コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 rgeted sequences resembling the Ty3 terminal inverted repeat.
2 r the HetR protein so far, a seven-base pair inverted repeat.
3 onucleotide corresponding to the Mu terminal inverted repeat.
4 ing transcription factor binding sites or an inverted repeat.
5 rangement, including large expansions of the inverted repeat.
6 upstream of tbpA and separated from it by an inverted repeat.
7 ymmetry centred on a conserved 5'-TAC/GTA-3' inverted repeat.
8 bacterial recombination site that is not an inverted repeat.
9 multiple genes that contain poorly conserved inverted repeats.
10 y in regions that contain numerous tandem or inverted repeats.
11 as does a pair of synthetically constructed inverted repeats.
12 repeats and is demarcated by 8-bp imperfect inverted repeats.
13 ends to underestimate the expected number of inverted repeats.
14 ter families, many of which contain internal inverted repeats.
15 n transposon target sites and their terminal inverted repeats.
16 tation, can generate a substantial excess of inverted repeats.
17 gments and genes interspersed with noncoding inverted repeats.
18 ints such as purine-rich tracts or direct or inverted repeats.
19 the production of small RNAs from endogenous inverted repeats.
20 rize, as their breakpoints often fall within inverted repeats.
21 ir respective initiator proteins arranged as inverted repeats.
22 acentric inversion sponsored by >300-kb-long inverted repeats.
23 L) and a unique short region (US) flanked by inverted repeats.
24 e polintovirus PolB gene along with terminal inverted repeats.
25 erated by flanking a DNA sequence with short inverted repeats.
26 ate short inversions, some flanked by paired inverted repeats.
27 namely sites of convergent transcription and inverted repeats.
30 ostly in intergenic and intron regions at an inverted repeat 1 motif in both groups, but also cluster
31 d repeat spaced by one nucleotide DNA motif, inverted repeat-1 (5'-AGGTCAcAGACCT-3'), as a likely FXR
32 ium coupled cotransporters of the five-helix inverted repeat (5HIR) superfamily use an alternating ac
37 rms around a single centromere flanked by an inverted repeat and was found as an independent chromoso
39 Rather, they are flanked by nearly identical inverted repeats and enclosed within direct repeats, sug
40 nontransposon sequences have longer terminal inverted repeats and higher GC content in terminal and s
41 o demonstrate a novel method for identifying inverted repeats and inversion variants, both of which c
43 aining segment, five 9-bp direct repeats, an inverted repeat, and a sigma(A)-dependent promoter for t
44 at involves both homology-driven events, via inverted repeats, and microhomologous or nonhomologous e
48 n an uncharacterized protein that we termed "Inverted Repeat Binding Protein (IRBP) 18" and its partn
49 ing of tandem copies of the ethanol receptor inverted repeat binding site, in combination with a mini
50 ls, slightly elevated templated mutations at inverted repeats but had no effect on deletions, simple
51 The edited cytidines are often flanked by inverted repeats, but are largely distinct from those de
52 ation that closed-circular DNA containing an inverted repeat can release the free energy stored in ne
54 h breakpoints embedded within long (>100 kb) inverted repeats can be genotyped by haplotype-fusion PC
55 its inherent instability in genomic DNA, the inverted repeat catalyzes spontaneous self-excision, res
56 s present in the cydDC promoter, and a 10-bp inverted repeat (CGGTGGTACCGGTACCACCG) was required for
57 terminal three nucleotides of the P-element inverted repeats complement and restore the original TSM
58 our of the breakpoint regions included large inverted repeats composed of repetitive gene clusters an
60 transgenic loci have two T-DNA copies in an inverted repeat configuration, centered at the right bor
61 sis of closely linked transposon ends in the inverted-repeat configuration and therefore suppresses t
62 l density analysis determined that the large inverted repeats constitute a recombination hot spot.
66 rocess where one copy of a small, imperfect, inverted repeat corrects the other copy via strand misal
67 he absence in M. truncatula of the prominent inverted repeat cpDNA sequence found in most plant speci
68 the target gene and sequence features of the inverted repeat did not reveal any factors capable of pr
71 is initiated by restricted expression of an inverted-repeat dsRNA specifically in the Arabidopsis (A
72 ed His-tagged RpaR (His(6)-RpaR) binds to an inverted repeat element centered 48.5 bp upstream of the
75 ion of intrachromosomal amplicons with large inverted repeats (equivalent to homogeneously staining r
77 on-target sequences that consist of two 13bp inverted repeats flanking a 6 or 8bp spacer sequence.
