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1 arnesylated-methylated KRAS4b, including the hypervariable region.
2 obility analysis of the second envelope gene hypervariable region.
3 ha and Vbeta chain usage, and throughout the hypervariable region.
4 ed flanking domains and the other within the hypervariable region.
5 A gene sequences by more than 80% for the V4 hypervariable region.
6 r more p44 species were found within the p44 hypervariable region.
7 racterized by conserved sequences flanking a hypervariable region.
8 y charged lysine at position 12 of the first hypervariable region.
9 id pattern as well as a distinctive 16S rRNA hypervariable region.
10 ed except for sequence that encoded the MSP2 hypervariable region.
11 lyzed using 16S rRNA sequencing of the V3-V4 hypervariable region.
12 nt cells, and we mapped this activity to the hypervariable region.
13 regions, including splice site acceptors and hypervariable regions.
14 imilar magnitude were found in conserved and hypervariable regions.
15 have the same canonical structures in their hypervariable regions.
16 anonical structure in their first and second hypervariable regions.
17 ites for peptide-MHC complexes formed by six hypervariable regions.
18 arranged T cell receptor beta (TCRbeta) gene hypervariable regions.
19 not exclusively, directed against the hexon hypervariable regions.
20 is is further complicated by the presence of hypervariable regions.
21 of hepatitis C virus (HCV) contains several hypervariable regions.
22 Viral quasispecies in the second envelope hypervariable region 1 (E2/HVR1) and 5' untranslated reg
23 A population study of heteroplasmy in the hypervariable region 1 (HV1) portion of the human mtDNA
25 amino acid quasispecies complexities of the hypervariable region 1 (HVR-1) were less in the responde
27 edly reduced binding when amino acids within hypervariable region 1 (HVR1) and at sites approximately
30 HCV internal ribosomal entry site (IRES) and hypervariable region 1 (HVR1) in autopsy-derived brain,
34 which we find maps to a specific site within hypervariable region 1 (HVR1) of AdV5 hexon, has no appa
35 f HCV and shielding of important epitopes by hypervariable region 1 (HVR1) of E2 are believed to be m
39 studies suggested that genetic variation in hypervariable region 1 (HVR1) of the second envelope pro
42 to Huh7.5 cells to produce a quasispecies of hypervariable region 1 (HVR1) that mimicked that circula
45 notype-specific epitopes of HCV core, E1, E2 hypervariable region 1 (HVR1), E2 HVR1-plus-HVR2 consens
46 of cDNA that spanned the E1 gene and the E2 hypervariable region 1 (HVR1), followed by analysis of c
53 d, ranging from high diversity (the envelope hypervariable region 1 [HVR1]) to almost no diversity (t
54 te populations, we compared mtDNA (400 bp of hypervariable region 1 and 14 restriction site polymorph
55 paA/B proteins confirmed the central role of hypervariable region 1 in receptor binding and demonstra
56 h relapse were virtually identical, with the hypervariable region 1 of E2 appearing to be monoclonal,
57 on of SR-BI governed by specific residues in hypervariable region 1 of E2 leading to enhanced cell en
60 is virus (VSV)/HCV pseudotype model that the hypervariable region 1 of the HCV E2 envelope glycoprote
61 o 986 present-day human sequences located in hypervariable region 1 of the mitochondrion to estimate
64 equence revealed amino acid substitutions in hypervariable region 1 that were responsible for a drama
65 yethylene glycol to a specific site in hexon hypervariable region 1 yielded vector particles that wer
67 so generated serological responses to OMP-1g hypervariable region 1, indicating that humans and mice
68 cases, correlate also with antibodies to the hypervariable region 1, previously thought to be the pri
69 s, suggesting purifying selection, except in hypervariable region 1, where positive selection pressur
72 lotype analysis and direct sequencing of the hypervariable regions 1 and 2 of the D-loop in muscle an
73 tes microbial communities, but sequencing of hypervariable regions 1-3 of the 16S rRNA gene provides
75 this finding with previous reports that the hypervariable region 3 (V3) of gp120 plays an important
77 uted the majority of binding energy, whereas hypervariable region 4 (HV4) and framework region 3 (FR3
79 a single immunization of chimeric rAd5 hexon hypervariable region 48 (rAd5HVR48) vectors expressing S
80 igen (PA) as a model antigen to characterize hypervariable region 5 (HVR5) of hexon as a site for pep
