ライフサイエンスコーパス: high-throughput sequencing

1 ent with the results from the Illumina MiSeq high throughput sequencing.

2 he efficiency for large datasets provided by high throughput sequencing.

3 fungal samples of two units were analysed by high throughput sequencing.

4 -linking and immunoprecipitation followed by high-throughput sequencing.

5 olution with bisulfite treatment followed by high-throughput sequencing.

6 ulating heritability for traits derived from high-throughput sequencing.

7 ker, Tn5 tagmentation, PCR amplification and high-throughput sequencing.

8 erse transcription of 5'P mRNAs and Illumina high-throughput sequencing.

9 sequenced all PCR products simultaneously by high-throughput sequencing.

10 and analyzed their response to selection by high-throughput sequencing.

11 tructure on a transcriptome-wide scale using high-throughput sequencing.

12 se transcriptase PCR, microarray analysis or high-throughput sequencing.

13 ymorphisms normally obscured by the noise of high-throughput sequencing.

14 ization arrays, quantitative PCR (qPCR), and high-throughput sequencing.

15 rom each sample were obtained using Illumina high-throughput sequencing.

16 ow this is changing with the introduction of high-throughput sequencing.

17 l genetic libraries that can be tracked with high-throughput sequencing.

18 itative polymerase chain reaction (qPCR) and high-throughput sequencing.

19 emerged for probing RNA structures based on high-throughput sequencing.

20 y represents a major challenge in the era of high-throughput sequencing.

21 saturated transposon mutagenesis coupled to high-throughput sequencing.

22 e quantification of cytosine methylation via high-throughput sequencing.

23 sition were revealed by quantitative PCR and high-throughput sequencing.

24 andscape of anaerobic infections in HS using high-throughput sequencing.

25 -1-positive IncX4 plasmids were selected for high-throughput sequencing.

26 arcodes in transcribed RNA are quantified by high-throughput sequencing.

27 h nucleases or chemical cleavage followed by high-throughput sequencing.

28 aration of DNA sequencing libraries prior to high-throughput sequencing.

29 s now yielding to much larger data sets from high-throughput sequencing.

30 chromosome conformation capture coupled with high throughput sequencing (4C-seq) to analyze FOXP3-dep

31 To tap the full potential of high-throughput sequencing, a thorough understanding of

32 ompared to that of 88 control samples by 454 high-throughput sequencing after construction of 16S rib

33 EM fungal communities were assessed with high-throughput sequencing along with measures of plant

34 High-throughput sequencing analysis has accelerated sear

35 tin immunoprecipitation [ChIP] combined with high-throughput sequencing) analysis revealed that both

36 ulations of partially edited sequences using high throughput sequencing and a novel bioinformatic pla

37 an estuary and the open ocean generated with high throughput sequencing and clone libraries plus puta

38 Rapid advances in high-throughput sequencing and a growing realization of

39 Most lncRNA studies are highly dependent on high-throughput sequencing and bioinformatic analyses, f

40 n a large amount of recent data gleaned from high-throughput sequencing and bioinformatic analyses.

41 The advent of unbiased high-throughput sequencing and bioinformatics has enable

42 ction fragment length polymorphism (T-RFLP), high-throughput sequencing and clone library analysis of

43 se genomic studies, as well as the advent of high-throughput sequencing and genome engineering techni

44 s a method for profiling transcription using high-throughput sequencing and is an important component

45 High-throughput sequencing and mathematical modelling ha

46 develop a method that takes short reads from high-throughput sequencing and outputs a genetic profile

47 ith pathogenic RASGRP2 variants, we compared high-throughput sequencing and phenotype data from 2042

48 High-throughput sequencing and quantitative real-time PC

49 specific TCR repertoire was characterized by high-throughput sequencing and spectratyping analysis.

