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1 to gene duplication and loss (and sometimes horizontal gene transfer).
2 inhibitory effect of changes in the code on horizontal gene transfer.
3 ncer of AT-rich genetic material acquired by horizontal gene transfer.
4 rine nutrient cycles, and act as vectors for horizontal gene transfer.
5 nerally assumed that antibiotics can promote horizontal gene transfer.
6 ene tree error correction in the presence of horizontal gene transfer.
7 phylogenetic trees, even in the presence of horizontal gene transfer.
8 ly applicable to gene families unaffected by horizontal gene transfer.
9 lycosyltransferase (gtr) operons acquired by horizontal gene transfer.
10 omic plasticity, most probably maintained by horizontal gene transfer.
11 evolutionary escape through mutagenesis and horizontal gene transfer.
12 to bacteria that acquire the systems through horizontal gene transfer.
13 in Acanthamoeba castellanii probably through horizontal gene transfer.
14 diverse, and include adhesion, motility, and horizontal gene transfer.
15 interactions, and extensive lineage-specific horizontal gene transfer.
16 uggesting that the phages were integrated by horizontal gene transfer.
17 es that appear to be rearrayed in nature via horizontal gene transfer.
18 r RNA-based interactions between species and horizontal gene transfer.
19 ated organelles and demonstrates the role of horizontal gene transfer.
20 eased in complexity via gene duplication and horizontal gene transfer.
21 riven by a combination of common descent and horizontal gene transfer.
22 at a given taxonomic level and frequency of horizontal gene transfer.
23 ing, competition, community structuring, and horizontal gene transfer.
24 in traditionally defined species and rampant horizontal gene transfer.
25 independently reported as a possible case of horizontal gene transfer.
26 s these genes may be prone to spread through horizontal gene transfer.
27 portance of habitat and niche in structuring horizontal gene transfer.
28 non-toxigenic strain to a toxin producer by horizontal gene transfer.
29 ocesses including global biogeochemistry and horizontal gene transfer.
30 colonization, transmission, persistence, and horizontal gene transfer.
31 nt force in bacterial evolution by promoting horizontal gene transfer.
32 ring-splitting dioxygenase genes acquired by horizontal gene transfer.
33 serotype 1 associated and likely products of horizontal gene transfer.
34 , twitching motility, biofilm formation, and horizontal gene transfer.
35 nteraction, motility, biofilm formation, and horizontal gene transfer.
36 icrobes within an ecosystem and facilitating horizontal gene transfer.
37 -monophyletic distribution, an indication of horizontal gene transfer.
38 ith implications for genetic engineering and horizontal gene transfer.
39 cause anthrax have been acquired recently by horizontal gene transfer.
40 rticillium acquired Ave1 from plants through horizontal gene transfer.
41 sy, including gene fission, convergence, and horizontal gene transfer.
42 ecently acquired one-quarter of all genes by horizontal gene transfer.
43 sses such as selection, gene duplication, or horizontal gene transfer.
44 promoted their distribution across phyla by horizontal gene transfer.
45 teria cannot become resistant by mutation or horizontal gene transfer.
46 ere acquired by one or both lineages through horizontal gene transfer.
47 nvironmental conditions and by the action of horizontal gene transfer.
48 om Fusarium oxysporum f. vasinfectum through horizontal gene transfer.
49 lso influences its evolution by facilitating horizontal gene transfer.
50 of other strains, indicating acquisition by horizontal gene transfer.
51 ferent strains, with many likely acquired by horizontal gene transfer.
52 ntragenomic but can also be acquired through horizontal gene transfer.
53 ment of the SBF transcription factor through horizontal gene transfer.
54 al mutations but has never been reported via horizontal gene transfer.
55 on bacterial cellular differentiation during horizontal gene transfer.
56 on biases, suggesting their acquisitions via horizontal gene transfer.
57 sterol biosynthesis genes with bacteria via horizontal gene transfer.
58 lates bacterial mutation, recombination, and horizontal gene transfer.
59 to mycoplasmas and have been disseminated by horizontal gene transfer.
60 e TgtA5 family is consistent with widespread horizontal gene transfer.
61 onary events including gene duplications and horizontal gene transfers.
