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1 pression of the drl2-Mo17 allele in the Mo17 inbred.
2 ion population, comprising 279 diverse maize inbreds.
3 been described in two Iowa Stiff Stalk (SS) inbreds.
4 zygous), Virunga Mountain Gorilla (78.12 %), inbred Abyssinian cat (62.63 %), Tasmanian devil, domest
5 the well-characterized Utah 30th generation inbred accession--and grew 183 plants in the glasshouse
8 in laboratory mice, partly because they are inbred and genetically homogeneous, can be genetically m
9 fects ID and the potential for purging using inbred and outbred Drosophila melanogaster larvae expose
14 uma.SIGNIFICANCE STATEMENT Our evidence that inbred and outbred rats learn to control the duration of
17 Here, two genomes for Mo17 (a modern maize inbred) and mexicana are assembled using a meta-assembly
18 opulation sequence data from 488 recombinant inbred Arabidopsis thaliana genomes, we identified 6502
19 matography analyses demonstrate that the two inbreds are highly differentiated in their metabolite pr
20 d trait is robust as it improves yield in an inbred as well as in a panel of hybrids, at several loca
22 ntal gradient from four maize genotypes (the inbreds B73 and Mo17, and the reciprocal hybrids B73 x M
23 erformed using 14-day-old maize seedlings of inbreds B73, Mo17, Oh43, PH207 and B37 under control, co
24 obust MSI, this capacity was impaired in the inbred BTBR T+tf/J mouse model of idiopathic autism.
25 larval stage also increased the lifespan of inbred but not outbred adults, suggesting that the benef
27 d qMotor in SOD1(G93A) transgenic mice in an inbred C57BL/6J background, hereafter called iSOD1(G93A)
32 xperimental nerve injury is increased in the inbred DA strain compared with the PVG strain and is ass
33 the whole-genome sequencing and assembly of inbred derivatives of its two wild parents, P. axillaris
34 ple stages of metazoan development, using 80 inbred Drosophila wild isolates, identifying thousands o
35 ed and outbred families, we demonstrate that inbred families have reduced larval survival and that th
42 rg719Trp (RW/+), VM/+ mice with an identical inbred genetic background lacked hallmarks of HCM such a
46 wo loci having repulsion linkage between two inbreds, heterosis in the hybrid can appear as a single
49 unlike mice or rats, which are deliberately inbred in a laboratory to minimize variation between ani
50 Mo17 (IBM) populations of maize recombinant inbreds, indicating that this gene may be agronomically
60 s) for the interspecific Petunia recombinant inbred line (RIL) population - P. axillaris x P. exserta
61 ou9308's high yield potential, a recombinant inbred line (RIL) population derived from cross of Xieqi
62 basis of high yield potential, a recombinant inbred line (RIL) population derived from the cross betw
63 cessions, Col-0 and Bur-0, and a recombinant inbred line (RIL) population derived from these parents
64 rphisms (SNPs) identified in the recombinant inbred line (RIL) population of ICC 4958 (drought tolera
67 y genome sequence is available for the elite inbred line BTx623, but functional validation of genes r
68 hen introgressed by backcross into the maize inbred line PH09B, the mutant phenotype of vyl lasted mu
69 we generated a draft genome assembly of the inbred line PH207 to complement and compare with the exi
70 f samples in a subtropical maize recombinant inbred line population (CML444 x SC Malawi) subjected in
71 (Lemont) by indica (Teqing) rice recombinant inbred line population and focused on the genetic variat
77 easurement of gene expression in recombinant inbred line populations has enabled investigation of the
78 from ear, tassel, and leaf of the B73 public inbred line were constructed at four developmental stage
79 -RIL (nested association mapping-recombinant inbred line) populations indicated that the drl loci res
80 y 313.4-Mb genome sequence of a bottle gourd inbred line, USVL1VR-Ls, with a scaffold N50 of 8.7 Mb a
83 1-2 (ddm1-2)-derived epigenetic recombinant inbred lines (epiRILs) in Arabidopsis thaliana is well s
84 c contribution to heterosis using epigenetic inbred lines (epiRILs) with varying levels and distribut
85 ight-week old male mice from two recombinant inbred lines (LGXSM-6 and LGXSM-33) were subjected to ax
86 ecture of local adaptation using recombinant inbred lines (RIL) derived from a cross between two loca
87 ia as well as in a collection of recombinant inbred lines (RILs) derived from indica Jasmine-type var
88 ter:sweet compounds by analysing recombinant inbred lines (RILs) from an interspecific lettuce mappin
