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1 ent and is specific for the nicked strand of heteroduplex DNA.
2 siding in the major and minor grooves of the heteroduplex DNA.
3 hat observed with otherwise identical nicked heteroduplex DNA.
4 ocess that is important for the formation of heteroduplex DNA.
5 n close proximity to, the unpaired base of a heteroduplex DNA.
6 ch frequently escape mismatch repair when in heteroduplex DNA.
7 of 0.7 microm in the absence or presence of heteroduplex DNA.
8 eleting mismatch repair proteins to identify heteroduplex DNA.
9 S forms a tetramer on this single site-sized heteroduplex DNA.
10 tein that displays increased specificity for heteroduplex DNA.
11 ch as single-stranded (ss) DNA, DNA ends and heteroduplex DNA.
12 of HR intermediates, possibly by stabilizing heteroduplex DNA.
13 the intervening region shows no evidence of heteroduplex DNA.
14 rossover recombinants, both of which contain heteroduplex DNA.
15 two Holliday junctions flanking a region of heteroduplex DNA.
16 ntermediates but failed to detect associated heteroduplex DNA.
17 a pairing protein that cannot form extensive heteroduplex DNA.
18 branch migration leading to the formation of heteroduplex DNA.
19 c conversion results from mismatch repair of heteroduplex DNA.
20 f Holliday junctions, a process that extends heteroduplex DNA.
21 of Escherichia coli MutS with homoduplex and heteroduplex DNAs.
22 formation of unpaired or mispaired bases in heteroduplex DNAs.
23 iae RAD54 gene functions in the formation of heteroduplex DNA, a key intermediate in recombination pr
24 n mismatch repair functions fail to act upon heteroduplex DNA-aberrant segregation frequencies at the
27 rkers spanning the DSB should be included in heteroduplex DNA and be detectable as non-Mendelian segr
28 e 3' invading strand to be incorporated into heteroduplex DNA and to be extended by DNA polymerases.
29 which, MutS, recognizes mismatched bases in heteroduplex DNA and, along with MutL, blocks strand exc
30 g, promote stabilization of the newly formed heteroduplex DNA, and contribute to the directionality o
31 ir machinery; more than 85% of mismatches in heteroduplex DNA are corrected in favor of the resident,
33 ous conversion tracts, as well as persistent heteroduplex DNA at crossover sites in mature spermatozo
35 MutS,L inhibit the formation of full-length heteroduplex DNA between M13-fd DNA in the presence of R
36 ch close to the end of the fragment; rather, heteroduplex DNA between the fragment and the chromosome
39 nt proteins were assayed for ATP hydrolysis, heteroduplex DNA binding, heterodimer MutS formation, an
40 duced the affinity of the mutant protein for heteroduplex DNA by roughly 3 orders of magnitude, but h
43 ion between divergent sequences by rejecting heteroduplex DNA containing excessive nucleotide mismatc
44 ismatch binding activity with affinities for heteroduplex DNAs containing either an insertion/deletio
45 MutS DNA mismatch repair protein recognizes heteroduplex DNAs containing mispaired or unpaired bases
46 repair protein that recognizes and binds to heteroduplex DNAs containing mispaired or unpaired bases
47 The MutS DNA mismatch protein recognizes heteroduplex DNAs containing mispaired or unpaired bases
49 tes that the lifetime of MutS complexes with heteroduplex DNA depends on the nature of the nucleotide
50 ection of large DNA mismatches that occur in heteroduplex DNA during meiotic recombination at the HIS
51 tion, or to limit the extent of formation of heteroduplex DNA during recombination between divergent
53 phase of DNA strand exchange by stimulating heteroduplex DNA extension of established joint molecule
55 hought to promote dissociation of RAD51 from heteroduplex DNA following strand exchange during homolo
56 e tract length and directionality, including heteroduplex DNA formation, transcription, replication a
61 near duplex DNA, we found that the length of heteroduplex DNA formed by hRad51 was limited to approxi
63 nalysis indicates that the extent of meiotic heteroduplex DNA formed in a MMR-defective strain is 65%
64 (OsPERT) was primarily developed to prepare heteroduplex DNA from alkali-denatured high molecular we
65 the repair of 1-nucleotide loop mispairs in heteroduplex DNA generated during meiotic recombination.