50 ent of tree species richness using molecular high-throughput sequencing and visual macroscopic assess

51 ntial off-target sites (OTS) by whole-genome high-throughput sequencing and/or Sanger-sequencing anal

52 tin immunoprecipitation [ChIP] combined with high-throughput sequencing) and RNA-seq (RNA sequencing)

53 ut microbiota was analyzed by 16 S rRNA gene high-throughput sequencing, and anxiety-like behaviors w

54 Fungal communities were determined using high-throughput sequencing, and impacts of human disturb

55 y-based G4 chromatin immunoprecipitation and high-throughput sequencing approach.

56 r acclimatisation (SW) by a 16S rRNA (V3-V4) high-throughput sequencing approach.

57 We used a high-throughput-sequencing approach to compare the globa

58 High-throughput sequencing approaches were used to ident

59 vancements in animal tracking technology and high-throughput sequencing are rapidly changing the ques

60 We report a high-throughput sequencing assay to map in vitro DNA rep

61 ay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq) analyses revealed

62 transposase-accessible chromatin coupled to high-throughput sequencing (ATAC-seq) data, we found tha

63 ay for Transposase-Accessible Chromatin with high-throughput sequencing (ATAC-seq) to define chromati

64 ay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq) to genotype and pr

65 ay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq), we identified acc

66 ay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq), we show that the

67 ay for Transposase-Accessible Chromatin with high-throughput sequencing (ATAC-seq).

68 ata sets were generated using four different high-throughput sequencing based methods.

69 ions on walnut surfaces were investigated by high-throughput sequencing based on the bacterial 16 S r

70 onia solani, and Sclerotinia sclerotiorum, a high-throughput sequencing-based metatranscriptomic appr

71 The recent advent of high-throughput sequencing-based structure profiling exp

72 ues combining nuclear proximity ligation and high-throughput sequencing, but independent methods to v

73 variation is one of the main applications of high-throughput sequencing, but is still challenging whe

74 ded here, PRO-seq (or PRO-cap) libraries for high-throughput sequencing can be generated in 4-5 worki

75 g wide-range PCR amplification combined with high-throughput sequencing can provide a broad perspecti

76 driver mutations over inactive passengers in high-throughput sequencing cancer data sets.

77 nt problem, particularly given the growth of high-throughput sequencing, cell sorting and single cell

78 ng chromatin immunoprecipitation followed by high-throughput sequencing (ChIP-seq) and compared them

79 Chromatin immunoprecipitation high-throughput sequencing (ChIP-seq) revealed that the

80 oss-Linked ImmunoPrecipitation associated to high-throughput sequencing (CLIP-seq).

81 Structure probing coupled with high-throughput sequencing could revolutionize our under

82 approaches (transcriptomics, proteomics and high throughput sequencing crosslinking immunoprecipitat

83 computing possible biomarker candidates from high throughput sequencing data and could be generalized

84 method for detecting somatic variants using high throughput sequencing data from unpaired tissue sam

85 These signatures have been identified from high throughput sequencing data generated from cancer ge

86 We also applied the algorithm to high throughput sequencing data obtained for viruses pre

87 friendly Galaxy pipeline for the analysis of high throughput sequencing data that is pre-packaged for

88 CGD, which allows online browsing of mapped high throughput sequencing data, and its implementation

89 The efforts of discovering DDs in high-throughput sequencing data are currently dominated

90 High-throughput sequencing data are widely collected and

91 By integrating high-throughput sequencing data for binding and splicing

92 Pre-processing of high-throughput sequencing data for immune repertoire pr

93 s extended to identify methylation loci from high-throughput sequencing data from multiple experiment

94 High-throughput sequencing data from TCRs and Igs can pr

95 n computational biology due to the volume of high-throughput sequencing data generated by recent cons

96 The use of high-throughput sequencing data has improved the results

97 confirmed by comparing input versus pulldown high-throughput sequencing data on M.SssI-treated sample

98 Processing of high-throughput sequencing data requires basic bioinform

99 Mapping high-throughput sequencing data to a reference genome is

100 issue of Cell, Mirabello and colleagues use high-throughput sequencing data to assess the diversity

101 and deletions can be detected sensitively in high-throughput sequencing data, using new computational

102 has proven problematic to genotype STRs from high-throughput sequencing data.