82 l with mutations in the surface glycoprotein hypervariable regions: a previously identified variant c
83 e for viral replication, and the nsp2 middle hypervariable region (aa 324 to 813) tolerated 100-aa or
84 MiSeq and Roche454 platforms using the V3-V4 hypervariable region also showed a high level of concord
85 oximately 30 to 35 kDa consisting of several hypervariable regions alternating with conserved regions
86 ue to a mixture of P44 proteins with diverse hypervariable region amino acid sequences expressed by a
87 kines was localized to 40 amino acids in the hypervariable region (amino acids 301-340) of the protei
90 hanges both within the traditionally defined hypervariable regions and downstream, near the 3'-end of
91 sing from the crystal structure that include hypervariable regions and the epitope of a neutralizing
92 creased frequency of B cells with long third hypervariable regions, and distal J(kappa) gene segment
94 r multiple markers such as the 16S rRNA gene hypervariable regions are available, MetAmp improves the
97 e, and -f were mapped within the nsp2 middle hypervariable region, but no conserved cleavage sites co
98 ive RNA splicing primarily in its N-terminal hypervariable region, but the functions of these isoform
101 the second constant region through the fifth hypervariable region (C2 to V5) of the surface envelope
103 ts and the genes from the other intraspecies hypervariable regions contributes to a better assessment
105 dies demonstrate that sequences in the third hypervariable region determine the specificity of corece
109 monella typhimurium phase 1 flagellin, this "hypervariable" region encodes two solvent-exposed domain
110 cally infected individuals by sequencing the hypervariable regions encoding TCR alpha and beta polype
111 lysis indicated that most sites outside this hypervariable region experienced strong negative selecti
113 se pseudogenes encode unique surface-exposed hypervariable regions flanked by conserved domains, whic
114 extension containing a His- and Asp/Glu-rich hypervariable region followed by a highly conserved sequ
115 identified in at least two of five examined hypervariable regions for every virus, suggesting the ev
116 d for identification of the 16S rRNA gene V3 hypervariable region from Escherichia coli genomic DNA.
118 g it into our Ad5 vector containing all nine hypervariable regions from Ad43, Ad5.H(43m-43), increase
119 the specific amplification of 18s rRNA gene hypervariable regions from eukaryotic microbes: anneal-i
120 two primer pairs demonstrated that the V3-V4 hypervariable region had significantly better capture of
121 etion variants of UreG demonstrated that the hypervariable region has a minor impact on activation ef
122 ta domains shows that their first and second hypervariable regions have one of three or four differen
123 by the novel gene p44-61 (p44-61/18), whose hypervariable region (hv) was a chimera of p44-20hv and
126 face protein 2 (MSP2), composed of a central hypervariable region (HVR) flanked by highly conserved r
127 me of the hepatitis E virus (HEV) contains a hypervariable region (HVR) in ORF1 that tolerates small
128 rnesylated and positively charged C-terminal hypervariable region (HVR) is critical to its oncogenic
129 sed on chromosomal DNA fingerprints (CDF), a hypervariable region (HVR) of a 5.6-kb plasmid, the rRNA
131 man ribosomal protein S17 (RPS17) within the hypervariable region (HVR) of the HEV ORF1 protein.
133 n, predominately against the surface-exposed hypervariable region (HVR) rather than against the invar
135 Comparative sequence analysis revealed a hypervariable region (HVR) with extensive sequence varia
136 st distribution of polymorphisms occurs in a hypervariable region (HVR) within the carboxy third of t
137 cently, insertions and rearrangements of the hypervariable region (HVR) within the HEV genome, allowi
138 -Ras4B is predominantly autoinhibited by its hypervariable region (HVR), whereas the GTP-bound state
140 of the HCV envelope gene including the first hypervariable region (HVR-1) was reverse transcription-P
143 Reactivity of antibody against the first hypervariable region (HVR1) of HCV in donor and recipien
144 quence diversity and complexity at the first hypervariable region (HVR1) of the second envelope prote
146 ing antibodies typically recognize M protein hypervariable regions (HVRs) and confer narrow protectio
147 at CaM preferentially binds unfolded K-Ras4B hypervariable regions (HVRs) and not alpha-helical HVRs.