93 identified in earlier studies with the same inbred lines and associated with biometrical, physiologi
94 es of several commonly used maize (Zea mays) inbred lines and has been anecdotally linked to enhanced
95 ragenotypic variability), we used Drosophila inbred lines and measured the spontaneous locomotor beha
96 mine the level of genetic diversity in INERA inbred lines and patterns of relationships of these inbr
97 ints of floral transition of almost 30 maize inbred lines and show that tropical lines exhibit a dela
99 ated how the genetic divergence of the maize inbred lines B73 and Mo17 and their F1 hybrid progeny is
100 criptomic divergence of the maize (Zea mays) inbred lines B73 and Mo17 and their reciprocal F1 hybrid
101 me shotgun (WGS) sequences for the two maize inbred lines B73 and Mo17 using k-mer analysis to quanti
104 are not specific to the Col-Cvi recombinant inbred lines but have an epigenetic state that is inhere
106 We produced 1,636 MAGIC maize recombinant inbred lines derived from eight genetically diverse foun
108 r castaneus map, and a map constructed using inbred lines derived predominantly from M. m. domesticus
109 lines and patterns of relationships of these inbred lines developed from two sources; and (3) examine
111 Arabidopsis thaliana epigenetic recombinant inbred lines found no evidence in support of any role fo
112 of DNA methylation in five maize (Zea mays) inbred lines found that while DNA methylation levels for
113 AM) population, comprising 4,998 recombinant inbred lines from 25 biparental families, and in an asso
116 d 219 soybean accessions and 152 recombinant inbred lines genotyped with high-density markers and phe
118 urally dispersing populations of recombinant inbred lines of Arabidopsis thaliana segregating early a
119 this issue by exposing a set of recombinant inbred lines of Arabidopsis thaliana to a simulated glob
120 llocation among floral whorls in recombinant inbred lines of Brassica rapa in multiple environments t
121 of reproduction over ontogeny in recombinant inbred lines of Brassica rapa in the field and glasshous
123 in Mozambique was compared among recombinant inbred lines of common bean (Phaseolus vulgaris) having
125 variation of defensin genes was examined in inbred lines of Leghorn and Fayoumi chickens, and a dupl
126 l coma recovery) in the unrelated, sequenced inbred lines of the Drosophila melanogaster Genetic Refe
127 s at 1, 2, and 4 wk of age in the sequenced, inbred lines of the Drosophila melanogaster Genetic Refe
128 ariation in gene expression in the sequenced inbred lines of the Drosophila melanogaster Genetic Refe
129 a recovery time, in the unrelated, sequenced inbred lines of the Drosophila melanogaster Genetic Refe
130 ter stages of development in 197 recombinant inbred lines of two different maize (Zea mays) populatio
131 eate large numbers of mutant embryos without inbred lines opens exciting new possibilities for studyi
132 lly expressed genes between the two parental inbred lines significantly exceeded those of parent vers
133 d the number of active genes in the parental inbred lines significantly independent of treatment.
134 00 years has produced elite maize (Zea mays) inbred lines that combine to produce high-yielding hybri
135 ng of seedling RNA from 503 maize (Zea mays) inbred lines to characterize the maize pan-genome, we id
136 because genetic variation among wild-derived inbred lines was much lower than predicted from a neutra
137 INERA and 41 exotic (temperate and tropical) inbred lines were characterized using 1057 SNP markers t
138 ve tissues from 27 genetically diverse maize inbred lines were deeply sequenced to identify genes exh
139 closely examined beta-costic acid-deficient inbred lines were found to harbor Zmtps21 pseudogenes la
141 on tests on the maize-282-diverse-panel (282 inbred lines) under normal (25 degrees C) and chilling (
143 notypes, a mapping population of recombinant inbred lines, and a dense single-nucleotide polymorphism
144 using an independent population of backcross inbred lines, derived from the same parents, which allow
145 s demonstrated by characterizing recombinant inbred lines, including Oh43, which has a point mutation
147 ments from seedlings in a variety of Pioneer inbred lines, routinely recovering healthy, fertile T0 p
148 tential hybrids derived from 210 recombinant inbred lines, selection of the top 10 hybrids predicted
149 duction fixes recombinant haploid genomes in inbred lines, shaving years off the breeding process.
