ライフサイエンスコーパス: hairpin loop

1 around the conserved GPGRA apex of the beta-hairpin loop.

2 l regulatory sequence (TRS) is folded into a hairpin loop.

3 lease active site in the absence of the beta hairpin loop.

4 acts occur in the signaling domains near the hairpin loop.

5 ons from a flexible stretch of residues to a hairpin loop.

6 number of interactions, such as a stable DNA hairpin loop.

7 long C-terminal extension and an N-terminal hairpin loop.

8 ibosomal protein contains a conserved UUAAGU hairpin loop.

9 easing the stacking among nucleotides in the hairpin loop.

10 tive (zinc-binding) site, including the beta-hairpin loop.

11 ng from 5'-incision of an abasic site in the hairpin loop.

12 ing 5-iodoUMP positioned specifically in the hairpin loop.

13 atory effect on DNA ligation during BER in a hairpin loop.

14 the penultimate base pair than is the 5 base hairpin loop.

15 start site is at the start of this conserved hairpin loop.

16 G5 H2-A1O N7 and A10 NH6-G5 O2') closes the hairpin loop.

17 introducing a single-strand breakage in the hairpin loop.

18 ome extent with the hinge region near the P3 hairpin loop.

19 elices connected by an intervening 8-residue hairpin loop.

20 ll experimentally determined four-nucleotide hairpin loops.

21 zing the structure and thermodynamics of RNA hairpin loops.

22 with this affinity to regular A-form RNA or hairpin loops.

23 g-Phe-Phe pharmacophores are on exposed beta-hairpin loops.

24 epeats and covalently closed single-stranded hairpin loops.

25 y, as shown by the asymmetric opening of DNA hairpin loops.

26 a2 helix and the betaC-betaD and betaE-betaF hairpin loops.

27 s a common closing mismatch in ribosomal RNA hairpin loops.

28 therefore be common structural units of RNA hairpin loops.

29 three sequences joining the duplexes and two hairpin loops.

30 the thermodynamic stability of the C(UUCG)G hairpin loops.

31 tory miRNA binding and siRNA binding to mRNA hairpin loops.

32 tructural motifs such as internal, bulge and hairpin loops.

33 port even for base pairs, double helices, or hairpin loops.

34 ner that depends crucially on the myotrophin hairpin loops.

35 ntial base pairing between the two predicted hairpin-loops.

36 organization, follow the order: cruciform<or=hairpin<.

37 x alpha1, or either Lys-37 or Arg-33 in beta-hairpin loop-1, impairs binding of yeast eIF1 to 40 S.eI

38 ts are a purine located at the center of the hairpin loop (-11G) and a base at the hairpin stem (-8G)

39 ts specifically with the central base of the hairpin loop (-11G) and a base at the stem (-8G) and tha

40 orters, Thr-352 and Met-362 of the reentrant hairpin loop 2 are replaced by the smaller Ala and Thr,

41 ing and transport of glutamate suggests that hairpin loop 2 not only plays a role in the selection of

42 ped by an irregular loop and forms a central hairpin (loop 3).

43 0.9 min(-1) at pH 7.8) and substrates with a hairpin-loop 3' to the cleavage site (approximately 40 m

44 U-turn candidates occur in hairpin loops (34 times) as well as in internal and mult

45 The IRE six-nucleotide hairpin loop, 5'C1A2G3U4G5N6, is conserved in sequence,

46 For certain DNA hairpin loops, a CG closing base pair has enhanced stabi

47 The CD40 fragment binds as a hairpin loop across the surface of the TRAF domain.

48 domain helices demonstrate that the N-domain hairpin loop acts as a structural mediator of the allost

49 il dimerization of two symmetry-related stem-hairpin loops, adjacent strands which are antiparallel t

50 imensional combinatorial screening approach, hairpin loops (among a variety of RNA motifs) were the p

51 hairpin complex formed between the HIV-2 TAR hairpin loop and a hairpin with a complementary loop seq

52 tion and two conserved RNA motifs, an apical hairpin loop and a loop E.

53 rent, including increased ordering of a beta-hairpin loop and a shift of the SxN active site motif su

54 ructures involving the recognition of an RNA hairpin loop and an RNA tertiary structure, reveals the

55 The hairpin loop and bulged C have previously been assumed t

56 of the transporter and is held in place by a hairpin loop and by a salt bridge.