103 advances owing in part to the application of high-throughput sequencing data.

104 egulation of alternative exon splicing using high-throughput sequencing data.

105 tabase-free approach to finding DD events in high-throughput sequencing data.

106 tin immunoprecipitation [ChIP] combined with high-throughput sequencing) data show that YAP impairs S

107 ansposase-accessibility assays combined with high-throughput sequencing enable the genome-wide study

108 High-throughput sequencing enables unbiased profiling of

109 6S rRNA gene amplicon, and metatranscriptome high-throughput sequencing, enabling an unprecedented de

110 In this high-throughput sequencing era, a tremendous amount of R

111 osome in the 1960s and 1970s, in the current high-throughput sequencing era, DNase I has mainly been

112 ter protocols and decreasing costs have made high-throughput sequencing experiments now accessible ev

113 g and immunoprecipitation methods coupled to high-throughput sequencing experiments showed that phosp

114 ities to display and interact with data from high-throughput sequencing experiments.

115 essing aligned reads from chromatin-oriented high-throughput sequencing experiments.

116 otide barcodes that are increasingly used in high-throughput sequencing experiments.

117 od to quantify protein-DNA interactions on a high-throughput sequencing flow cell, we comprehensively

118 mer pairs targeting a wide range of taxa and high-throughput sequencing for species identification.

119 ifferent paradigms and identified ARGs using high-throughput sequencing from brains as well as from s

120 After the introduction of high-throughput sequencing, genotyping arrays continue t

121 ew structure probing techniques coupled with high-throughput sequencing has helped RNA studies expand

122 High-throughput sequencing has identified thousands of s

123 High-throughput sequencing has made it theoretically pos

124 old technology with the new capabilities of high-throughput sequencing has resulted in powerful reve

125 en access data libraries, and application of high-throughput sequencing have allowed these microbes t

126 Recent advances in high-throughput sequencing have enabled strategies that

127 logical advances in repertoire profiling via high-throughput sequencing have resulted in an explosion

128 as Hi-C that combine proximity ligation with high-throughput sequencing have revealed domains of self

129 mosome conformation capture (3C) followed by high-throughput sequencing (Hi-C) with wild-type and mut

130 rosslinking immunoprecipitation coupled with high-throughput sequencing (HITS-CLIP) to generate the f

131 iolet-crosslinking-affinity purification and high-throughput sequencing (HITS-CLIP).

132 The SELEX procedure, coupled with high-throughput sequencing (HT-SELEX), creates billions

133 By high throughput sequencing (HTS), we obtained the first

134 High-throughput sequencing (HTS) and bioinformatics have

135 High-throughput sequencing (HTS) data are commonly store

136 ial step of a robust pipeline for processing high-throughput sequencing (HTS) data.

137 While high-throughput sequencing (HTS) has been used successfu

138 High-throughput sequencing (HTS) is now a widely used an

139 .) has many advantages over laboratory-based high-throughput sequencing (HTS) methods for species lev

140 Here, we compare high-throughput sequencing (HTS) of IGH and TRG genes vs

141 High-throughput sequencing (HTS) of in vitro selected po

142 The advancement of high-throughput sequencing (HTS) technologies and the ra

143 It has been suggested that high-throughput sequencing (HTS) technologies coupled wi

144 a sets of CSR junction sequences produced by high-throughput sequencing (HTS), we designed CSReport,

145 Among currently available tests, high-throughput sequencing (HTS)-based approaches are in

146 nd dual-strain infection was confirmed using high-throughput sequencing (HTS).

