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1 They are considered isogenic.
2 but the rhizobia compared were not otherwise isogenic.
3 diated genome editing, we created a panel of isogenic 22Rv1 prostate cancer cell lines representing a
5 ongoing survival of ABC cells, we developed isogenic ABC cells that differed solely with respect to
9 it a bi-modal body-weight distribution, with isogenic animals randomly emerging as either normal or o
12 , PMN recruitment to wounds infected with an isogenic AT-deficient S. aureus strain was unimpeded, ex
14 the inorganic components of human cells with isogenic backgrounds in distinct states of cellular plur
16 echanisms underlying phenotypic variation in isogenic bacterial populations remain poorly understood.
17 sters are phenotypic variants present within isogenic bacterial populations that exhibit extreme tole
22 in MA high/low drinking mice, as well as in isogenic C57BL/6J mice that varied in their MA preferenc
25 served significantly reduced survival of the isogenic carrier mutant compared to that of the parental
28 ure for oncogenic KRAS derived from a murine isogenic cell line with a coexpression network derived b
29 l function by using genome editing to create isogenic cell lines followed by phenotypic characterizat
30 icacy of LINE-1 replication was increased in isogenic cell lines harboring inactivating mutations in
31 s, we performed a genome-wide RNAi screen in isogenic cell lines harboring wild-type or mutant PIK3CA
32 ively, and selectivities of >11.6 versus the isogenic cell lines transfected with and expressing func
33 more stable in KEAP1(+/+) than in KEAP1(-/-) isogenic cell lines, whereas NRF2 is dramatically stabil
36 led by the GalNAc-T2 isoform both ex vivo in isogenic cell models and in vivo in mouse Galnt2 knockou
41 iency was markedly reduced (to 1-10%) in the isogenic cells deficient in Pol kappa, Pol iota or Pol z
43 I3K signalling by cancer-relevant mutations (isogenic cells expressing an oncomutant PI3Kalpha allele
45 significant phenotypic differentiation among isogenic cells frequently occurs, with the resulting het
47 synthase genes, suggesting that some of the isogenic cells in a population might produce autoinducer
48 The authors demonstrate that the majority of isogenic cells in bacterial populations survive lethal a
49 the PALB2 gene in HEK239 cells, resulting in isogenic cells representing all three genotypes for both
52 conducted the replication experiments in the isogenic cells where individual translesion synthesis (T
54 g and a higher frequency of fork collapse in isogenic cells, explaining their poorer proliferation ra
56 We used whole-genome sequencing of multiple isogenic chicken DT40 cell clones to precisely determine
62 /eod1-2 mutants were already larger than the isogenic Col-0 wild type, but this phenotype was trigger
63 colorectal cancer progression, we used three isogenic colon cancer cell lines that differ only in KRA
64 r, we used precise gene targeting to produce isogenic colon cancer cell lines with a knockout/rescue
66 utations and analyzed two different types of isogenic control and NRXN1 mutant neurons derived from t
68 press a long-acting analogue of GLP-1 or the isogenic control microbe which solely harbored the pNZ44
69 tal tract infection but, unlike a pathogenic isogenic control, is unable to elicit significant chroni
72 ne editing of MECP2(R306C) cells to generate isogenic controls rescued HDAC3-FOXO-mediated impairment
75 (sprayed or unsprayed with Roundup) and the isogenic corn to reassess its substantial equivalence st
76 ssessed as 'substantially equivalent' to its isogenic counterpart by a nutrient composition analysis
77 metabolome differences between NK603 and its isogenic counterpart consisted of an increase in polyami
79 mall RNAs of cells and matched exosomes from isogenic CRC cell lines differing only in KRAS status.