57 e structure, the relative stabilities of the hairpin loop and core quadruplex, and the ability to for

58 oop flanked on one side by a 2-bp stem and a hairpin loop and on the other side by a longer stem whos

59 ral motifs to recognize DNA sequences at the hairpin loop and stem and to unwind DNA.

60 netics on the sequence and the length of the hairpin loop and the helix stem.

61 ary structural elements are classified: 2104 hairpin loops and 3776 internal loops.

62 cally conserved secondary structure with two hairpin loops and a 3-way junction.

63 Tetraloops are the most frequent RNA hairpin loops and are often phylogenetically conserved.

64 This region bears the same sequences in the hairpin loops and four-arm junction as the short palindr

65 cers to investigate the expandability of DNA hairpin loops and the coupling between the loop and clos

66 orating modular 4-way junction (4WJ) motifs, hairpin loops and their cognate loop-receptors to create

67 o their propensity for forming complementary hairpin loops and their elevated mutation rates, tandem

68 ples, 14 occur in multi-stem loops, seven in hairpin loops and three in internal loops.

69 DC3 are composed of residues in the opposing hairpin loops and unwound portions of adjacent helices.

70 "thumb loop," which binds right into the RNA hairpin loop, and a 10 degree hinge movement of the C-te

71 s of different lengths, sequence identity of hairpin loop, and hairpin loop biotinylation at differen

72 The lysine is located atop a flexible hairpin loop, and it shifts into the minor groove upon D

73 g induces a conformational change around the hairpin loop, and the most specific compound recognizes

74 files were searched for internal, bulge and hairpin loops, and each loop's structural information, i

75 tructure motifs, including base-pair stacks, hairpin loops, and internal loops, using their statistic

76 es that are common to other RNA internal and hairpin loops, and molecular recognition principles comm

77 presented to mini-vRNAP in the context of a hairpin loop, appears to interact with mini-vRNAP Trp-12

78 s, selected basic amino acid residues in the hairpin loop are not critical for heparin binding, altho

79 ge, and three residues in the six-nucleotide hairpin loop are quite dynamic in this RNA.

80 additional evidence that small, fast folding hairpin loops are characterized by a rugged energy lands

81 Hairpin loops are critical to the formation of nucleic a

82 Many hairpin loops are expanded versions of smaller, stable o

83 es composing the predicted III-A and SUR-III hairpin-loops are crucial for optimal RNA accumulation a

84 C(4) oligonucleotide, mimicking the unfolded hairpin loop, are consistent with a right-handed A-form-

85 uclei has been proposed to possess a unique "hairpin-loop" arrangement, which is hypothesized to aid

86 e predominant and alternate conformations of hairpin loops, as shown in the most well represented tet

87 iation point mapped to a sequence within the hairpin loop at one end of the VACV genome and to the sa

88 tains a helix around the cleavage site and a hairpin loop at the corresponding position of the T stem

89 ion bound with high affinity to an extended hairpin loop at the dimerization interface.

90 ree single-stranded regions, consisting of a hairpin loop at the end of P3 and two sequences joining

91 ts own, the extended NTD protein has no beta-hairpin loop at the N terminus of CA and that the molecu

92 haeroides groESL1 operon contains a putative hairpin loop at the start of the transcript that is pres

93 Phe(523), positioned in a beta-hairpin loop at the subunit interface, plays a key role

94 To explore the possibility that the hairpin loop at the tip of the trimer contact region mig

95 y an endonuclease into a linear DNA with two hairpin loops at its ends.

96 ical strategy to encourage formation of beta-hairpin loops because natural sequences are often unstru

97 lete bevacizumab binding site, including the hairpin loop (beta5-turn-beta6) and the structure-suppor

98 Furthermore, PgaB310-672 contains a beta-hairpin loop (betaHL) important for binding PNAG that wa

99 are the first to examine small molecule-RNA hairpin loop binding in detail and are a necessary step

100 into the minor groove of a helix, and a GAAA hairpin loop binds to a conserved 11-nucleotide internal

101 gths, sequence identity of hairpin loop, and hairpin loop biotinylation at different loop residues on

102 three nucleotides on the 3' side of the RNA hairpin loop by (ethylene glycol)6-18 spacers does not s

103 s in the structure are constrained to form a hairpin loop by the single disulfide bond in amylin.