148 h substantial sequence homology in the hexon hypervariable regions (HVRs) and suppressed the immunoge
151 maeric rAd5 vectors in which the seven short hypervariable regions (HVRs) on the surface of the Ad5 h
152 us catalytic domains and flexible C-terminal hypervariable regions (HVRs) that differ across Ras isof
153 amino acid sequence variations confirms four hypervariable regions (HVRs), separated by regions under
156 set in which the DNA sequence data come from hypervariable region I and the mutation of interest is t
160 60 million molecules) of human mitochondrial hypervariable region II amplicon was introduced into the
161 Here we show that the human mitochondrial hypervariable region II can function as a molecular fing
162 esent high-throughput sequencing analysis of hypervariable region II for spatial resolution of the co
163 the structural and physiological role of the hypervariable region in flagella assembly, stability and
165 on-typeable H.influenzae isolates revealed a hypervariable region in the central portion of the mod g
166 e induction of Gal-3 expression requires the hypervariable region in the extracellular domain of beta
168 oci within A. lyrata, sites corresponding to hypervariable regions in the Brassica S-loci (SLG and SR
169 Thus, for at least the first and second hypervariable regions in the currently known structures,
173 conversion of the entire (nonsegmental) p44 hypervariable region including flanking regions with a c
174 sitive to GM-CSF, mutations within the N-Ras hypervariable region induced N-Ras mislocalization and a
176 th most of the differences restricted to the hypervariable regions known to undergo sequence variatio
177 differences in the primary sequences of the hypervariable region manifest in different secondary str
178 genomic expression site encoding the central hypervariable region matched sequence polymorphisms in m
179 in primary structure within the immunogenic hypervariable region microdomains and tested whether the
180 QA1*0501, and DRB1 alleles sharing the first hypervariable region motif (9)EYSTS(13) were major risk
181 ted nanoclustering of H-ras helix alpha4 and hypervariable region mutants that have different bona fi
183 .1 M bacterial pyrotag sequences from the V6 hypervariable region of 16S rRNA genes from 38 influent
184 human hepatoma cells when inserted into the hypervariable region of a genotype 1 strain, but this ch
185 g a shift from recombination of the complete hypervariable region of a given pseudogene to complex mo
187 s recovered, 39 recognized an amino-terminal hypervariable region of an outer membrane protein (OMP),
189 a crucial but commonly coded residue in the hypervariable region of CDR3 provide the basis for the s
190 anged p44Es revealed that the entire central hypervariable region of donor p44 pseudogenes or of dono
191 rough elevated signal produced to the unique hypervariable region of each - 2/114 in HL-60, 3/114 in
195 utagenesis studies revealed that the central hypervariable region of flagellin is essential for the T
197 tration calorimetry, we demonstrate that the hypervariable region of K-Ras4B contributes in a major w
198 nce for four short sequential changes in the hypervariable region of msp2 coupled with the identifica
199 histocompatibility antigens, we examined one hypervariable region of mtDNA, designated hypervariable
204 r results show that in the murine model, the hypervariable region of PilE is required to activate imm
205 nal structure-based antigen by replacing the hypervariable region of PilE with an aspartate-glutamine
206 ly bound to the CAAX motif in the C-terminal hypervariable region of Rac1, and then inhibited Rac1 me
207 ow that elements in the known domains in the hypervariable region of Ras (amino acids 170-189) intera
210 zed by bar-coded pyrosequencing of the V3-V5 hypervariable region of the 16S rRNA gene, defining 662
211 ent study, using pyrosequencing of the V1-V2 hypervariable region of the 16S rRNA gene, reported find
212 Our study included the analysis of the D1/D2 hypervariable region of the 28S ribosomal gene and the i
215 idase subunit 1 gene of nematodes and the V3 hypervariable region of the bacterial 16 s ribosomal RNA
216 d a tag-sequencing strategy targeting the V6 hypervariable region of the bacterial small-subunit (16S
218 ndings indicate that sequence variation in a hypervariable region of the degron affects JAZ stability
219 relatively small genomic segment, the first hypervariable region of the E2 gene, it is possible that
220 manifestations of disease are clustered in a hypervariable region of the genome termed the plasticity
221 rminants of macrophage infectivity to the V3 hypervariable region of the HIV-1 envelope glycoprotein.