147 High-throughput sequencing identified 43 taxa associated

148 High throughput sequencing in 147 patients was performed

149 We carried out whole-exome ultra-high throughput sequencing in brain samples of suicide v

150 e performed extensive mutational analysis by high-throughput sequencing in 215 patients with CBF-AML

151 termed familial Barrett esophagus, by using high-throughput sequencing in affected individuals from

152 ng chromatin immunoprecipitation followed by high-throughput sequencing in kiwifruit A. chinensis.

153 TCRbeta high-throughput sequencing in naive CTL of differently a

154 High-throughput sequencing in the four remaining familie

155 e sequences, using hybridization capture and high-throughput sequencing, in the attempt to identify p

156 urate detection of genomic alterations using high-throughput sequencing is an essential component of

157 on of low-abundance somatic DNA mutations by high-throughput sequencing is challenging because of the

158 High-throughput sequencing is fast and inexpensive, maki

159 High-throughput sequencing is helping biologists to over

160 and immunoprecipitation (CLIP), followed by high-throughput sequencing, is a powerful biochemical as

161 vances in technology, in particular low-cost high-throughput sequencing, it is now possible to develo

162 nd transposon-derived RNAs from a variety of high-throughput sequencing libraries, including small RN

163 High-throughput sequencing, mass spectroscopy methods an

164 A combination of 3D modeling and high-throughput sequencing may offer a faster way to det

165 ifferential TCR signatures, as determined by high-throughput sequencing, may represent an imprint of

166 Here we develop a high-throughput sequencing method that enables accurate

167 We used a new high-throughput sequencing method, known as CPD-seq, to

168 man glycome has been hindered by the lack of high-throughput sequencing methods for glycans.

169 The widespread application of high-throughput sequencing methods is resulting in the i

170 iplexed nanopore sensors, should lead to new high-throughput sequencing methods.

171 a subtropical estuary by rRNA and rDNA-based high throughput sequencing of 97 samples collected along

172 High throughput sequencing of a viral population subsequ

173 Illumina MiSeq high throughput sequencing of the 16 S rRNA gene showed

174 High throughput sequencing of two key rounds confirmed t

175 We demonstrate ultra-high-throughput sequencing of >50,000 cells per run in a

176 cterize internal microbial communities using high-throughput sequencing of 16S rRNA gene amplicons fo

177 nvestigated the microbial community by using high-throughput sequencing of 16S rRNA gene amplicons wh

178 cross host development were analyzed via the high-throughput sequencing of 16S rRNA gene amplicons.

179 High-throughput sequencing of 16SrRNA genes demonstrated

180 entify novel ODA loci, we conducted targeted high-throughput sequencing of 407 candidate genes in an

181 Microbial community analysis via high-throughput sequencing of amplified 16S rRNA genes i

182 Most discordances were clarified upon high-throughput sequencing of antigen-receptor rearrange

183 As high-throughput sequencing of B cells becomes more commo

184 High-throughput sequencing of barcoded Kras (HDR) allele

185 an approach that uses sequencing reads from high-throughput sequencing of bisulfite-converted DNA to

186 The recent high-throughput sequencing of cancer genomes and transcr

187 High-throughput sequencing of circulating tumor DNA (ctD

188 species by combining systemic dsx knockdown, high-throughput sequencing of diverse tissues and a geno

189 Short- and long-read high-throughput sequencing of DNA and RNA demonstrated t

190 We used high-throughput sequencing of DNA from rice lines derive

191 . gigas and C. hongkongensis), and conducted high-throughput sequencing of four small RNA libraries c

192 Furthermore, high-throughput sequencing of human genomic DNA pulled d

193 atients and 7 healthy controls, we performed high-throughput sequencing of immunoglobulin heavy chain

194 mics of influenza virus evolution, rapid and high-throughput sequencing of influenza viruses remains

195 Here we used high-throughput sequencing of marker genes to elucidate

196 seq), an efficient and convenient method for high-throughput sequencing of mature tRNAs.