104 s self-complementary sequence able to form a hairpin loop, by replacing dC with N:4-ethyldeoxycytidin

105 ssential platform upon which a stable d(GNA) hairpin loop can fold and that this loop can undergo 3'-

106 We have previously shown that BER in a TNR hairpin loop can lead to removal of the hairpin, attenua

107 ing of tryptophan 49, at the tip of the beta-hairpin loop, changes from a low value characteristic of

108 UG have approximately the same stability as hairpin loops closed by AU/UA base pairs, while the loop

109 For hairpin loops closed by GU base pairs, the DeltaG degree

110 t of a model for predicting the stability of hairpin loops closed by GU base pairs.

111 Hairpin loops closed by UG base pairs are on average 1.3

112 The hairpin loops closed by UG have approximately the same s

113 ously developed to predict the stability for hairpin loops closed by Watson-Crick base pairs, allow f

114 approximately 0.7 kcal/mol more stable than hairpins loops closed by GC/CG base pairs.

115 f the N terminus and adjoining transmembrane hairpin loop compared with PheP in a PE-containing strai

116 wo closely related structures and the unique hairpin loop conformation are specific to the P1G4 seque

117 ther, the domino effect and the altered beta-hairpin loop conformation explain how IMP-6 can evolve t

118 ns reveal that Met(73)influences beta3-beta4 hairpin loop conformation, whereas its substitution affe

119 A negative-charge-enriched hairpin loop connecting S5 and the pore helix is positio

120 To test whether this hairpin loop constitutes an ankyrin-binding site on cdb3

121 For 1, the preferred hairpin loops contain an adenine separated by at least t

122 For 2, the preferred hairpin loops contain both 5'GC and 5'CG steps (two-tail

123 ains a single ("lone") base-pair capped by a hairpin loop containing three nucleotides.

124 RNA hairpin loops containing a GNRA consensus sequence are t

125 ab compared the folding of small DNA and RNA hairpin loops containing a sheared GA pair.

126 Specifically, each hairpin loop contains a U-turn motif, but only SLV shows

127 The seven-nucleotide hairpin loop contains the high-affinity hnRNP-A1-respons

128 lates into a closing down movement of a beta-hairpin loop covering the active site.

129 following model to predict the stability of hairpin loops: delta G degree 37L(n) = delta G degree 37

130 ly developed to predict the stability of RNA hairpin loops: DeltaG degrees (37L(n) = DeltaG degrees (

131 in the model to predict the stability of RNA hairpin loops: DeltaG degrees (37L(n) = DeltaG degrees (

132 eine-knot motifs in both subunits create two hairpin loops, designated L1 and L3, on one side of the

133 m8 mapped to a missense mutation in the RHD3 hairpin loop domain, causing accumulation of the mutant

134 edicted to form a curvature-inducing/sensing hairpin loop domain.

135 Two hairpin-loop domains in cystatin family proteinase inhib

136 diate and specifically by the closure of the hairpin loop driven by formation of two native backbone

137 In putative hairpin loops, EMF10A and EMF10B contained CKKGRGDNLNDYC

138 The kinetics of DNA hairpin-loop fluctuations has been investigated by using

139 ing a 5' exonuclease and the other featuring hairpin loop formation and an endonuclease.

140 mplementarity estimation and intra-molecular hairpin loop formation.

141 ces (e.g. (CAG)(16)(CTG)(4)), we resolve all hairpin loops formed and measure their slippage and expa

142 asmic domain and a construct containing the "hairpin loop," formed by the second and third membrane-s

143 PTPRG composed primarily of an extended beta-hairpin loop found in both PTPRG and PTPRZ.

144 is similar to the GU closing pair of the 690 hairpin loop found in E. coli 16S rRNA.

145 (3) A beta-hairpin loop found in MogA is absent from Geph-G and Cnx

146 , including an amino-terminal segment with a hairpin loop, four kringle domains, and a serine proteas

147 to plasminogen, including an amino-terminal hairpin loop, four kringle domains, and a serine proteas

148 a-Phe-DPro], comprised the hexa-peptide beta-hairpin loop from AGRP cyclized through a DPro-Pro motif

149 The removal of an autoinhibitory beta-hairpin loop from genotype 2a HCV NS5B increases de novo

150 Herein, we report the RNA hairpin loops from a six-nucleotide hairpin library that

151 Hairpin loops from c-src and GABAA gamma2 pre-mRNAs and

152 In MoMLV, a hairpin loop functioning as a dimer linkage structure (D

153 The hairpin loop GUAAUA occurs frequently in ribosomal RNA.

154 arious kringle domains or the amino-terminal hairpin loop had various effects in the multiple assays.

