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1 pylar endosperm) and RAD (radicle plus lower hypocotyl).
2 ght cues (e.g., positive phototropism in the hypocotyl).
3 ed the site of light perception to the upper hypocotyl.
4 tic lesions were observed at the base of the hypocotyl.
5 ous and occurs more prominently in the basal hypocotyl.
6 m, phloem, and primary xylem in the stem and hypocotyl.
7 l controls of cell elongation in Arabidopsis hypocotyl.
8 cell elongation in different regions of the hypocotyl.
9 owth phenotype, deetiolation of the seedling hypocotyl.
10 ontrolled elongation of the seedling stem or hypocotyl.
11 em, unable to flow into the vasculature of a hypocotyl.
12 ross the epidermis below the meristem in the hypocotyl.
13 levels as well as in chloroplast size in the hypocotyl.
14 along the length of the Arabidopsis thaliana hypocotyl.
15 tability are aberrant in etiolated xxt1 xxt2 hypocotyls.
16 that promotes cell elongation in Arabidopsis hypocotyls.
17 veral candidate regulators in the elongating hypocotyls.
18 growth, and, in etiolated seedlings, shorter hypocotyls.
19 issect their trafficking routes in etiolated hypocotyls.
20 growth of Arabidopsis (Arabidopsis thaliana) hypocotyls.
21 resulting in low activity of PIF3 and short hypocotyls.
22 rlapping patterns of expression in etiolated hypocotyls.
23 transcript and late flowering and elongated hypocotyls.
24 psi1-1 seedlings have shorter roots and hypocotyls.
25 in the cotyledon tissue but not meristems or hypocotyls.
26 extent of axial cell expansion in dark-grown hypocotyls.
27 elongated cell types of roots and dark-grown hypocotyls.
28 duced by excising roots from low-light-grown hypocotyls.
29 R sensitivity in leaves and petioles but not hypocotyls.
30 h in rapidly elongating roots and dark-grown hypocotyls.
31 genes are defective in stomata formation in hypocotyls.
36 n of the organ boundary gene LIGHT-SENSITIVE HYPOCOTYL 4 restored RZ function and stem growth in the
37 f5 (pifq) mutants; the dynamics of ELONGATED HYPOCOTYL 5 (HY5) and LONG HYPOCOTYL IN FAR-RED (HFR1) p
38 ion of the transcription activator ELONGATED HYPOCOTYL 5 (HY5) that is associated with chromatins of
39 Whereas the bZIP proteins, HY5 (elongated hypocotyl 5) and HYH (HY5 homologue), are degraded by CO
40 latory and two inhibitory modules, while for hypocotyls, a single inhibitory module is sufficient.
41 (IAA) transport and its accumulation in the hypocotyl above the point of excision where adventitious
42 clarify cell-specific auxin function in the hypocotyl and highlight the complexity of cell type inte
44 OP1 and the four SPA genes are essential for hypocotyl and leaf petiole elongation in response to low
45 reduction of GA4 causes severe inhibition of hypocotyl and root elongation, which can be rescued by e
46 g2 double mutants show defects in fertility, hypocotyl and root growth, and responses to light and su
49 ABP1 on transcriptomic changes in dark-grown hypocotyls and investigated the consequences of gene exp
50 PGX1(AT) plants, PGX2(AT) plants have longer hypocotyls and larger rosette leaves, but they also uniq
51 esolved gravitropism measurements of atlazy1 hypocotyls and primary inflorescence stems showed a sign
54 detected in the epidermal layers of leaves, hypocotyls and roots; in the root, it was predominantly
56 ar interactions in the plant embryonic stem (hypocotyl), and analyzing these using quantitative netwo
57 root initiation in the Arabidopsis thaliana hypocotyl, and we demonstrate that they act by modulatin
60 tosis to endoreplication was lower in abcb19 hypocotyls, and fluorescence microscopy showed the CCS52