197 High-throughput sequencing of mRNA (RNA-seq) has become

198 A high-throughput sequencing of mRNAs was performed to inv

199 Using high-throughput sequencing of patient and xenografted ce

200 With the advent of high-throughput sequencing of RNA (RNA-Seq), the diversi

201 Using high-throughput sequencing of RNA isolated by crosslinki

202 High-throughput sequencing of RNA prepared using RPAD fr

203 We used high-throughput sequencing of short, cyclobutane pyrimid

204 High-throughput sequencing of T-cell receptor (TCR) repe

205 High-throughput sequencing of TEM-1 populations shows th

206 terization of salmon gut microbiota based on high-throughput sequencing of the 16S rRNA gene's V1-V2

207 Using high-throughput sequencing of the 16S rRNA gene, we foun

208 stributions of benthic microeukaryotes using high-throughput sequencing of the 18S rRNA gene and quan

209 erases can be UV cross-linked to RNA in vivo High-throughput sequencing of the bound RNAs revealed st

210 s developed here make it possible to analyse high-throughput sequencing of the methylome of any given

211 tential target sequences in parallel through high-throughput sequencing of the products retained afte

212 By high-throughput sequencing of the RNAs from 275 isolates

213 We performed high-throughput sequencing of the TCRbeta chain compleme

214 High-throughput sequencing of the variable domains of im

215 High-throughput sequencing of these fragments in DNA fro

216 High-throughput sequencing of tick salivary glands has t

217 lobulin (referred to as Ig-seq) coupled with high-throughput sequencing of transcripts encoding B cel

218 We used high-throughput sequencing of VDJ rearrangements to expl

219 By applying single-cell high-throughput sequencing on gut lesion plasma cells (P

220 Libraries are generated for high-throughput sequencing on the Illumina platform usin

221 In this study, we applied high-throughput sequencing on the transcriptomes of 13 d

222 To overcome the high error rate of high-throughput sequencing, our assay uses a barcoding s

223 High-throughput sequencing platforms are increasingly us

224 experiments that use label incorporation and high throughput sequencing produce peaked data similar t

225 We are awash in proteins discovered through high-throughput sequencing projects.

226 Using a 454 high-throughput sequencing protocol, we report extremely

227 pared with different library preparation and high-throughput sequencing protocols.

228 However, high-throughput sequencing provided higher resolution of

229 for long sequences was extended to apply to high-throughput sequencing reads and the strategies to e

230 However, high-throughput sequencing remains error-prone, necessit

231 olism in the reactor, and the Illumina MiSeq high-throughput sequencing revealed 22 phyla and 88 gene

232 High-throughput sequencing revealed that a 22 nt miRNA w

233 Using a high-throughput sequencing screen to implement precision

234 Currently, DASHR (v1.0) integrates 187 smRNA high-throughput sequencing (smRNA-seq) datasets with ove

235 Data from a plethora of high-throughput sequencing studies is readily available

236 However, despite high-throughput sequencing studies, the cause of the dis

237 matin immunoprecipitation (ChIP) followed by high-throughput sequencing suggests that the protein ass

238 cture and compositions were determined using high-throughput sequencing targeting the V3-V4 regions o

239 Changqing, China, were investigated using a high throughput sequencing technique to analyze the infl

240 : Ribosome profiling is a recently developed high-throughput sequencing technique that captures appro

241 ATAC-seq is a high-throughput sequencing technique that identifies ope

242 High throughput sequencing techniques are poorly adapted

243 Thanks to high throughput sequencing techniques, such as, MeRIP-Se

244 Meanwhile, the advent of several high-throughput sequencing techniques for profiling init

245 along with advances in mass spectrometry and high-throughput sequencing techniques, have caused resea

246 by genomics discovery studies that use novel high-throughput sequencing techniques.