155 The thermodynamic stability of RNA hairpin loops has been a subject of considerable interes

156 In 1 M NaCl, the eight-nucleotide RNA hairpin/loop has the most favorable folding free energy

157 The latter contains potential hairpin loops, 'hinge' elements and the promoters for tr

158 d secondary structure of SP genomic RNA: (i) hairpin loops; (ii) hairpin stems; and (iii) the 5' regi

159 We show that deleting the beta hairpin loop in RB69 gp43 affects neither polymerase nor

160 s from a previous X-ray structure to model a hairpin loop in TAR, the best-fit RDC assignment solutio

161 According to the deadbolt model, a hairpin loop in the beta3 tail domain could act as a dea

162 e ankyrin binding site was located on a beta-hairpin loop in the cytoplasmic domain.

163 The results suggest that an extended beta-hairpin loop in the endonuclease domain that contains re

164 The sequence differences in a beta-hairpin loop in the kinase domain causes a translational

165 with the nucleotides encoding the 11-aa beta-hairpin loop in the mouse Slc4a1 gene replaced with sequ

166 isms involve formation of a quasipalindromic hairpin loop in the template and dissociation of DNA pol

167 A unique beta-hairpin loop in the thumb subdomain may play an importan

168 "zipper" complex, or nucleation through the hairpin loops in a "kissing" complex.

169 ontains a classification of the internal and hairpin loops in a comprehensive collection of 497 NMR a

170 emis open AAV inverted terminal repeat (ITR) hairpin loops in a tissue-dependent manner.

171 cur with the greatest probability in similar hairpin loops in proteins.

172 Phylogenetically variable hairpin loops in ribosomal RNA are mutated to allow hybr

173 and kink-turn internal loops or T- and GNRA hairpin loops) in any PDB file or across a whole set of

174 l RdRps that contain similar regulatory beta-hairpin loops, including bovine viral diarrhea virus, de

175 that lentiviral constructs containing short hairpin loop inhibitory RNAs for human YY1 (shYY1) and i

176 and selectivities of a subset of the ligand-hairpin loop interactions were determined.

177 To reveal mechanism, we tested different hairpin loop intermediates expected to form and facilita

178 , as well as single-stranded regions such as hairpin loops, internal loops, and junctions.

179 ry interactions involves the docking of GNRA hairpin loops into stem-loop structures on other regions

180 This hairpin loop is critical for efficient catalysis in the

181 The six-nucleotide hairpin loop is highly conserved in large subunit riboso

182 ment at this position indicates that the DNA hairpin loop is not opened at the position adjacent to t

183 The structure of the L3 central hairpin loop isolated from the antigenomic sequence of t

184 e spliceosomal U2B"/U2A' protein complex and hairpin-loop IV of U2 small nuclear RNA.

185 ces, J1/4 and J4/2, together with one of the hairpin loops, L3.

186 was probed for binding to a 6-nucleotide RNA hairpin loop library (4096 members).

187 used herein to analyze a six-nucleotide RNA hairpin loop library.

188 (gp4), the product of gene 4, has basic beta-hairpin loops lining its central core where they are pos

189 n an RNA-RNA kissing-loop interaction with a hairpin loop located at the 5' end of the RNA.

190 ions of proNGF are mostly disordered and two hairpin loops (loop 2) at the top of the NGF dimer have

191 intron of the human gene, suggesting that a hairpin loop may be involved in this intronic polyadenyl

192 Hairpin loops may be opened by strand displacement using

193 The stable d(cGNAg) hairpin loop motif (closing base pair in lower case; loo

194 of an experimentally well-characterized RNA hairpin-loop motif (sequence 5'-GGGC[GCAA]GCCU-3') via e

195 selected variants (30) had W79 in the second hairpin-loop motif, but there was diversity for hydropho

196 nding and inhibition appears to be a 40-base hairpin/loop motif with an asymmetrical internal loop.

197 to form coordinative chain cross-links in a "hairpin loop" motif.

198 Previous work from our lab on small DNA hairpin loop motifs, d(cGNAg) and d(cGNABg) (where B is

199 y developed to predict the stability for RNA hairpin loops (n > 3) includes contributions from the si

200 type of stacking interactions in the stem 1 hairpin loop not present in the pseudoknot.