62 mids drive genomic diversity in bacteria via horizontal gene transfer [1, 2]; nevertheless, explainin
63 baumannii, a species known to undergo rapid horizontal gene transfer, 16.2% of isolate pairs conside
66 erating ESBL-producing clones with continued horizontal gene transfer across genera, addressing this
69 PIs represent a major source of intrageneric horizontal gene transfer and a stealth conduit for inter
70 genase (DcmA) that has been acquired through horizontal gene transfer and allows the strain to grow o
72 xpected roles for CRISPR loci as barriers to horizontal gene transfer and as modulators of gene expre
73 tion of molecular features are likely due to horizontal gene transfer and changes in serogroup distri
77 events such as speciation, gene duplication, horizontal gene transfer and gene loss, and inferring th
78 ages have a history of extensive and ongoing horizontal gene transfer and loss, as evidenced by the l
80 es that impart genetic isolation by impeding horizontal gene transfer and now depend on the use of sy
83 of the four gap regions indicated potential horizontal gene transfer and recombination events import
84 of magnitude and evidence of recombination, horizontal gene transfer and variable fragment numbers.
85 istant bacteria, increases opportunities for horizontal gene transfer, and enables intrusion of patho
86 tic environment is considered a hot-spot for horizontal gene transfer, and lake sediments offer the o
87 obally important microbes through mortality, horizontal gene transfer, and metabolic reprogramming.
88 esistance to viruses, genetic isolation from horizontal gene transfer, and prevention of environmenta
89 ient sensing, stress response, modulation of horizontal gene transfer, and virulence factor expressio
90 ts but also is due to their rapid evolution, horizontal gene transfers, and intimate interactions wit
91 utative non-metazoan origin, indicating that horizontal gene transfers are frequent within this group
93 on, mobility elements (genes responsible for horizontal gene transfer between bacteria such as transp
94 e that this RM system is sufficient to block horizontal gene transfer between clinically important MR
95 plays a clonal population structure in which horizontal gene transfer between different lineages is e
96 f these host RNAs elicits the possibility of horizontal gene transfer between eukaryotic hosts that s
97 type (Apis or Bombus), we detected signs of horizontal gene transfer between G. apicola and S. alvi,
98 lineages of red algae acted as mediators of horizontal gene transfer between prokaryotes and photosy
100 igin and evolution of REV, and indicate that horizontal gene transfer between virus families can expa
101 t a recent acquisition from bacteria through horizontal gene transfer, but it was acquired very early
104 ccharide utilization locus (PUL) obtained by horizontal gene transfer by the gut bacterium Bacteroide
105 ClpG disaggregase homologs acquired through horizontal gene transfer by the species Pseudomonas aeru
107 for the acquisition of secreted proteins by horizontal gene transfer can help predict emerging zoono
109 e effects of autoimmunity and curtailment of horizontal gene transfer caused by the defense systems a
110 wed the definition of gene gains and losses, horizontal gene transfers, conservation and evolutionary
113 and demonstrates a novel mechanism by which horizontal gene transfer directly impacts virulence thro
115 scuous spread of the mcr-1 gene by efficient horizontal gene transfer dominated by a limited number o
116 iral integration, a fundamental mechanism of horizontal gene transfer driving prokaryotic evolution,
117 ontent, challenging previous hypotheses that horizontal gene transfer effectively decouples resistome
118 ate that conjugative elements play a role in horizontal gene transfer even more significant than prev
119 this lineage originated from a single large horizontal gene transfer event between CC23 and the hype
120 -adding enzymes of animals originated from a horizontal gene transfer event in the stem lineage of Ho
121 lysis of the Cpt gene family suggests that a horizontal gene transfer event introduced this gene into
122 sly un-annotated genes, and help to identify horizontal gene transfer events across microbial species
123 ollen transmission of organelles or multiple horizontal gene transfer events as the source of the mit
124 ell wall-modifying enzymes point at multiple horizontal gene transfer events from soil bacteria to ba
126 tching enzymes recruited via two independent horizontal gene transfer events into an existing metabol
127 In addition to endosymbiotic gene transfer, horizontal gene transfer events occurring before, during
128 exchange genetic material via phage-mediated horizontal gene transfer events, but, in turn, are vulne
129 in Earth history as a result of a series of horizontal gene transfer events, explaining the lack of
