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1 from other retroviral genera use tetrameric integrase.
2 ion catalyzed by a large SR, phage varphiC31 integrase.
3 riptase (NtRTI group) and 16 (20%) of 79 for integrase.
4 ally reduced level of inhibition against HIV integrase.
5 bly using site-specific recombination by C31 integrase.
6 nascent DNA combined with detection of viral integrase.
7 ral cellular and HIV proteins, including the integrase.
8 (CCD) and the C-terminal domain (CTD) of the integrase.
9 ith those observed for prototype foamy virus integrase.
10 ystem for understanding DDE transposases and integrases.
11 gether, tDNA) targets, catalyzed by tyrosine integrases.
13 We report single-DNA experiments for Bxb1 integrase, a model SR, where dynamics of individual syna
16 grase mutations were analyzed for effects on integrase activity in vitro and during virus infection,
18 nd host attB sites is promoted by the serine integrase alone, giving recombinant attL and attR sites,
20 a gene cluster encoding for transporters, an integrase and a dioxygenase were involved in BAC biotran
21 inding factor LEDGF/p75 interacts with HIV-1 integrase and directs integration to active transcriptio
22 ecombination reactions mediated by varphiC31 integrase and its RDF, and use these data as the basis f
23 n part determined by the interaction between integrase and lens epithelium-derived growth factor (LED
27 Here we describe an interaction between Ty1 integrase and the AC40 subunit of Pol III and demonstrat
29 logy of multiple mobile DNAs, imprecision of integrases and transposases, and differential activity a
32 applied bioinformatics to identify 34 phage integrases (and their cognate attB and attP recognition
33 otide and 100% protein identity to the VPI-1 integrase, and attachment (att) sites 100% identical to
34 m further insists that each island encode an integrase, and attachment site sequence identity is care
35 rgeting HIV reverse transcriptase, protease, integrase, and coreceptor CCR5 with EC50's ranging from
37 ilies of integrases, the tyrosine and serine integrases, and the advantages and disadvantages of each
38 enzymes-reverse transcriptase, protease, and integrase-and have had the satisfaction of knowing that
39 graphy, we determine an unexpected octameric integrase architecture for the intasome of the betaretro
46 ette carrying attP sites for phiC31 and Bxb1 integrases at the H11 locus by spontaneous or TALEN-assi
47 ions were each bordered by two nonhomologous integrase attachment (att) sites, which together compris
51 the molecular mechanism underlying the LEDGF integrase-binding domain (IBD) interaction with MLL fusi
52 93T cells lacking LEDGF/p75 or the LEDGF/p75 integrase-binding domain (IBD) showed that LEDGF/p75 con
53 ow, Kessl et al. report a second function of integrase: binding to the viral RNA genome in virion par
56 component and then are delivered to the ALB3 integrase by a GTP-dependent cpSRP-cpFtsY interaction.