201 he newly selected structure is a terminal or hairpin loop of 20 nucleotides, 15 being invariant.

202 of the coat protein (CP) gene, with a bulged hairpin loop of 28 nt as its most essential element, was

203 s reveal new functions for the alpha5-alpha6 hairpin loop of Bax: (i) regulation of mitochondrial tar

204 ntaining the hif-2 genes with termini in the hairpin loop of flanking intergenic dyad sequences.

205 hydrophobic interaction with an exposed beta hairpin loop of M48(USP).

206 rvation, we hypothesized that the disordered hairpin loop of sNRE facilitates conformational rearrang

207 ed with the MGDW motif located in a putative hairpin loop of the B subunit and that the expression of

208 f the inhibitor's linker segment with the 99-hairpin loop of trypsin, which is absent in plasmin.

209 to interact with a hairpin helix of AcrA and hairpin loops of AcrB respectively.

210 We used structure-based mutations on the hairpin loops of myotrophin to determine the effect of t

211 For hairpin loops of n = 3, delta G degree 37L(3) = +4.8 + 0

212 For hairpin loops of n = 4-9, delta G037iL(n) is 4.9, 5.0, 5

213 For hairpin loops of n = 4-9, deltaGo(37iL)(n) is 4.9, 5.0,

214 recent model that predicts the stability of hairpin loops of six nucleotides on the basis of the clo

215 Mutations in the bulge and hairpin loops of stem C decreased the ability of the tRN

216 The 5' end of 3-base hairpin loops of the ITR was the primary target for DNA-

217 Hairpin loops of three are modeled as independent of loo

218 tire length, initial N-portion residues, and hairpin-loop of three Pro and one Ser residues, as well

219 he insert of interest, and a single-stranded hairpin loop on either end, which provides a site for pr

220 FKBP51 mutation L119P, which is located in a hairpin loop overhanging the catalytic pocket and introd

221 These results strongly suggest that the hairpin loop participates in the binding of substrate an

222 tted DNA sequences as input and identify the hairpin looping patterns, and (ii) exploit the consensus

223 e the motifs that each ligand binds, and the hairpin loop preferences for 1 and 2 were computed.

224 A hairpin loop protruding from RidL inserts into a conserv

225 epresented by the presence or absence of DNA hairpin loops protruding out of the lattice plane.

226 s were observed, such as small inversions in hairpin-loop regions and indels, which were common in in

227 motifs of the first (QVVAG) and second (EW) hairpin-loop regions were constructed.

228 ults define residues in the first and second hairpin-loop regions which are essential for optimal int

229 Other substitutions in beta-hairpin loop residues increased initiation fidelity and

230 Analysis of the structures of these three hairpin loops reveals a network of heterogeneous hydroge

231 ped a method to express dsRNA as an extended hairpin-loop RNA.

232 ct palindromic sequences that could produce "hairpin-loop" secondary structures with relatively high

233 ng recurrent 3D motifs from RNA internal and hairpin loop sequences extracted from secondary structur

234 All possess shortened hairpin-loop sequences expected to alter tertiary contac

235 zes the template-strand hairpin owing to the hairpin-loop sequences.

236 revealed that residues 175-185 assume a beta-hairpin loop similar to a putative ankyrin-binding motif

237 ally incorporated into the cruciform arms as hairpin loops, single unpaired bases, and complex local

238 The model for predicting hairpin loop stability for loops larger than three becom

239 D (1)H-NMR structure of HB10 revealed a beta-hairpin loop stabilized by the disulfide bond and cross-

240 motifs, such as asymmetric internal loops or hairpin loop-stem junctions, by aminoglycoside antibioti

241 sequence (U/G)CCCG(A/G) in the context of a hairpin loop structure (nucleolin recognition element; N

242 ined the B52-binding site on these RNAs as a hairpin loop structure covering about 20 nucleotides, wh

243 embrane distal tip of the short helix of the hairpin loop structure, and HA2 position 112, located in

244 ine-binding RNAs have a common internal loop-hairpin loop structure, based on a conserved RAAGUGGGKKN

245 deletions occurred within the same potential hairpin loop structure, which had the lowest free energy

246 ructure analyses indicate a single conserved hairpin-loop structure towards the 5' end of the transcr

247 aptamer truncation study indicated that the hairpin-loop structure with 23 nucleotides length contai

248 9(ts) mutation by a process mediated by long hairpin loop structures (>/=5 repeats).