78 ind that Epe1 is preferentially recruited to inverted repeats flanking centromeres to restrain the sp
82 anism by which RNAs transcribed from the CHS inverted repeat form aberrant double-stranded RNAs that
83 a precursor in which an imperfectly matched inverted repeat forms a partly double-stranded region.
84 VC2773 and VC2772 form a parABS system with inverted repeats found near the large chromosome origin.
85 gestive of an evolutionary antecedent of the inverted repeats found within the subunits of many membr
87 sion of GCRs in other studies, we found that inverted repeat fusion has a profile of genetic regulati
90 e find that two checkpoint pathways suppress inverted repeat fusion, and that their activities are di
94 alensis and described proliferation of small inverted repeats (hairpins) that occurred in it since th
95 hybrid nixA-ureA promoters demonstrated that inverted repeat half-sites, spacers, and flanking DNA ar
97 ing of these cavities is synchronized by the inverted repeat helices 3 and 8, providing the structura
100 h operons requires YtrA, which recognizes an inverted repeat in front of its own operon and in front
101 leads to nicking of ICEBs1 between a GC-rich inverted repeat in oriT, and NicK was the only ICEBs1 ge
102 vated by BmaR1 and octanoyl-HSL, and a 20-bp inverted repeat in the bmaI1 promoter is required for bm
103 more, in human Colo320DM cancer cells, a DNA inverted repeat in the genome marks the border between a
104 e report here that a specific pair of nearby inverted repeats in budding yeast fuse to form a dicentr
105 hown that there is a large excess of perfect inverted repeats in many prokaryotic genomes but not in
106 finally we present results from a search for inverted repeats in the dog genome using both indel and
107 mation of large DNA palindromes and that DNA inverted repeats in the genome determine the efficiency
109 eaks (DSBs) introduced a large distance from inverted repeats in the yeast (Saccharomyces cerevisiae)
111 However, like RDR6, SDE5 is not involved in inverted repeat-induced transgene silencing or the bioge
115 wn to be several times slower in the plastid inverted repeat (IR) compared with single-copy (SC) regi
116 wo genes (clpP, rpoC1), and expansion of the inverted repeat (IR) into both large and small single-co
117 A specific RhpR-binding site containing the inverted repeat (IR) motif GTATC-N6-GATAC, was mapped to
118 The total genome size is 162,321 bp, with an inverted repeat (IR) of 27,273 bp, large single-copy (LS
119 the identity of the MerR binding site as an inverted repeat (IR) sequence overlapping the transcript
122 a long noncoding RNA (lncRNA) containing an inverted repeat (IR) with >80% identity to W1-COE The Iw
124 structing an effector gene that expresses an inverted-repeat (IR) RNA derived from the premembrane pr
125 RNA interference suppression of this gene in inverted-repeat (ir)JAZh plants deregulated a specific b
127 eletion mutants, we found that the number of inverted repeats (IRs) flanking the promoter is variable
128 enetic instability at palindromes and spaced inverted repeats (IRs) leads to chromosome rearrangement
129 ,528 bp in length, composed with one pair of inverted repeats (IRs) of 26,819 bp, which were separate
133 s suggests that the reported large excess of inverted repeats is due to repeats found in intergenic r
135 n many chloroplast genomes, the inference of inverted repeats is needed in chloroplast phylogeny anal
136 ncatula is a legume species belonging to the inverted repeat lacking clade (IRLC) with trifoliolate c
141 er, in a large subclade of the Fabaceae, the inverted repeat-lacking clade (IRLC), of which pea is a
143 nce analysis, we have now identified a 77-bp inverted repeat located upstream (206 bp) of the start c
144 BirA has been reported to bind an imperfect inverted repeat located upstream of the biotin synthesis
146 nding sites reveals that the tetranucleotide inverted repeats long believed to be important for C-pro
149 ing Z-DNA motifs, quadruplex-forming motifs, inverted repeats, mirror repeats and direct repeats and
150 uding Z-DNA, G-quadruplex, A-phased repeats, inverted repeats, mirror repeats, direct repeats and the
151 co-transport proteins that use a five-helix inverted repeat motif have recently emerged as one of th
155 nsable for GC-induced evolutionary conserved inverted repeated negative GC response element (IR nGRE)
156 lusive for GC-induced evolutionary conserved inverted repeated negative GC response element (IR nGRE)
160 afQ-(DinJ)2-YafQ or a DinJ dimer at a single inverted repeat of its recognition sequence that overlap
161 the central axis of the channel, without the inverted repeat of mammalian-type urea transporters.