58 approved antiviral compound that targets HIV integrase, can inhibit the nuclease function of human cy
60 e site-preference of integration by the Cas1 integrase (casposase) encoded by the casposon of the arc
64 n was mediated by the mycobacteriophage Bxb1 integrase-catalyzed recombination between attP and attB
66 The conserved Cas1 and Cas2 proteins form an integrase complex consisting of two distal Cas1 dimers b
67 oreign DNA into CRISPR loci by the Cas1-Cas2 integrase complex is promoted by a host factor, IHF (int
70 ering a homologous donor template (either an integrase-defective lentiviral vector or a DNA oligonucl
75 atalysis while another pair of non-catalytic integrase dimers bridge between the two viral DNA molecu
76 ic assembly of integrase, in which a pair of integrase dimers engage viral DNA ends for catalysis whi
77 r of prototype foamy virus, and two flanking integrase dimers that engage the core structure via thei
78 icient to catalyse integration, the flanking integrase dimers were necessary for mouse mammary tumour
83 of structurally distinct, kinetically stable integrase-DNA product complexes, dependent on the presen
86 These discoveries reveal mechanisms by which integrases dramatically manipulate bacterial genomes to
87 tionally discuss the latest advances on anti-integrase drug development for the treatment of AIDS and
88 redictable, and we describe a pair of serine integrases encoded by mycobacteriophages Bxz2 and Peache
91 tegrase-DNA complexes have been reported for integrase from prototype foamy virus featuring an additi
92 port a crystal structure of the three-domain integrase from Rous sarcoma virus in complex with viral
93 eukemia virus (MLV) system consisting of MLV-integrase fused to enhanced green fluorescent protein (M
94 he prevalence and persistence patterns of an integrase gene (int1), used as a proxy for integrons (wh
96 qnrA, sul1, tet(A), tet(W), and tet(X)], the integrase gene of class 1 integrons (intI1), and 16S rRN
97 e chromosomal location as VPI-1, contains an integrase gene with 94% nucleotide and 100% protein iden
98 peI), and DNases (spd1 and spd3), with phage integrase genes being present at one flank of each phage
99 e ICE integration and to confirm the role of integrase genes intS, intM, and intG in this process.
101 examined results of all clinically indicated integrase genotypic resistance tests (GRTs) performed at
102 ve virion assembly protein (gp17), the phage integrase (gp29), the endolysin (gp31), the phage repres
103 Approximately 1 in 6 US patients undergoing integrase GRT for clinical decision making harbors signi
105 Within the last 25 years, bacteriophage integrases have rapidly risen to prominence as genetic t
106 e strong human immunodeficiency virus type 1 integrase (HIV-1 IN) inhibitors in the low nanomolar ran
107 and a probe for a highly conserved region of integrase in the HIV-1 pol gene (the integrase single-co
108 to the degradation of RT and, in some cases, integrase in the virus particle and this abolishes infec
109 as the main cellular binding partners of MLV integrase (IN) and demonstrated their significance for e
110 been implicated in inhibiting homologous HIV integrase (IN) and influenza endonuclease via metal chel
111 n is catalysed by the virally encoded enzyme integrase (IN) and is facilitated by viral genus-specifi
113 that disrupts the interaction between HIV-1 integrase (IN) and the cellular factor lens epithelium-d
114 rder nucleoprotein complex composed of viral integrase (IN) and the ends of linear vDNA, mediates int
115 al integration is catalysed by a tetramer of integrase (IN) assembled on viral DNA ends in a stable c
117 evidence indicates that inhibition of HIV-1 integrase (IN) binding to the viral RNA genome by allost
123 ridine-based multimerization selective HIV-1 integrase (IN) inhibitors (MINIs) are a distinct subclas
128 ORTANCE Recent evidence indicates that HIV-1 integrase (IN) plays a key role during particle maturati
130 terations to the murine leukemia virus (MLV) integrase (IN) protein that successfully result in decre
135 se transcriptase (RT) inhibitors (NNRTI) and integrase (IN) strand transfer inhibitors (INSTI) are ke
137 otease (PR), reverse transcriptase (RT), and integrase (IN) variability presents a challenge to labor
138 D overlaps with the binding site for the HIV integrase (IN), and IN was capable of efficiently seques
139 f random, single-amino-acid mutants in HIV-1 integrase (IN), covering >40% of amino acid positions.
142 ation is catalysed by the retrovirus-encoded integrase (IN), which forms a tetramer or octamer comple
143 and strand transfer (ST) functions of HIV-1 integrase (IN), while 7-aminosubstituted quinolinonyl de
147 The structure shows an octameric assembly of integrase, in which a pair of integrase dimers engage vi
150 (DTG), a human immunodeficiency virus (HIV) integrase inhibitor (INI), would be efficacious in INI-r
152 avir has been shown to be non-inferior to an integrase inhibitor and superior to a non-nucleoside rev
153 The findings support guidelines recommending integrase inhibitor based regimens in first-line antiret
154 nhibitor-based, 100% (95% CI, 91%-100%); and integrase inhibitor based, 95% (95% CI, 83%-99.4%).