247 Due to the recent advances in high throughput sequencing technologies, an increased nu

248 High-throughput sequencing technologies and a suite of c

249 se has been made more feasible by the use of high-throughput sequencing technologies and has also fac

250 High-throughput sequencing technologies and use of gene

251 The development of high-throughput sequencing technologies has allowed tran

252 The advent of high-throughput sequencing technologies has brought abou

253 High-throughput sequencing technologies have allowed man

254 High-throughput sequencing technologies have increased t

255 High-throughput sequencing technologies have revolutioni

256 Hence, with advances in high-throughput sequencing technologies, capturing and q

257 Due to the recent advances in high-throughput sequencing technologies, it becomes poss

258 rmation and subsequently retrieving them via high-throughput sequencing technologies.

259 creasingly large datasets produced by modern high-throughput sequencing technologies.

260 es has benefited enormously from advances in high-throughput sequencing technologies; however, once t

261 present study, we took advantage of powerful high throughput sequencing technology and bioinformatics

262 High-throughput sequencing technology contributed to con

263 High-throughput sequencing technology has been widely us

264 High-throughput sequencing technology has enabled popula

265 With advances of high-throughput sequencing technology such as ChIP-seq,

266 Here, we develop a high-throughput sequencing technology to define TOP2 cle

267 crobiome research has been revolutionized by high-throughput sequencing technology, permitting compos

268 Massively parallel high-throughput sequencing technology, where DNA is shea

269 in plant and animal transcriptomes by using high-throughput sequencing technology.

270 We analyzed by high-throughput sequencing the small RNAs associated wit

271 Working in tandem with advanced analysis of high-throughput sequencing, these approaches will furthe

272 In this study we use high throughput sequencing to compare the global changes

273 sses, but also highlights the power of using high-throughput sequencing to address questions in evolu

274 s Center and Geisinger Health System couples high-throughput sequencing to an integrated health care

275 e the mechanism of pathogenesis, we employed high-throughput sequencing to analyze proviral integrati

276 use a combination of targeted enrichment and high-throughput sequencing to assemble and interpret a d

277 eaction with degenerate primers, followed by high-throughput sequencing to assess the relative abunda

278 es, and RNA sequencing (RNA-Seq), which uses high-throughput sequencing to capture all sequences.

279 We have used targeted high-throughput sequencing to characterize the 135kb SNC

280 vel variation relevant to the application of high-throughput sequencing to clinical diagnostics.

281 advanced in-solution mitogenome capture and high-throughput sequencing to fourteen dental samples ob

282 o psoralen-mediated RNA-RNA crosslinking and high-throughput sequencing to identify the mRNAs targete

283 Here, we used high-throughput sequencing to inventory the gut microbia

284 Using high-throughput sequencing to monitor translation in viv

285 the basis of their activity in vivo and uses high-throughput sequencing to provide a quantitative mea

286 directed repair (HDR) with DNA barcoding and high-throughput sequencing to simultaneously investigate

287 lysis, combining transposon mutagenesis with high-throughput sequencing, to identify genetic determin

288 Cross-link immunoprecipitation and high throughput sequencing uncovered the IGF2BP3-regulat

289 With high-throughput sequencing, unprecedented numbers of gen

290 High-throughput sequencing was performed on 12 different

291 transposase-accessible chromatin [ATAC] with high-throughput sequencing), was not substantially alter

292 Using hybridization capture and high-throughput sequencing, we have screened a wide rang

293 By high-throughput sequencing, we identified the main bacte

294 Using high-throughput sequencing, we investigated the clonal d

295 Using high-throughput sequencing, we show that Antarctica shar

296 ularly important consideration in the era of high-throughput sequencing, when the discovery of novel

297 benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how littl

298 d abundance of the 3' ends are determined by high-throughput sequencing, which reveals the exact geno

299 To achieve high-throughput sequencing with 2D materials, interdisci

300 st that combining new research tools such as high-throughput sequencing with experiments utilizing na