130 thotype Ro1, identify putative effectors and horizontal gene transfer events, map gene expression thr
133 17%) of genes originating through functional horizontal gene transfer (fHGT) and speculated that fHGT
135 oniae, an important human pathogen, mediates horizontal gene transfer for the development of drug res
137 last (apPOL) was putatively acquired through horizontal gene transfer from a bacteriophage and is cla
139 n was co-opted by competent bacteria through horizontal gene transfer from a eukaryotic source, and l
140 ase (GS) III in the prasinophytes evolved by horizontal gene transfer from a member of the heterokont
147 ic pathways across the partners' genomes and horizontal gene transfer from diverse bacteria into the
148 s: some of them were likely acquired through horizontal gene transfer from extremophile bacteria whic
149 nts, including genes originally obtained via horizontal gene transfer from fungi and bacteria, contri
151 ions identified putative CAZymes obtained by horizontal gene transfer from marine bacteria, which sug
153 ts with evolutionary histories suggestive of horizontal gene transfer from other marine bacterioplank
157 adaptation seems to have been facilitated by horizontal gene transfer from various bacteria and archa
158 c criteria that help to distinguish putative horizontal gene transfers from the admixture of genes fr
159 at numerous other coexisting processes (e.g. horizontal gene transfers, gene duplication and subseque
164 Despite the importance of phages in driving horizontal gene transfer (HGT) among pathogenic bacteria
166 and phylogenomics are subject to noise from horizontal gene transfer (HGT) and bias from convergence
167 rokaryotic genomic islands (GIs) involved in horizontal gene transfer (HGT) are the classical pathoge
170 hat mosquito RIP genes derived from a single Horizontal Gene Transfer (HGT) event, probably from a cy
173 omain-encoding genes through two independent horizontal gene transfer (HGT) events before the origin
174 ave been reported to have elevated levels of horizontal gene transfer (HGT) events, but how important
175 symmetron and Branchiostoma) acquired GFP by horizontal gene transfer (HGT) from copepods or cnidaria
176 ished cases that support the hypothesis that horizontal gene transfer (HGT) has played a role in the
177 ar gene transfer (IGT) or between species by horizontal gene transfer (HGT) has played an important r
179 ex." This assumes without justification that horizontal gene transfer (HGT) in bdelloids precludes th
180 hts into the complex evolutionary history of horizontal gene transfer (HGT) in the MAST-4 lineage.
181 ARB); b) identifying and describing rates of horizontal gene transfer (HGT) in the relevant environme
182 Natural transformation is one mechanism of horizontal gene transfer (HGT) in Vibrio cholerae, the c
183 GTree database provides putative genome-wide horizontal gene transfer (HGT) information for 2472 comp
184 nsformation, represents a major mechanism of horizontal gene transfer (HGT) involved in the acquisiti
193 rs genes vertically within lineages, whereas horizontal gene transfer (HGT) moves genetic material be
197 I examine some key findings on the extent of horizontal gene transfer (HGT) revealed by comparative g
199 ns, making them prone to viral predation and horizontal gene transfer (HGT) through transformation an
213 idian genomes also have gained genes through horizontal gene transfers (HGT), a process that could al
215 ole-genome duplication (in M. incognita) and horizontal gene transfers (HGTs) represent major forces
216 ic elements that contribute substantively to horizontal gene transfer, host adaptation, and virulence
217 uted to a range of complex factors including horizontal gene transfer, hypoxia, and biofilm formation
218 th of bacterial hosts containing ARGs and/or horizontal gene transfer immediately following slurry ap
223 ate population diversity, recombination, and horizontal gene transfer in closely related Bp isolates,
224 a new study suggests a much larger role for horizontal gene transfer in physiological adaption throu
226 patterns of plasmids, reveals the impact of horizontal gene transfer in rapidly generating new patho
228 ombination, indicating an important role for horizontal gene transfer in the recent evolution of pQBR
230 rial appendages that play important roles in horizontal gene transfer, in spread of antibiotic resist
231 commodating for biological phenomena such as horizontal gene transfer, incomplete lineage sorting, an
232 rol (restrict) the influx of foreign DNA via horizontal gene transfer into the bacterium while mainta
241 t a nuclear-encoded protein resulting from a horizontal gene transfer is targeted to a bacterial symb
243 sexual reproduction is unknown in the FOSC, horizontal gene transfer may contribute to the observed
244 tribution of antibiotics to the promotion of horizontal gene transfer may have been overestimated.
