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1 ve oncogenes or fragile sites ("unexplained" homozygous deletions).
2 s 96 genomic regions recurrently targeted by homozygous deletions.
3 lines are superior for the identification of homozygous deletions.
4 n a specific area of common heterozygous and homozygous deletions.
5 occurrence of cancer gene amplifications and homozygous deletions.
6 al events, including 24 amplifications and 7 homozygous deletions.
7 nd include high-amplitude amplifications and homozygous deletions.
8 ated the genome landscape within unexplained homozygous deletions.
9 not translated, 4 were intronic, and 2 were homozygous deletions.
10 elocytic leukemia zinc finger (PLZF) protein homozygous deletions.
11 ions, some with high-level amplifications or homozygous deletions.
12 as project, 93 (21%) have KLLN hemizygous or homozygous deletions.
13 mic alterations including amplifications and homozygous deletions.
17 n cancer types and systematically screen for homozygous deletions, aiming to identify rare tumour sup
20 ted over 50 sites (amplifications, potential homozygous deletion and gains or losses which extended o
21 ozygosity and copy number changes, including homozygous deletion and gene amplification, were similar
27 showing signatures of positive selection for homozygous deletions and identify candidate tumour suppr
32 polymorphisms in NQO1 (Pro187Ser) and GSTM1 (homozygous deletion) and asthma risk in children with hi
33 reduced in LKB1-null cell lines (mutation or homozygous deletion) and this partial degradation occurs
34 dies have shown that loss of heterozygosity, homozygous deletions, and abnormal expression of the FHI
35 ed and mapped regions of single-copy losses, homozygous deletions, and amplicons of various sizes in
36 ncers, including 8.1% heterozygous and 12.1% homozygous deletions, and were linked to advanced tumor
37 hat the genomic positions of the unexplained homozygous deletions are not randomly determined (P < 0.
39 , supports the hypothesis that hemizygous or homozygous deletions are responsible for the abnormal ex
40 ithelial tumours and when further defined by homozygous deletions, are often the location of tumour s
41 DEAR1 undergoes loss-of-function mutations, homozygous deletion, as well as copy-number losses in mu
48 ood by TaqMan and BioTrove assays identified homozygous deletions at the M1 and T1 loci of GST (GSTM1
49 a tendency to reduce the adverse effects of homozygous deletions by minimizing the number of genes r
50 DUTT1 maps within a region of overlapping homozygous deletions characterized in both small cell lu
52 s on the yeast whole-genome heterozygous and homozygous deletion collections and quantified the growt
53 ll prostate epithelium is inhibited by Grp78 homozygous deletion, corresponding with suppression of A
57 eam reporter gene expression in strains with homozygous deletions for either gene, showing that each
63 ic deletions in the tumor genome, especially homozygous deletions (HODs), have provided important pos
64 e recurrent region of loss contained a focal homozygous deletion in 11q24.2-q24.3 including the ETS1
65 defect led to the identification of a large homozygous deletion in FANCC, the first cancer cell line
69 s/ins)) as the primary disease locus while a homozygous deletion in MAP9 (MAP9 (del/del)) was later i
71 ous studies have determined that mice with a homozygous deletion in the adapter protein p66(shc) have
73 ts do not exhibit any phenotype, whereas the homozygous deletion in the entire epiblast leads to panc
74 ith KS and their sister with nIHH harbored a homozygous deletion in the PROK2 gene (p.[I55fsX1]+[I55f
75 ng the c-myc and c-erbB-2 genes and apparent homozygous deletions in 3p21, 5q33, 8p23, 8p21, 9q34, 16
78 4*1B and CYP3A5*3 variants and did not carry homozygous deletions in both GSTM1 and GSTT1 (denoted lo
81 re, to elucidate further the pathogenesis of homozygous deletions in cancer, we investigated the geno
84 d adr-2, and characterize strains containing homozygous deletions in each, or both, of these genes.
85 Luca) region has been defined by overlapping homozygous deletions in lung and breast cancer cell line
86 elic losses and the discovery of overlapping homozygous deletions in lung and breast tumour-cell line
88 gene, is a site of frequent heterozygous and homozygous deletions in many cancer cells and precancero
89 nto 131 genomic regions, 27 of which exhibit homozygous deletions in more than one cancer cell line.