156 appears to be a more favorable effect of the integrase inhibitor EVG over efavirenz on immune activat
157 d virological failure with resistance in the integrase inhibitor group compared with three participan
162 y acquired significant resistance to APV, an integrase inhibitor raltegravir, and a GRL-09510 congene
163 289 were randomly assigned to receive the integrase inhibitor regimen and 286 to receive the prote
164 the safety and efficacy of the single tablet integrase inhibitor regimen containing elvitegravir, cob
165 citabine, and tenofovir disoproxil fumarate (integrase inhibitor regimen) or ritonavir-boosted atazan
167 When present in certain combinations, some integrase inhibitor resistance mutations increased resis
171 human immunodeficiency virus type 1 (HIV-1) integrase inhibitor, was evaluated for distribution and
172 significantly shorter in those receiving an integrase inhibitor- versus a protease inhibitor-based r
176 genotypes exclude testing for resistance to integrase inhibitors ("IR testing"), although this class
178 inding to the viral RNA genome by allosteric integrase inhibitors (ALLINIs) or through mutations with
179 TIs (NNRTIs), protease inhibitors (PIs), and integrase inhibitors (IIs) did not affect HK2, except fo
182 e between pre- and post-integration latency, integrase inhibitors are routinely used, preventing nove
183 leoside reverse transcriptase inhibitors and integrase inhibitors are used to treat infection with HI
192 cleotide (e.g., human immunodeficiency virus integrase) inhibitors, in applications such as antisense
193 tion is mediated by a non-canonical tyrosine integrase (Int) lacking an N-terminal domain typically a
194 nase encoded by bacteriophage lambda [lambda Integrase (Int)] is responsible for integrating and exci
195 It is known that reverse transcriptase and integrase interact and that some mutations can disrupt t
196 ting preferences are in large part guided by integrase-interacting host factors (LEDGF/p75 for HIV-1
198 phaScreen binding assays, revealing that the integrase interacts with the N-terminal half of TRN-SR2
199 EDGF) and human immunodeficiency virus (HIV) integrase is an important possible strategy for anti-vir
200 d residue Q146 in the flexible loop of HIV-1 integrase is critical for productive viral DNA binding t
204 ltegravir, the antiretrovirus drug targeting integrase, is effective against various herpesviruses.
205 actively transcribed euchromatin, where the integrase-LEDGF/p75 interaction drives integration into
208 ites within the COL1A locus to enable phiC31 integrase mediated introduction of transgenes has been g
211 nding protein that determines the outcome of integrase-mediated site-specific recombination by redesi
219 m(B), sul1, tet(A), tet(W), and tet(X)), the integrase of class 1 integrons (intI1), 16S rRNA genes,
220 ecognition of NSD3, LANA of herpesvirus, and integrase of MLV, which involves formation of an intermo
221 istently HIV-1-negative for Gag (P = 0.007), Integrase (P < 0.001), Vif (P < 0.001), and Nef (P < 0.0
224 e direct interaction between TRN-SR2 and HIV integrase predominantly involves the catalytic core doma
227 ntibodies against p24, matrix, nucleocapsid, integrase, protease, and gp120, but low levels of antibo
228 re of each complex consists of a tetramer of Integrase protein (Int), which is a heterobivalent DNA b
229 s that focus on cellular components of viral integrase protein interactions can be used to combat the
231 s seem to be governed by the ability for the integrase protein to locally bend the DNA duplex for pai
234 ic process is catalyzed by the virus-encoded integrase protein, which is conserved among retroviruses
237 amino acid residue networks in the different integrase proteins, caused by polymorphic residues, whic
238 efficiency and single-protein convenience of integrase-RDF fusion proteins make them potentially very
239 or changes in the length and sequence of the integrase-RDF linker peptide did not affect fusion prote
240 n directionality factor (RDF) in addition to integrase; RDF activates attL x attR recombination and i
241 ese results explain how the Cas1-Cas2 CRISPR integrase recognizes a sequence-dependent DNA structure
242 ys258 were identified here as analogs of PFV integrase residues Ala188, Arg329 and Arg362, respective
244 led a network of prototype foamy virus (PFV) integrase residues that distort tDNA: Ala188 and Arg329
245 ients, only R263K and other previously known integrase resistance substitutions have been reported.