62 of IBA is much lower than IAA in Arabidopsis hypocotyls, and the transport mechanism is distinct from
63 al targeting approach therefore excludes the hypocotyl apex as the site for light perception for phot
64 -GFP (P1-GFP) expression was targeted to the hypocotyl apex of the phot-deficient mutant using the pr
65 te in more detail the functional role of the hypocotyl apex, and the regions surrounding it, in estab
66 n of CUC3::P1-GFP was clearly visible at the hypocotyl apex, with weaker expression in the cotyledons
72 ds expression of Bn-FAE1.1 into the axis and hypocotyl but also acts negatively to repress expression
74 to far-red shade by the cotyledons triggers hypocotyl cell elongation and auxin target gene expressi
79 over, we demonstrate that Golgi transport in hypocotyl cells can be accurately predicted from the act
80 in microtubule dynamics in spr1 eb1b mutant hypocotyl cells correlated well with the severity of gro
81 n cytoskeleton in both growing and elongated hypocotyl cells has structural properties facilitating e
82 ar cortical microtubule arrays in dark-grown hypocotyl cells organize into a transverse coaligned pat
83 induces approximately 80% of the light-grown hypocotyl cells to form transverse arrays over a 2-h per
87 l assays, the basal halves of APY-suppressed hypocotyls contained considerably lower free indole-3-ac
88 n mtp8-2 mutant, Mn no longer accumulates in hypocotyl cortex cells and sub-epidermal cells of the em
91 or instance, secondary growth of Arabidopsis hypocotyls creates a radial pattern of highly specialize
96 wth medium greatly enhances the reduction in hypocotyl elongation and cellulose content of shv3svl1 T
98 ole of phyA-dependent CKI1 expression in the hypocotyl elongation and hook development during skotomo
99 functionally implicated in the inhibition of hypocotyl elongation and known to be a direct target of
100 me 2 (CRY2) mediate blue light inhibition of hypocotyl elongation and long-day (LD) promotion of flor
101 t receptor that mediates light inhibition of hypocotyl elongation and long-day promotion of floral in
107 adruple pifq mutant displays clearly reduced hypocotyl elongation compared to wild-type in response t
108 emonstrate that the magnitude of Suc-induced hypocotyl elongation depends on the day length and light
109 light/dark cycles, we found that Suc-induced hypocotyl elongation did not occur in tps1 mutants and o
111 iologically, Glc and BR interact to regulate hypocotyl elongation growth of etiolated Arabidopsis (Ar
112 -6 double mutant displayed severe defects in hypocotyl elongation growth similar to its bri1-6 parent
115 at, when overexpressed, resulted in enhanced hypocotyl elongation in etiolated Arabidopsis thaliana s
117 nt with ethylene or auxin inhibitors reduced hypocotyl elongation in PIF4 overexpressor (PIF4ox) and
120 e fluence rate response where suppression of hypocotyl elongation increases incrementally with light
123 elicits shade- and high temperature-induced hypocotyl elongation largely independently of 3-IPA-medi
126 Mutation in DET1 changed the sensitivity of hypocotyl elongation of mutant seedlings to GA and paclo
127 articipates positively in the control of the hypocotyl elongation response to plant proximity, a role
128 ophore inactivation and associated disparate hypocotyl elongation responses under far-red (FR) light.
130 ts in fertility, and enhanced sensitivity of hypocotyl elongation to red but not to far-red or blue l
132 ight- and phytochrome-mediated regulation of hypocotyl elongation under red (R) and FR illumination.