95 competitive repopulation advantage, whereas homozygous deletion induces hematopoietic stem cell fail
96 es were analyzed for loss of heterozygosity, homozygous deletion, intragenic mutations, and promoter
98 Inactivation of tumour-suppressor genes by homozygous deletion is a prototypic event in the cancer
101 inactivation of the PTEN gene by mutation or homozygous deletion is significantly lower than the rate
111 ed a pool of 4,627 diploid strains each with homozygous deletion of a nonessential gene to identify t
112 owth factor (VEGF) stimulation with regional homozygous deletion of Alk1 induces severe dysplasia in
117 ssociated with pancreatic agenesis; however, homozygous deletion of both Gata4 and Gata6 is necessary
120 Delta11/Delta11)p53(+/-) mice that carried a homozygous deletion of Brca1 exon 11 and a p53 heterozyg
121 dren, in which there is frequent concomitant homozygous deletion of CDKN2A (five of seven cases).
123 In contrast, expression of CD8 or CD62L, homozygous deletion of CDKN2A/CDKN2B, NOTCH1 and/or FBXW
126 ion was derived from study of knockout mice: homozygous deletion of dab2 results in early embryonic l
128 gressive PDAC was observed in the setting of homozygous deletion of either p53 or p16(Ink4a), the lat
130 in 3 of 20 ovarian tumor samples, as well as homozygous deletion of exon 2 in the lung adenocarcinoma
134 FoxO1(3A/LXXAA), those with cardiac-specific homozygous deletion of FoxO1 (c-FoxO1(-/-)), and beclin1
135 tumors induced by the Neu (ErbB-2) oncogene, homozygous deletion of Gab2 in mice had only a modest ef
141 and breast cancer were more consistent with homozygous deletion of GSTM1 or GSTT1, the AAgenotype of
145 naling and ADPKD cell proliferation in vitro Homozygous deletion of ILK in renal collecting ducts (CD
154 ns in the known NPHP genes, particularly the homozygous deletion of NPHP1 at 2q13, have been identifi
155 , these alterations are most commonly due to homozygous deletion of p16(INK4a) and less commonly due
156 EWS-FLI1 fusion type, p53 mutation, and homozygous deletion of p16/p14ARF have each been shown t
159 femoral artery mechanical injury, mice with homozygous deletion of p21Cip1 displayed accelerated pro
160 l injury was markedly increased in mice with homozygous deletion of p27(Kip1), characterized by promi
161 g Kras(G12D) activation with heterozygous or homozygous deletion of p53 (mean survival of 56 weeks vs
163 d mammary tumor formation in mice carrying a homozygous deletion of p53, uncovering a complex relatio
165 llele and mouse embryonic fibroblasts with a homozygous deletion of PERK exhibited attenuated phospho
171 tion conditions, which was associated with a homozygous deletion of PTEN, the first reported in MM.