88 eriments involving inoculation of individual isogenic derivatives of NTHi strain 12, the parent strai
89 rt G1 phases load MCM much faster than their isogenic differentiated counterparts with long G1 phases
91 y of this improved approach, we generated an isogenic distribution of heteroplasmic cells with variab
93 atin interactions, we established stable and isogenic Drosophila epilines that carry alternative epia
96 are genome-wide methylation patterns between isogenic ESC and EGC lines to define epigenetic similari
97 Z in A/E pathogen virulence, we generated an isogenic espZ deletion strain (DeltaespZ) and correspond
99 in naturally aneuploid isolates compared to isogenic euploid controls and found that 10-30% of ampli
101 fluorescent protein (GFP)-expressing PAO1 or isogenic exsA mutants for 6 h ex vivo before bacterial t
102 A-seq) analysis of a wild-type strain and an isogenic fabT deletion mutant strain found that between
103 se FANCD2-dependent mechanisms, we generated isogenic FANCI-, FANCD2- and FANCI:FANCD2 double-null ce
104 ts in the linear sorting of a set of diverse isogenic female lines, unambiguously demonstrating the h
105 and virulence characteristics, and produced isogenic gene deletion mutants of important CA-MRSA viru
106 gnition and chemotropic interactions between isogenic germlings requires oscillation of the mitogen-a
112 nstructed and characterized a large panel of isogenic H. pylori strains that differ primarily in the
113 resonance imaging also demonstrated that the isogenic H201R strain was significantly more virulent in
116 of a proof-of-principle platform, which uses isogenic hESCs for functional evaluation of GWAS-identif
118 DM shared transcriptomic profiles with their isogenic HMDM counterparts while also revealing novel ma
121 s, response, and action in parental and near-isogenic Htg9.1 genotypes strongly implicate LsERF1 as t
123 oliferation and survival, we generated three isogenic human colorectal carcinoma cell line models in
125 ar disease-associated mutations and in three isogenic human heart tissue and hiPSC-CM pairs showed gr
126 ong-QT syndrome and also supports the use of isogenic human induced pluripotent stem cell-derived car
128 roRNAs (miRNAs) in neurogenesis, we employed isogenic human RTT patient-derived induced pluripotent s
129 into oxidized chromatin we have established 'isogenic' human diploid cells in which PARP1 and/or PARP
133 enesis of SNCA in these cells, generating an isogenic iPSC line with normalized SNCA gene dosage.
134 report comparative genomic analysis of nine isogenic iPSC lines generated using three reprogramming
135 301L mutation and generated P301L:Deltap35KI isogenic iPSC lines using CRISPR/Cas9 genome editing.
136 enic propensity influences the commitment of isogenic iPSCs and a specifically isolated pool of mesod
138 found that differentiated cells derived from isogenic iPSCs and nt-ESCs showed comparable lineage gen
144 quantitative phosphoproteomic analysis using isogenic knockin cell lines containing 'driver' oncogeni
145 ypic clonal screening strategies to generate isogenic knockouts and knock-ins highly efficiently, wit
146 reater extent versus other MEK inhibitors in isogenic KRAS HCT116 and mutant KRAS SW620 colon cancer
148 evelop a synthetic lethal chemical screen in isogenic KRAS-mutant and wild-type cells to identify cli
150 TD2 mutations on chemotherapy sensitivity in isogenic leukemia cell lines and in murine leukemia gene
152 Four Arabidopsis (Arabidopsis thaliana) near isogenic lines (NILs) differing in g were grown at ambie
154 s, genome-wide association studies, and near-isogenic lines enabled the identification of terpene syn
156 arrying the Tau P301L mutation and generated isogenic lines in which p35 is replaced with noncleavabl
158 tance assays, using ZmTps21 and Zmtps21 near-isogenic lines, further support the endogenous antifunga
161 comparison between heat-stressed LVS and the isogenic Lon-deficient mutant identified 29 putative Lon
166 SRSF2 in K562 leukemia cells, generating an isogenic model so that splicing alterations can be attri
168 -type were significantly higher than that of isogenic modH5 OFF or DeltamodH5 mutants, indicating tha
170 ductions in leukemic burden, specifically in isogenic mouse leukemias and patient-derived xenograft A
175 esentative epidemic M1 strain and a panel of isogenic mutant derivative strains, we evaluated the rel
176 rulence of a clinical ExPEC isolate with its isogenic mutant impaired for the production of colibacti
177 ngeles County clone (LAC) wild-type with the isogenic mutant LACpsmalpha, which lacks the psmalpha op
179 tatively determined using both wild-type and isogenic mutant Pseudomonas strains with different EPS-s
180 Compared to the wild-type strain, a H201R isogenic mutant strain caused significantly larger skin
183 ture of H. pylori strain 7.13 or its pgdA(-) isogenic mutant with AGS gastric epithelial cells or HEK
185 ld-type strains and their corresponding CdtB isogenic mutants and by delivering CdtB directly into th
187 sures, Alab49DeltafbaA was compared to other isogenic mutants lacking virulence genes known to be dis
192 wild-type strain was used in this study, and isogenic mutants were constructed with deletions in the
194 Using endocytosis inhibitors, bacterial isogenic mutants, and neutralizing antibodies against ho