162 nation, a mutagenesis cassette containing an inverted repeat of selection marker(s) is integrated int
163 presence of the known CmeR-binding site, an inverted repeat of TGTAAT, in the promoter region of Cj0
166 cp genome size is 151,173 bp with a pair of inverted repeats of 27,093 bp separated by small and lar
167 facing conformation with a core structure of inverted repeats of 5 TM helices (TM2 to TM6 and TM7 to
170 or a 19-bp motif located within the terminal-inverted repeats of Hsmar1 transposons and their derivat
171 inear elements, at least one of the terminal inverted repeats of pBSSB1 is non-essential, but that a
173 es and binds to a DNA sequence consisting of inverted repeats of the pentameric sequence nGAAn, known
174 s been reported for ectopic HR events (e.g., inverted repeats or between plasmids), Rad51 has been th
175 enic lines containing short gene segments in inverted repeat orientation designed to reduce expressio
176 ntly formed by intrachromosomal NAHR between inverted repeat pairs comprising one amplicon on Yp and
177 dominance of GC nucleotides, and presence of inverted repeats (Pr-nucleotides) at processed coding en
178 revealed the presence of AT-rich direct and inverted repeats previously reported to function as DegU
183 s that enable insertion of transgenes in the inverted repeat region of the plastome between the trnV
184 w that these two genes, as well as the 77-bp inverted repeat region, are cotranscribed with the capsu
185 Partly because of independent losses of one inverted repeat region, Orobanchaceae plastomes vary 3.5
187 lation levels in the internal and terminated inverted repeat regions of these elements, which might b
189 DSB initiates a pairing interaction between inverted repeats, resulting in the formation of large di
190 pulated genetically to express gene-specific inverted-repeat RNA sequences exhibited significant redu
191 , non-canonical promoters consisting of 9 bp inverted repeats separated from a -10 hexamer by 19 bp.
192 of interest: an RNA/DNA hybrid domain and an inverted repeat sequence capable of forming a stem-loop
193 Ser beta-sheet that binds specifically to an inverted repeat sequence distinct from those recognized
194 sin occurred via binding directly to a short inverted repeat sequence in the intergenic region overla
196 otein in various genetic backgrounds, and an inverted repeat sequence in the promoter of hetP was nec
197 R binds specifically and tightly to an 11-bp inverted repeat sequence in the promoter regions of the
199 tprinting demonstrated binding of CouR to an inverted repeat sequence that overlaps the -10 region of
201 sses a single operon by binding to a perfect inverted repeat sequence, whereas HpNikR binds to promot
204 owed in Saccharomyces cerevisiae that nearby inverted repeat sequences ( approximately 20-200 bp of h
205 n integrate both short oligonucleotides with inverted repeat sequences and a 2.8 kb excised mini-casp
206 taining many copies of the viral genome with inverted repeat sequences at the junctions between monom
207 " class of mutations that arise in imperfect inverted repeat sequences by DNA-strand misalignments du
209 posase binds specifically to ISY100 terminal inverted repeat sequences via an N-terminal DNA-binding
211 unique long (UL) region and a segment of the inverted repeat short (IRS)/unique short (US) region.