174 iological roles of RINT-1, we found that the homozygous deletion of Rint-1 caused early embryonic let
177 otes UVB-induced skin tumorigenesis, whereas homozygous deletion of SIRT1 suppresses skin tumor devel
184 sis in mice skin in vivo using mice with the homozygous deletion of the C-terminal transcriptional ac
191 mouse embryo fibroblasts (MEF) or MEF with a homozygous deletion of the Gab1 gene (-/- MEF) with H(2)
193 T-ALL samples harbored either a mutation or homozygous deletion of the gene FBW7, a ubiquitin ligase
194 regulated by promoter hypermethylation or by homozygous deletion of the gene locus in certain cancers
201 further demonstrate that this loss is due to homozygous deletion of the miR-31-encoding gene that res
204 with a mild form of JS were found to have a homozygous deletion of the NPHP1 gene identical, by mapp
211 nctional connectivity.SIGNIFICANCE STATEMENT Homozygous deletion of the Pten gene in neuronal subpopu
212 cancer-prone, heterozygous APC mutant mice, homozygous deletion of the Rad52 gene suppressed tumor g
213 blated by siRNA or chicken DT40 cells with a homozygous deletion of the RNF4 gene displayed increased
216 of acute myeloid leukemia (AML) in mice with homozygous deletion of the upstream regulatory element (
218 matic hydrocarbons found in tobacco smoke; a homozygous deletion of this gene in approximately 50% of
222 PR/Cas9, we created a transgenic line with a homozygous deletion of TpnC41C and compared its phenotyp
223 n and reduced apoptosis, in situ Conversely, homozygous deletion of TRAP1 delays prostatic tumorigene
224 endent homozygous frameshift mutations and a homozygous deletion of two exons in PIEZO2 that segregat
225 when donor and recipient were mismatched for homozygous deletion of UGT2B17, a gene expressed in GVHD
226 gene (UNC5B(-/flox)) and mice with targeted homozygous deletion of UNC5B in kidney epithelial cells
227 in human colorectal cancer (CRC) cells with homozygous deletion of VEGF alleles to determine the pot
233 alyses showed that all affected patients had homozygous deletions of a single SNP (rs721575) and thei
235 fetal liver (FL) cells from mice containing homozygous deletions of both STAT5a and STAT5b genes (ST
236 expressing Cre-recombinase to generate focal homozygous deletions of Cbp in the nucleus accumbens (NA
239 hromosome (PAC) contig encompassing a set of homozygous deletions of chromosome 16q23-24.1 found in p
241 t the increased viability of embryos bearing homozygous deletions of exon 11 may be due to expression
242 ess, the finding that murine embryos bearing homozygous deletions of exon 11 survive longer than embr
244 ific alterations included amplifications and homozygous deletions of genes not yet implicated in epen
245 expressing Cre recombinase to generate focal homozygous deletions of Hdac3 in area CA1 of the dorsal
248 f nephronophthisis cases are caused by large homozygous deletions of NPHP1, but six genes responsible
253 ulation of murine embryonic fibroblasts with homozygous deletions of the c-src, fyn, and yes genes fa
257 e found 28% to 45% hemizygous and 15% to 57% homozygous deletions of the OLFM4 gene via fluorescence
259 that biallelic PTEN inactivation, by either homozygous deletion or deletion of one allele and mutati
262 rvival motor neuron protein (SMN) due to the homozygous deletion or rare point mutations in the survi
263 d adenoid cystic carcinomas reported to have homozygous deletion or significant underexpression of AS
265 ments were observed in this study indicating homozygous deletions or insertions in the breast tumor D
266 ructural signatures that distinguish between homozygous deletions over recessive cancer genes and fra
270 its role is controversial, e.g., some DMBT1 homozygous deletions reflect unmasking of constitutional
271 s been identified in a 120-kb critical tumor homozygous deletion region (found in lung and breast can
272 a(2+)-channel complex, was identified in the homozygous deletion region of chromosome 3p21.3 in human
273 18 different ESTs localized adjacent to the homozygous deletion showed the presence of a transcript
274 o 18 kb) located on chromosome 22 and even a homozygous deletion smaller than 1 kb with high-resoluti
276 e that, whereas nuclear pore proteins of the homozygous deletion strain are devoid of O-GlcNAc, nucle
277 tive markers, we created approximately 3,000 homozygous deletion strains affecting 674 genes, or roug
278 all mice with Kras(G12D) activation and Pten homozygous deletion succumbed to cancer by 3 weeks of ag
279 Likewise, newly discovered PCR-validated homozygous deletions suggested candidate tumor-suppresso
280 r, the gene has not been reported to undergo homozygous deletion, suggesting that DICER1 is haploinsu
283 -stage, sarcomatous histology and P16/CDKN2A homozygous deletion to be significant independent advers
284 ration of tobacco use, the OR for p16(INK4A) homozygous deletion was 1.3 (95% CI, 0.5-3.0) and 1.9 (9
285 rian aging phenotype of the Wv mice, whereas homozygous deletion was accompanied by a compensatory in
287 n KLF5, and neither promoter methylation nor homozygous deletion was detected in any of the cell line
290 reviously characterized loci, two regions of homozygous deletion were found, one near the PTPRD locus
293 ach other, as irreversible mutations such as homozygous deletions were frequently not inherited from
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