224 This residue is located in the C-terminal hypervariable region of the proteins and is not conserve
226 al property variations of the NH(2)-terminal hypervariable region of TnT may have a role in tuning th
228 nd ESPRIT-Tree, sequence data from different hypervariable regions of 16S rRNA were used and binning
229 cultures of strains NY-31, NY-36, and NY-37, hypervariable regions of 450 deduced amino acid sequence
230 serotype 5 (Ad5) vector containing the hexon hypervariable regions of Ad serotype 48 (Ad48) and expre
231 hexon-modified vector that carried the hexon hypervariable regions of Ad48, indicating that the SP mu
234 Finally, features of the first and second hypervariable regions of gp120 (V1V2) may be critical fo
235 peptides representing the N- and C-terminal hypervariable regions of murine rab3D recognized a prote
236 oes is efficiently surveyed by sequencing of hypervariable regions of the 16s ribosomal RNA (rRNA) ge
237 lyzed by FLX+ pyrosequencing of the V1 to V4 hypervariable regions of the 16S rRNA gene and polymeras
238 Unique melt profiles generated from multiple hypervariable regions of the 16S rRNA gene for 100 clini
239 dot blot hybridization, by sequences of two hypervariable regions of the 16S rRNA gene, and by the p
240 DNA was amplified with primer pairs covering hypervariable regions of the 16S rRNA gene: primers 63F
241 iversity of sequence, primarily localized to hypervariable regions of the capsid protein, was detecte
244 ensic identity testing by sequencing the two hypervariable regions of the human mtDNA control region.
245 Conventional genotyping methods target small hypervariable regions of the M. bovis genome and provide
248 ences between D1 domains are concentrated in hypervariable regions on the front sheet strands of the
249 bit antisera raised against either the first hypervariable region or ectodomain of E2 showed limited
250 several single-nucleotide substitutions in a hypervariable region outside the SAM-binding core can al
251 g GC and AT rich motifs correlated well with hypervariable region recombination sites across the HAdV
254 lagellin mutant composed of only the central hypervariable region retained substantial TNF-alpha-indu
256 quences follows the pattern of conserved and hypervariable regions seen in other S-RNases, but no reg
259 elope protein (Env) by replacing part of its hypervariable region sequence with a sequence encoding t
260 ing more than 1.7 million bacterial 16S rRNA hypervariable region sequences from 52 to 56 samples per
261 Results obtained from the V3-V4 16S rRNA hypervariable region, sequencing on the MiSeq and Roche4
263 method also identified 18 other intraspecies hypervariable regions, such as the capsule and lipooligo
264 key changes to the lipidation pattern of the hypervariable region, suggest that dimerization is a gen
265 rmining residues (SDRs), the residues of the hypervariable region that are most critical in Ag-Ab int
266 ermini flanking the central, surface-exposed hypervariable region that represents the variant B lymph
267 n that all serotypes have in common from the hypervariable regions that are responsible for capsid di
269 mice, suggesting that in the absence of the hypervariable region, the conserved regions of PilE alon
271 a gonorrhoeae and contains a surface-exposed hypervariable region thought to be one feature of pili t
272 s in the mtDNA control region, including the hypervariable regions typically sequenced in a forensic
273 existence of a conserved region linked to a hypervariable region upstream of the 16S rRNA gene of H.
274 two species by pyrosequencing the 16S V1-V3 hypervariable regions using the 454 GS FLX Titanium plat
275 pected microbial profiles, sequencing of the hypervariable regions V1-V3 of the 16S ribosomal RNA gen
276 Previous studies have shown that the first hypervariable region (V1 loop) is immunogenic on soluble
277 ies (NAbs) that primarily targeted the first hypervariable region (V1 loop) of gp120, although SF162g
278 to potential N-linked glycosylation sites in hypervariable regions (V1 to V3) of the env gene of HIV
279 lope glycoproteins, the presence of all five hypervariable regions (V1 to V5) was required for optima
282 had greater accuracy than sequencing of the hypervariable region V4 in determining genus and species
286 ehrlichiosis (HGE) with primers flanking the hypervariable region, we show differential expression in
290 d by genetic manipulation of the murine CC49 hypervariable regions were evaluated for their relative
293 units by the PKS modules is influenced by a "hypervariable region", which could be manipulated via co
294 ting phage binding were located in these two hypervariable regions, which are likely to be exposed on
295 analysis indicates that alternative 16S rRNA hypervariable regions will present similar challenges, w
296 -DR alleles sharing amino acids at the third hypervariable region with DRB1*0401(shared epitope) are
298 pha segments and 90 % of Vbeta segments have hypervariable regions with a conformation of one of the
299 s identified as phage morons were located in hypervariable regions within individual SVMs, indicating
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