212 While some Phantom elements have terminal inverted repeats similar in length and structure to Muta
213 Selected repetitive sequences termed short inverted repeats (SIRs) have the propensity to form seco
215 man miR-29a promoter identified an imperfect inverted repeat spaced by one nucleotide DNA motif, inve
216 of Manduca sexta grew faster when consuming inverted-repeat stable transformants (irAGO8) plants but
219 None of the rearranged sequences showed the inverted repeat structure characteristic of BFB; instead
220 sporters (SLC26Dg and UraA), to have a 7 + 7 inverted repeat structure with anion transport initiated
221 functional relevance of the pseudosymmetric inverted-repeat structures of the antiporter-like subuni
222 o Mutator elements, some display subterminal inverted repeats (sub-TIRs) and others have more complex
223 short ( approximately 30- to 40-nucleotide) inverted repeats, such as Alu elements, are sufficient t
224 nt Repeat Database and searches for flanking inverted repeats suggest that the high incidence of disp
228 forms a tetramer, which tightly binds to an inverted-repeat target sequence overlapping with the pro
229 matin at centromeres I and III is flanked by inverted repeats termed IRCs, which are required for pro
231 s of the complete regulon identified a 15 bp inverted repeat that functions as a high-affinity bindin
233 entifies a previously unknown pair of 5' UTR inverted repeats that act by altering the relative fimA
234 several homonucleotide runs as well as small inverted repeats that are able to form strong secondary
235 parently a foldback transposon with terminal inverted repeats that are much longer and more complex t
236 epeats is general; we found that many nearby inverted repeats that are present in the yeast genome al
238 d by 6-bp target site duplications, terminal-inverted repeats that are several hundred nucleotides lo
239 e DUP-TRP/INV-DUP structures are mediated by inverted repeats that can be separated by >300 kb, a gen
240 ast, the smaller, but significant, excess of inverted repeats that we report in protein coding sequen
241 ztransib has 3518 bp including a 5' terminal inverted repeat (TIR) of 552 bp, a promoter sequence of
242 TEs) are short DNA transposons with terminal inverted repeat (TIR) signals and have been extensively
243 he transposase activities including terminal inverted repeat (TIR) specific DNA-binding activity, DNA
244 ransposase activities, including 5'-terminal inverted repeat (TIR)-specific binding and assembly of a
245 the transposase domain possesses 5'-terminal inverted repeat (TIR)-specific DNA binding, DNA looping,
246 ucleotide duplexes derived from the terminal inverted repeats (TIR) of the A. boonei casposon as well
248 get site duplications and a pair of terminal inverted repeats (TIRs) resembling V(D)J recombination s
249 tion bias toward noncoding regions, terminal inverted repeats (TIRs), target site duplications, and p
250 superfamily, it has unusually long terminal inverted-repeats (TIRs) that resemble those of Foldback
251 t core of 10 TMSs is made of two intertwined inverted repeats (TMS1-5 and TMS6-10) that are followed
252 can also be shortened from the native 50-bp inverted repeat to 26 bp; thus, the Agrobacterium hairpi
255 lineate two pathways that spontaneously fuse inverted repeats to generate unstable chromosomal rearra
257 ow that this T-DNA configuration produces an inverted repeat transcript and that small interfering RN
259 ardtii, sRNAs derived from genome-integrated inverted repeat transgenes, perfectly complementary to t
265 217 insertions of 18 Stowaway-like miniature inverted-repeat transposable element (MITE) families pre
266 discovery of rice strains where a miniature inverted-repeat transposable element (mPing) has amplifi
272 share all the classic features of miniature inverted-repeat transposable elements (MITEs), including
274 genome has features in common with miniature inverted-repeat transposable elements (MITEs): high A +
276 (PEGs), which were associated with miniature inverted-repeat transposable elements, imprinted differe
279 high propensity to execute a U-turn at small inverted repeats (up to 1 in 40 replication events).
282 gions; identified the ISs' possible terminal inverted repeats, usually flanked by direct repeats; and
283 of specific nucleotide sequences, direct and inverted repeats, variable length tandem repeats of subp
288 t DNA is 160,149 bp in size with a 21,822-bp inverted repeat, whereas NIES293 (West Pacific) chloropl
289 acterium liquefaciens comprises a five-helix inverted repeat, which is widespread among secondary tra
290 ment and a 73-bp sequence were identified as inverted repeats, which could explain the possible mecha
291 ding sequences they both detect an excess of inverted repeats, which is much lower than previously re
292 ation repair (PRR) pathway prevent fusion of inverted repeats, while genes in the translesion branch
294 tor sites having more than one 5'-TAC/GTA-3' inverted repeat with implications in vivo for a mechanis
295 ally high GC content, each containing a long inverted repeat with one or two protein-coding genes and
298 footprint data in E. coli generally contains inverted repeats with significantly (p < 0.05) greater p
300 specific, imperfect DNA hairpin formed by an inverted repeat within the upstream essential element (U
WebLSDに未収録の専門用語(用法)は "新規対訳" から投稿できます。