245 s based on the protease domain suggests that horizontal gene transfer may have occurred from a single
246 S ribosomal RNA phylogenies, suggesting that horizontal gene transfer may have played an important ro
247 s based on the protease domain suggests that horizontal gene transfer might have occurred from an ssR
248 k highlights an important limiting factor in horizontal gene transfer, namely, the capacity of the re
249 cusing on the primary evolutionary forces of horizontal gene transfer, natural selection, and migrati
250 E grouped YSLPVs with algae, suggesting that horizontal gene transfer occurred between giant viruses
251 e M1 progenitor strain before acquisition by horizontal gene transfer of a large chromosomal region e
253 from this population also reveal very recent horizontal gene transfer of novel, divergent cas gene ca
254 r words, there must be pervasive and ongoing horizontal gene transfer of self-splicing introns into e
255 e rapid evolution of bacterial pathogens via horizontal gene transfer of virulence determinants.
256 uding acquisition of positive traits through horizontal gene transfer or the modification of existing
257 the safeguard by spontaneous mutagenesis or horizontal gene transfer, or because they can be circumv
258 n resistance in S. aureus can emerge through horizontal gene transfer originating from coagulase-nega
259 t miropin was acquired from the host through horizontal gene transfer, perhaps facilitated by the lon
266 pproaches towards studying endosymbiotic and horizontal gene transfer processes, discusses the new kn
268 cule repertoires of both have benefited from horizontal gene transfer, Pseudonocardia spp. have relie
271 accurate inference of gene trees affected by horizontal gene transfer remains a largely unaddressed p
272 are likely to be implicated in a history of horizontal gene transfer, reside in a genome of 19.7 Mbp
273 ibiotics directly regulate the efficiency of horizontal gene transfer, serve as a selection force to
274 y of bidnaviruses emphasizes the key role of horizontal gene transfer, sometimes between viruses with
275 eover, the abundance of elements involved in horizontal gene transfer suggests their key roles in the
276 high or very low substitution rates without horizontal gene transfers, supermatrix approaches outper
277 mong bdelloid rotifers is more likely due to horizontal gene transfer than to meiotic sex." This assu
278 l competence for transformation is a mode of horizontal gene transfer that is commonly used by bacter
279 Conjugation is the primary mechanism of horizontal gene transfer that spreads antibiotic resista
280 When microbes acquire new abilities through horizontal gene transfer, the genes and pathways must fu
282 disinfection should destroy ARGs, to prevent horizontal gene transfer to downstream bacteria, little
284 ngeal glands, some of which were acquired by horizontal gene transfer, to manipulate host processes a
286 ed that pirAB(vp) may be lost or acquired by horizontal gene transfer via transposition or homologous
288 ed a 24 kb capsule synthesis island (cps) by horizontal gene transfer which consists of a synthetic l
289 g to an otherwise relatively anemic level of horizontal gene transfer, which nevertheless appears to
290 lant DHNA-CoA thioesterases originate from a horizontal gene transfer with a bacterial species of the
292 res are characteristically mosaic, driven by horizontal gene transfer with other phages and host geno
293 he importance of post-transfer refinement in horizontal gene transfer, with potential applications in
294 erred events of homologous recombination and horizontal gene transfer within 79 bacterial species.
295 monstrate the role of the oral resistome and horizontal gene transfer within and between commensals i
296 ranslatable by other bacteria, which impacts horizontal gene transfer within the human microbiota.
297 framework to study the dynamics of bacterial horizontal gene transfer within the intestinal environme
298 d distribution of the operon via independent horizontal gene transfer within the symbiotic plasmid or
299 e of function and ecology, underscoring that horizontal gene transfer without extensive regulatory ch
300 pact through mortality, nutrient cycling and horizontal gene transfer, yet their study is limited by
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