136 reviously uncharacterized LHE (LIGHT-INDUCED HYPOCOTYL ELONGATION) gene, which we show impacts light-
137 ppressed chlorophyll synthesis, promotion of hypocotyl elongation, and formation of a closed apical h
138 active in KAI2-dependent seed germination or hypocotyl elongation, but both were active in AtD14-depe
139 rphogenesis, as illustrated by inhibition of hypocotyl elongation, cotyledon opening, and leaf greeni
140 induction of seed germination, inhibition of hypocotyl elongation, induction of cotyledon opening, ra
141 e overexpressors has differential effects on hypocotyl elongation, leaf shape, and petiole length, as
142 e of these genes in the control of greening, hypocotyl elongation, phyllotaxy, floral organ initiatio
143 g deoxystrigolactones to inhibit Arabidopsis hypocotyl elongation, regulate seedling gene expression,
144 ure in distinct developmental traits such as hypocotyl elongation, root elongation, and flowering tim
145 lthough only SMAX1 regulates germination and hypocotyl elongation, SMAX1 and SMXL6,7,8 have complemen
156 tation of Arabidopsis (Arabidopsis thaliana) hypocotyl epidermal cells, dynamic cortical microtubules
157 aliana with transcriptional profiling of the hypocotyl epidermis from Brassica rapa, we show that aux
160 localized synthesis of ABCB19 protein after hypocotyl excision leads to enhanced IAA transport and l
162 comparison, average speed in the A. thaliana hypocotyl expressing GFP-AtCESA6 was 184 +/- 86 nm min(-
165 gical significance of BR-mediated changes in hypocotyl graviresponse lies in the fact that BR signali
166 the circadian clock, and we review seedling hypocotyl growth as a paradigm of PIFs acting at the int
168 night temperature difference [-DIF]) inhibit hypocotyl growth in Arabidopsis (Arabidopsis thaliana).
171 g is required in many cell types for correct hypocotyl growth in shade, with a key role for the epide
172 xpression, coinciding with the initiation of hypocotyl growth in the early evening, is positively cor
173 brief heat shocks enhance the inhibition of hypocotyl growth induced by light perceived by phytochro
176 me and root growth; control of cotyledon and hypocotyl growth requires simultaneous phyA activity in
179 and the conditional use of GA-ATHB5-mediated hypocotyl growth under optimal conditions may be used to
181 ses of gene expression, cotyledon unfolding, hypocotyl growth, and greening observed in the phyA muta
182 e changes of single hypocotyl protoplasts or hypocotyl growth, both at high temporal resolution.
183 is both necessary and sufficient to initiate hypocotyl growth, but we also provide evidence for the f
184 with the negative regulatory role of HOS1 in hypocotyl growth, HOS1-defective mutants exhibited elong
186 ic diurnal variation in Arabidopsis thaliana hypocotyl growth, we found that cellulose synthesis and
187 ing phenotypes, including increased stem and hypocotyl growth, which increases the likelihood of outg
188 g converge to influence the transcription of hypocotyl growth-promoting SAUR19 subfamily members.
199 UV-B also stabilizes the bHLH protein LONG HYPOCOTYL IN FAR RED (HFR1), which can bind to and inhib
200 date a previously unidentified role for long hypocotyl in far red 1, a negative regulator of the PIFs
201 levels of the transcriptional cofactor LONG HYPOCOTYL IN FAR RED1, which also binds to PIF1 and othe
203 mics of ELONGATED HYPOCOTYL 5 (HY5) and LONG HYPOCOTYL IN FAR-RED (HFR1) proteins; and the epistatic
205 lves the COP1/SPA ubiquitination target LONG HYPOCOTYL IN FR LIGHT1 but not ELONGATED HYPOCOTYL5.
206 anced activity in the vascular region of the hypocotyl in response to cotreatment of Suc and sulfonam
207 Arabidopsis (Arabidopsis thaliana) Short Hypocotyl in White Light1 (SHW1) encodes a Ser-Arg-Asp-r
209 of free auxin in specialized organs such as hypocotyls in response to shade and high temperature.