150 lone establishes systemic infection in maize inbred lines, sorghum (Sorghum bicolor), and green foxta
151 -induced volatiles among 26 maize (Zea mays) inbred lines, we conducted a nested association mapping
152 conditions in three Brachypodium distachyon inbred lines, we describe the identification and the mai
153 Exploiting wild accessions and recombinant inbred lines, we reveal extensive phenotypic variation i
154 l root length' (TRL) were predicted for 2431 inbred lines, which had previously been genotyped by seq
162 genetic diversity in a diverse set of maize inbred lines; (2) determine the level of genetic diversi
163 TL) in the Intermated B73 x Mo17 recombinant inbred maize (Zea mays) population using pyrolysis molec
164 on, comparative optical mapping of two other inbred maize lines revealed a prevalence of deletions in
166 y (AS) panel consisting of 74 diverse set of inbred maize lines were screened for seedling root trait
169 5 trans-loci were identified in shoots of an inbred mapping population of Brassica rapa (IMB211 x R50
172 show that B cells and serum antibodies from inbred mice demonstrate a reproducible ID hierarchy to t
173 aborative Cross (CC), a large panel of newly inbred mice that captures 90% of the known variation amo
174 n tumors derived from a panel of recombinant inbred mice to identify a network of co-expressed genes
175 red the retinal pathology of Crb1(rd8/rd8)/J inbred mice with that of two Crb1(rd8/rd8) lines backcro
176 irus induces diabetes in restricted lines of inbred mice, the susceptibility genes to virus-induced d
177 ularly important for model organisms such as inbred mice, where LD extends much further than in human
183 t that received cecal microbes from C57BL/6J inbred mice; however, durability of choline diet-depende
189 mouse strain, and the mtDNA from a different inbred mouse strain to examine the genome-wide nuclear D
190 mice, that contain the nuclear DNA from one inbred mouse strain, and the mtDNA from a different inbr
195 hese assays are ubiquitously performed using inbred mouse strains and mutations placed on inbred gene
196 ng inflammation and toxicity across multiple inbred mouse strains and to use genome-wide association
197 ly mirrored in a murine genetic model, where inbred mouse strains are differentially susceptible to H
198 st several days of infection.IMPORTANCE Most inbred mouse strains are relatively resistant to orthopo
201 transcription factors between crosses of two inbred mouse strains to elucidate the regulatory mechani
202 ulin resistance, and glucose metabolism in 3 inbred mouse strains with differing susceptibilities to
203 erin 23 gene (Cdh23(c.753A)), common to many inbred mouse strains, accelerates age-related hearing lo
205 n lung tissue from two genetically divergent inbred mouse strains, C57BL/6J and CAST/EiJ, both in une
206 perturbations on the gut microbiota of five inbred mouse strains, mice deficient for genes relevant
207 ough urinary Mup protein levels vary between inbred mouse strains, this difference is most pronounced
209 and molecular traits in more than 100 unique inbred mouse strains, which were fed a diet rich in fat
211 otropic ERV subgroup largely confined to the inbred mouse Y chromosome.envvariations define three E-M
214 at maternal care improves the performance of inbred offspring more than that of outbred offspring.