248 V) encodes four essential enzymes: protease, integrase, reverse transcriptase (RT)-associated DNA pol
249 T-cell responses to HIV-1 Gag, Protease, Integrase, Reverse Transcriptase, Vif, and Nef antigens
252 (HIV-1) protease, reverse transcriptase, and integrase sequences-three genes that are commonly sequen
254 gion of integrase in the HIV-1 pol gene (the integrase single-copy assay [iSCA]), and increasing the
256 d with outcomes in the iPrEx trial, Vif- and Integrase-specific T-cell responses were associated with
257 core, we have designed and synthesized a new integrase strand transfer (INST) inhibitor type featurin
258 metal binding pharmacophore required for HIV integrase strand transfer inhibition represents a vibran
259 d single or boosted drug, which should be an integrase strand transfer inhibitor (dolutegravir, elvit
261 The base case prevalence of transmitted integrase strand transfer inhibitor (INSTI)-resistant (I
267 , and tenofovir alafenamide is a once-daily, integrase strand transfer inhibitor-based regimen approv
270 All recent treatment guidelines recommend integrase strand transfer inhibitors (INSTIs) as compone
272 iveness of the first-generation FDA-approved integrase strand transfer inhibitors (INSTIs), raltegrav
273 present the discovery of a new class of HIV integrase strand transfer inhibitors based on the 2-pyri
274 reverse transcriptase inhibitors [NNRTIs]), integrase strand transfer inhibitors, and virus entry in
276 more detailed account of recent analyses of integrase structure follows, as they have provided valua
277 el, extended coiled-coil (CC) domains in the integrase subunits are proposed to interact in a way tha
279 NHL) superfamily, also called the retroviral integrase superfamily, groups together numerous enzymes
280 er between bacteria such as transposases and integrases) syntenic with ARGs were rare in soil by comp
281 Moreover, we demonstrate that a modified integrase system can also be used for the detection of e
282 e embryos with a plasmid bearing a varphiC31 integrase-targeted attB element and two dual beta-globin
284 he viral DNA ends and structurally mimic the integrase tetramer of prototype foamy virus, and two fla
285 prototype foamy virus revealed a functional integrase tetramer, and it is generally believed that in
286 inor" polymorphisms and substitutions in HIV integrase that are associated with these subtypes can in
288 the mechanisms of the two major families of integrases, the tyrosine and serine integrases, and the
290 CRISPR-Cas systems depend on the Cas1-Cas2 integrase to capture and integrate short foreign DNA fra
291 ces a sharp DNA bend, allowing the Cas1-Cas2 integrase to catalyze the first integration reaction at
292 antibody mimics the effect of binding of HIV integrase to LEDGF which is crucial for HIV propagation.
294 Previous structural characterization of integrase-viral DNA complexes, or intasomes, from the sp
295 exchange (DICE) mediated by phiC31 and Bxb1 integrases was used to insert genes of interest flanked
296 ta for the complex of TRN-SR2 with truncated integrase, we propose a molecular model of the complex.
297 le that are involved in the interaction with integrase were identified using AlphaScreen binding assa
298 02_AG) clonal viruses encoding G118R-bearing integrases were severely restricted in their viral repli
299 In addition, the G140S-Q148H (SH) mutant integrase, which has a reduced 3'-processing activity, b
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