212 tivity in specific regions of both roots and hypocotyls, in good correlation with transcriptomic data
214 in transport and that auxin transport in the hypocotyl is a prerequisite for phot1-dependent hypocoty
216 IF- and light-regulated stomata formation in hypocotyls is critically dependent on LLM-domain B-GATA
218 e with Sl-MMPs in the apoplast of the tomato hypocotyl, it exhibited increased stability in transgeni
220 ined, these results show that PIF3 regulates hypocotyl length downstream, whereas PIF4 and PIF5 regul
221 ntrast to pif4 and pif5 mutants, the reduced hypocotyl length in pif3 cannot be rescued by either ACC
222 delineate Arabidopsis (Arabidopsis thaliana) hypocotyl length kinetics in response to ethylene and sh
223 h downstream, whereas PIF4 and PIF5 regulate hypocotyl length upstream of an auxin and ethylene casca
224 th AtHY5, which does not cause any change in hypocotyl length when overexpressed in Arabidopsis, the
225 BBX19 expression by RNA interference reduces hypocotyl length, and its constitutive expression promot
226 t factors that impact the photoregulation of hypocotyl length, we conducted comparative gene expressi
233 e amplitude of the rhythms of late elongated hypocotyl (LHY) and circadian clock associated1 (CCA1) e
234 sic mutant alleles accumulate LATE ELONGATED HYPOCOTYL (LHY) and CIRCADIAN CLOCK ASSOCIATED1 (CCA1) s
235 DIAN CLOCK ASSOCIATED1 (CCA1)/LATE ELONGATED HYPOCOTYL (LHY) and the evening gene TIMING OF CAB EXPRE
236 clock associated 1 (CCA1) and late elongated hypocotyl (LHY) to restrict their expression to near daw
239 rcadian clock gene P. hybrida LATE ELONGATED HYPOCOTYL (LHY; PhLHY) regulates the daily expression pa
240 Finally, the decreased XyG abundance in hypocotyl longitudinal cell walls of germinating embryos
241 pstream regulators we identified a LONG PALE HYPOCOTYL (LPH) gene whose activity is indispensable for
246 also disordered the cellular arrangement of hypocotyls of Arabidopsis plants, resulting in a decreas
247 organ (cotyledons) and in rapidly elongating hypocotyls of Arabidopsis thaliana PIFs initiate transcr
254 n CIRCADIAN CLOCK ASSOCIATED1/LATE ELONGATED HYPOCOTYL or GIGANTEA demonstrated their requirement for
255 ng SAUR63:GFP or SAUR63:GUS fusions had long hypocotyls, petals and stamen filaments, suggesting that
256 OB3/AHL29 and ESC/AHL27 confer a subtle long-hypocotyl phenotype compared with the WT or either singl
258 ruption of BAS1 and SOB7 abolishes the short-hypocotyl phenotype of ATAF2 loss-of-function seedlings
259 background is likely causative for the long hypocotyl phenotype previously attributed to disrupted A
262 We measured either volume changes of single hypocotyl protoplasts or hypocotyl growth, both at high
264 ibuted differently within cotyledons and the hypocotyl/radicle axis in embryos of the oilseed crop Ca
265 odels predicted that the outer cotyledon and hypocotyl/radicle generate the bulk of plastidic reducta
270 ls of the unexpanded light-grown Arabidopsis hypocotyl results in a transient burst of anisotropic ce
272 vement of [(3)H]indole-3-acetic acid in both hypocotyl sections and primary roots of Arabidopsis seed
273 oy a custom image-based method for measuring hypocotyl segment elongation with high resolution and a
276 og BBX24 regulate deetiolation processes and hypocotyl shade avoidance response in an additive manner
277 ed from upper (growing) regions of 3-day-old hypocotyls showed ploidy levels to be lower in abcb19 mu
279 ss of ClpP3 (clpp3-1) leads to arrest at the hypocotyl stage; this developmental arrest can be remove
280 evel of basipetally transported auxin in the hypocotyl than did wild-type seedlings, and had wavy hyp
282 signaling sensitizes the dark-grown seedling hypocotyl to the presence of obstacles, overriding gravi
284 ulations available for Arabidopsis etiolated hypocotyls to clarify how auxin is perceived and the dow
287 Cell elongation in the basal part of the hypocotyl under -DIF was restored by both 1-aminocyclopr
290 Loss-of-function mutants show an elongated hypocotyl under far-red light and are impaired in other
293 This newly synthesized auxin moves to the hypocotyl where it induces elongation of hypocotyl cells
294 ngs grow initially through elongation of the hypocotyl, which is regulated by signaling pathways that
295 bidopsis thaliana line with longer etiolated hypocotyls, which overexpresses a gene encoding a polyga
296 expansion; for example, epidermal cells from hypocotyls with reduced CP are longer than wild-type cel
297 -based reporter of mitosis throughout abcb19 hypocotyls without an equivalent effect on mitosis promp
300 iformly expressed throughout the Arabidopsis hypocotyl, yet decapitation experiments have localized t
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