66 ed in the rad51Delta mutant, indicating that heteroduplex DNA has an altered structure, or is process
67 plex between human MutSalpha, MutLalpha, and heteroduplex DNA has been demonstrated by surface plasmo
69 ction of Escherichia coli MutS and MutL with heteroduplex DNA has been visualized by electron microsc
70 xamined the binding of Taq MutS protein to a heteroduplex DNA having a single unpaired thymidine resi
71 the mechanism of gene targeting, we examined heteroduplex DNA (hDNA) formation during targeting of tw
73 These models differ in the arrangement of heteroduplex DNA (hDNA) in recombination intermediates.
74 t from gap repair or from mismatch repair of heteroduplex DNA (hDNA) in recombination intermediates.
75 eading to G-G or C-C mispairs in presumptive heteroduplex DNA (hDNA) intermediates displayed a partic
77 Recombination intermediates with a maximum heteroduplex DNA (hDNA) region of 697 bp contained a cen
78 single-strand annealing, yielding predicted heteroduplex DNA (hDNA) regions with three to nine misma
79 t they cannot efficiently correct mismatched heteroduplex DNA (hDNA) that is formed adjacent to the D
80 to effect strand exchange during HR, forming heteroduplex DNA (hDNA) that is resolved by mismatch rep
81 e function of Rad54 is removal of Rad51 from heteroduplex DNA (hDNA) to allow HR-associated DNA synth
82 tiating DSB, with a short (<300 bp) tract of heteroduplex DNA (hDNA) to one side and hDNA on the othe
88 o the DNA secondary structures (hairpins) in heteroduplex DNA in a DNA end-independent fashion and th
89 We have analyzed repair of nicked circular heteroduplex DNA in extracts of Exo1-deficient mouse emb
90 a single clone, suggesting the existence of heteroduplex DNA in the original recombination product.
91 port of this, analysis of the arrangement of heteroduplex DNA in the postmeiotic segregation products
92 Furthermore, at optimal salt concentration, heteroduplex DNA increases the kcat for ATP hydrolysis t
94 ation in the yeast Saccharomyces cerevisiae, heteroduplex DNA is formed when single-stranded DNAs fro
95 l repeats can be used for repair showed that heteroduplex DNA is likely to be unwound rather than deg
96 half-maximal concentration for activation by heteroduplex DNA is significantly lower under physiologi
98 Bs) but does not progress beyond this stage; heteroduplex DNA, joint molecules, and crossovers are no
99 ein A (RPA) proteins work in concert to make heteroduplex DNA joints during homologous recombination.
103 (Tma) EndoV recognizes and primarily cleaves heteroduplex DNA one base 3' to the mismatch, as well as
104 ls initiated recombination, but did not form heteroduplex DNA or double Holliday junctions, suggestin
105 ciation of MutS from a mismatch using linear heteroduplex DNAs or heteroduplexes blocked at one or bo
106 of strand exchange, during the extension of heteroduplex DNA, or during the resolution of recombinat
107 tion machine") at a break, formation of long heteroduplex DNA, priming of DNA replication by a broken
108 upon ATP hydrolysis, leaving it stuck on the heteroduplex DNA product after DNA strand exchange.
111 e show here that these intermediates contain heteroduplex DNA, providing an important validation of t
112 usion protein bound to a short, 37-base pair heteroduplex DNA reveal that the protein binds to DNA as
113 g the process of homologous recombination, a heteroduplex DNA structure, or a 'Holliday junction' (HJ
114 activator-independent transcription from the heteroduplex DNA template and had substitutions within a
115 actions between polymerase II (Pol II) and a heteroduplex DNA template do not depend on general trans
117 ces to cleave single base pair mismatches in heteroduplex DNA templates used for mutation and single-
118 le the ATPase is activated by homoduplex and heteroduplex DNA, the half-maximal concentration for act
119 phosphorylated RPA initially binds to nicked heteroduplex DNA to facilitate assembly of the MMR initi
120 break repair (DSBR) to correct mismatches in heteroduplex DNA, to suppress recombination between dive
121 ns of MutS protein in close proximity to the heteroduplex DNA, we have utilized the photoactivated cr
122 bound to monosubstituted 5-IdUrd-containing heteroduplex DNAs were cross-linked with long-wavelength
123 tion indicates a defect in the correction of heteroduplex DNA, whereas the frequency of crossing-over
124 degradation of the ends or from formation of heteroduplex DNA which is corrected with a strong bias i
125 rotein A (RPA), can promote the formation of heteroduplex DNA, which is a key intermediate in homolog
126 smatch-specific endonuclease CEL I to cleave heteroduplex DNA with a very high specificity and sensit
127 monstrates that Uve1p recognizes and cleaves heteroduplex DNA with small unpaired loops but does not
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