249 anhandle structure and the presence of local hairpin loop structures in both the 5' and 3' ends of vR

250 oducts allowed precise identification of the hairpin loop structures involved in termination/antiterm

251 (most stable hairpin) of the five potential hairpin loop structures present in the 25K FP gene.

252 umerous complex mutation patterns, including hairpin loop structures, and explains multinucleotide mu

253 equilibrium between quadruplexes and stable hairpin-loop structures bound by optimal SSOs.

254 ur data indicate that multiple stem-loop and hairpin-loop structures exist within this region.

255 Such ligand target sites exist as hairpin-loop structures in the mRNAs of several of the p

256 ithin the sRNA teg49, there are two putative hairpin-loop structures, HP1 and HP2.

257 The ribozyme can act in trans on a hairpin-loop substrate, with which it interacts via tert

258 solution and solid-state structures of this hairpin loop suggests that formation of this hairpin may

259 esult from structural differences in TIMP AB hairpin loops than from crystal packing artifacts.

260 activated by the addition, in trans, of a ds hairpin loop that contains only the binding region of th

261 UIM forms an alpha-helix with an unexpected hairpin loop that contributes to the binding interface w

262 mational changes in EF-Tu, displacing a beta-hairpin loop that forms a critical salt-bridge contact w

263 ers solved the structure of a hexanucleotide hairpin loop that is conserved in large subunit ribosoma

264 contacts, many that are made by a long beta-hairpin loop that reaches into the major groove of the D

265 Herein, we report the identification of RNA hairpin loops that bind derivatives of kanamycin A, tobr

266 expand the information available on the RNA hairpin loops that bind small molecules and could prove

267 araplegia encode proteins with intramembrane hairpin loops that contribute to the curvature of the en

268 le bimolecular structure containing two GTTT hairpin loops that interact through a novel T : G : G :

269 at TNR expansion can be prevented via BER in hairpin loops that is coupled with the removal of TNR ha

270 th the RNA polymerase involve a portion of a hairpin loop (the specificity loop) that makes specific

271 ps revealed that consecutive ANK repeat beta-hairpin loop tips (repeats 22-24) are required for InsP(

272 e ankyrin-B ANK (ankyrin repeat) repeat beta-hairpin loop tips revealed that consecutive ANK repeat b

273 ve altered multiple residues within the beta-hairpin loop to determine their role during dTTPase-driv

274 oices for loop, neck, and toehold length for hairpin loops to be used as fuel for autonomous DNA devi

275 e helix-turn-helix motif and within the beta hairpin loop, two putative DNA binding domains within th

276 The hairpin loop, UAGAAGC closed by a U-A pair, is the same

277 The QVVAG motif in the first hairpin loop was invariant in all functional scN protein

278 A folding transition taking place in the RNA hairpin loop was shown to have a negligible dependence o

279 A.U helices were modestly affected, and the hairpin loop was very sensitive.

280 GCGU4U5A6A7G8U9CGCA), which has an r(UUAAGU) hairpin loop, was determined by NMR and molecular modeli

281 and the conformation of the active site beta-hairpin loop were characterized by the MD analyses.

282 Arg82, Lys84 and His86, located in a hairpin loop, were found to be critical for binding KDR/

283 s mRNA, including the potential formation of hairpin loops which might be important in its intracellu

284 ant E. coli strains; the in vivo cleavage of hairpin loops, which are an obligate consequence of slip

285 graminearum preferentially targets A's in hairpin loops, which is similar to the anticodon loop of

286 ich the energetics and structure of d(cGNAg) hairpin loops will tolerate sequence variation.

287 il dimerization of two symmetry-related stem-hairpin loops with adjacent strands antiparallel to each

288 or CTG triplets in DNA can form intrastrand hairpin loops with combinations of normal and mismatched

289 triplet, in accordance with our finding that hairpin loops with even numbers of triplets are 1-2 kcal

290 The sequence forms a hairpin loop, with residues important for binding occurr

291 dy of the hybridization of complementary DNA hairpin loops, with particular reference to their use as

292 ragment buries several phosphate groups of a hairpin loop within a large tertiary core.

293 tion factor by site-specific cleavage of two hairpin loops within its mRNA to facilitate its nonconve

294 It cannot be considered to be a simple hairpin-loop yet it is distinct from other well characte