216 e earliest maize from San Marcos was already inbred, opening the possibility for Tehuacan maize culti
218 individuals from three genetic backgrounds (inbred - outbred) into a novel environment at three foun
221 of gene expression in the relevant tissue in inbred parental samples, which are not always available
223 dulating (nod-) and nodulating (nod+) sister inbred peanut lines, E4/E5 and E7/E6, and their nod+ par
224 -quality genome assembly for the elite maize inbred PH207 expands our knowledge of the breadth of nat
226 lleles, and subsequent phenotypic changes in inbred plants, inbreeding may alter plant-insect interac
227 ere, using a novel approach for screening an inbred population of laboratory animals, we identified t
228 ceptible) were used to develop a recombinant inbred population with future goals of identifying genom
229 ffects are likely to be most acute in small, inbred populations exhibiting environmental sex determin
230 y in response to male skews and declines for inbred populations occurred at lower male skews than for
231 g can uncover rich genetic diversity even in inbred populations, and introduces a novel strategy to d
232 ions are predicted to be expressed in small, inbred populations, reducing both individual fitness and
234 e been conducted in Arabidopsis thaliana, an inbred primarily self-fertilizing species that should ha
235 ation of renal water reabsorption, using the inbred rat strain SHR-A3 as an animal model with disrupt
236 male and male mice from the same recombinant inbred (RI) strain have the same genomic components exce
237 ced lung collagen content in BXD recombinant inbred (RI) strains and identified significant linkage o
239 ates ZEBOV infection of primates better than inbred rodent models, is useful for dissecting key event
240 nsive CNV exists within Fayette, a released, inbred SCN-resistant soybean cultivar with a high copy n
241 d genome-wide association analyses using the inbred, sequenced lines of the Drosophila melanogaster G
242 sticity for three quantitative traits in the inbred, sequenced lines of the Drosophila melanogaster G
245 that this approach is even more relevant in inbred species such as rice (Oryza sativa L.), which are
246 cts have been successful in many haploid and inbred species, the assembly of noninbred or rearranged
250 identical to that of any other CC strain or inbred strain for which prior data are available, indica
251 rthermore, we demonstrate that the C3H/HeSnJ inbred strain has late onset cerebellar degeneration due
252 ad coverage of approximately 30-fold from an inbred strain medaka (Oryzias latipes), we observed that
253 sting using multiple genotypes revealed that inbred strain siblings do not cooccupy at higher rates t
255 The castaneous (CAST) mouse, a wild-derived inbred strain, is highly susceptible to orthopoxvirus in
256 tomic data from the mouse hippocampus of six inbred strains (129S1/SvImJ, A/J, C57BL/6J, DBA/1J, DBA/
257 e carry out deep sequencing of 13 additional inbred strains (BUB/BnJ, C57BL/10J, C57BR/cdJ, C58/J, DB
258 cly available genome sequences of 36 popular inbred strains and provide lists for each strain of prot
260 e methylation patterns seen among laboratory inbred strains are also found in a free-living populatio
261 he hybrid mouse diversity panel (HMDP) of 83 inbred strains as a surrogate for human natural immune v
265 s to study wild house mice and to create new inbred strains from wild populations have the potential
266 physiology from an array of BXD recombinant inbred strains identified a segment on chromosome 4 cont
267 rom eight inbred strains to females from two inbred strains of house mice (Mus musculus domesticus).
268 kemia viruses (MLVs) are found in the common inbred strains of laboratory mice and in the house mouse
269 s leading to acute heart injury in different inbred strains of mice also suggest that this response h
270 haracterize hypothalamic transcriptome in 99 inbred strains of mice from the Hybrid Mouse Diversity P
271 the less potent S-baclofen enantiomer in two inbred strains of mice that display low sociability and/
272 Diversity Panel data, which consisted of 100 inbred strains of mice, we identified 97 DMCs that were
273 NKT cell number and function among different inbred strains of mice, we investigated whether the role
278 novel insertions exist in every lab strain, inbred strains of the Drosophila Genetic Reference Panel
283 n the neonatal lung by exposing mice from 36 inbred strains to hyperoxia (95% O2) for 72 h after birt
284 ts, explain phenotypical differences between inbred strains, and increase the amount of interesting g
285 in mice have illustrated differences between inbred strains, but the possibility that mitochondrial g
286 th the use of a panel of MHC-III recombinant inbred strains, we found that the 33-kb Ltab-Ncr3 haplot
287 ipts showed significant variation across the inbred strains, with 22% of the transcriptome varying by
295 remodelling-features that were stable in the inbred, variable in the second, but virtually absent in
297 s, Sprague Dawley and Long-Evans, and/or the inbred WAG/Rij strain (a rat model of heritable human ab
298 plasticity in TSS usage between tissues and inbreds was uncovered, with approximately 1500 genes sho
299 ilar to the distribution in the B73 parental inbred, whereas that of Mo17 x B73 resembles the Mo17 pa
300 se transcript pairs (NAT pairs) in two maize inbreds with different sensitivity to drought, as well a
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