 Finally, using RNA probes specific for RSV genomic RNA, we found that viral RNA predominantly local
288 rus B3 strains with 5'-terminal deletions in genomic RNAs were isolated from a patient suffering from
290 of the plant virus brome mosaic virus (BMV) genomic RNAs when replication is reproduced in yeast cel
291 ific RNA detected in muscle is predominantly genomic RNA, whereas RABV RNA detected in draining lymph
292 '-terminal siRNAs of each of the three viral genomic RNAs, whereas an increased production of siRNAs
293 ications of the plasticity of this region of genomic RNA, which can also anneal with upstream sequenc
294 system also replicated the full-length TBSV genomic RNA, which resulted in production of subgenomic
295 in RNA packaging by encapsidating only their genomic RNA while avoiding packaging of the more abundan
296 clear envelope, and focal colocalizations of genomic RNA with an intact packaging signal (psi) and Ga
297 s, we identified multiple regions in the pre-genomic RNA with high affinity for core protein dimers.
298 ind that necroptosis requires sensing of the genomic RNA within incoming virus particles via cytoplas
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