197 whole genome library that was delivered into isogenic neuroblastoma cell lines expressing or not expr
198 or intravenous injection with cryopreserved, isogenic NF54 P. falciparum sporozoites (PfSPZ) generate
199 N2-fixing symbionts progressively outcompete isogenic non-fixers within root nodules, where N2-fixati
202 eripheral blood mononuclear cells, while its isogenic nonmotile mutant lacking PF resulted in signifi
203 ral characteristics of the OPS moieties from isogenic nonmucoid strain 4095a and mucoid strain 4095c
205 zymes in the resistance to TKIs, we used the isogenic NSCLC H1650 cell line and its erlotinib-resista
206 rent EGFR/KRAS mutational status and that of isogenic NSCLC lines expressing wild-type or mutant EGFR
207 (iPSC-CMs and iPSC-ECs) were more similar to isogenic nt-ESC counterparts than those derived from IVF
212 e-wide loss-of-function genetic screen in an isogenic pair of human colorectal cancer cell lines harb
213 enetic screen to determine the phenotypes of isogenic pairs of clear cell renal cancer cells (ccRCC),
214 histone modifications genome-wide across an isogenic panel of mouse embryonic stem cell (ESC) and ne
215 ignificantly attenuated in comparison to the isogenic parental strain, TX82, in a mixed-inoculum UTI
219 alysis and heat map data correctly clustered isogenic phenotypes, highlighting the potential for hund
225 a number of cells randomly selected from an isogenic population at a given time and condition, to ra
230 signaling variability, both across cells in isogenic populations and within individual cells over ti
231 bacteria to humans, individual cells within isogenic populations can show significant variation in s
232 natural populations to those made using near-isogenic populations derived from crosses between parent
234 Finally, analysis of daughter-cell pairs and isogenic populations indicates that the dynamics of the
235 RhoA controls cell-to-cell heterogeneity in isogenic populations of cells in vitro and epithelial mo
236 n addition, a fraction of individuals within isogenic populations raised in controlled environments h
237 able to transfer their amoeboid phenotype to isogenic primary cancer cells through exosomes, and that
239 cld was essential for chlorate reduction in isogenic pure culture experiments, but showed only minor
240 m four cytoreductive nephrectomies and SETD2 isogenic renal cell carcinoma (RCC) cell lines using chr
241 We show that this activity is triggered in isogenic renal cells upon their transformation independe
246 sed compared to that in cells exposed to the isogenic S. aureus wild-type strain, indicating that PSM
247 ructed an S. Typhi fliC mutant and otherwise isogenic S. Typhi strains expressing the Hj, Hd, Hz66 fl
249 ique, treatment induced mutations in sets of isogenic samples with very low false positive rates.
254 timated differential gene expression between isogenic seedlings whose parents had, or had not, been s
256 e interplay between SP-A and a collection of isogenic sequential isolates from 7 patients with CF.
257 enic stimulation of mTORC1 signaling in this isogenic setting or a panel of eight breast cancer cell
258 n, we used Zinc finger nucleases to generate isogenic SHANK3 knockout human embryonic stem (ES) cell
259 usly inoculated mice were challenged with an isogenic SpA-deficient S. aureus mutant, cells prolifera
260 nts of CORRECT to generate scarlessly edited isogenic stem cell lines with intended monoallelic and b
261 ed a high fat/sugar water-induced animal (an isogenic strain of C57BL/6 J:129S1/SvImJ mice) model of
262 A/J lacking T and NK cells), and SK(-/-) (an isogenic strain of strain C57BL6/J lacking SK1), to inve
263 L6/J (both immunocompetent), Tgepsilon26 (an isogenic strain of strain CBA/J lacking T and NK cells),
268 oach was applied to Tn-Seq libraries made in isogenic strains of Mycobacterium tuberculosis lacking t
269 Fluorescent protein-based differentiation of isogenic strains revealed that priority of gut colonizat
273 s, thus highlighting the importance of using isogenic strains to study the role of CagA toxin polymor
275 enome editing mediated by TALENs to generate isogenic subject-specific mutant and gene-corrected iPSC
280 produced a genome-wide collection of 15,000 isogenic targeting vectors for conditional mutagenesis i
281 ue for assaying large libraries of otherwise isogenic transposon mutants providing insight into gene
282 used with HDR donors in hESCs to generate an isogenic TS cell line in a scarless manner and to model
283 uces significant tumor control in aggressive isogenic tumor models via a concerted innate and adaptiv
287 mbryonic fibroblasts (MEFs) compared with an isogenic virus encoding mitochondrial PB2, in a MAVS-ind
288 y observed in culture, providing potentially isogenic virus-free lines enabling studies probing the b
289 show that crossing these altered plants with isogenic wild type produces epi-lines with heritable, en
291 logs) in the bclA1(-) mutant compared to the isogenic wild-type control, but that levels of toxins (A
292 o increase expression of NDRG1 compared with isogenic wild-type controls and TP53 R248W knockin cells
293 sceptibility to VEEV-induced cell death than isogenic wild-type MEFs, indicating that EGR1 modulates
294 es showed altered expression compared to the isogenic wild-type strain and included transcriptional r
296 In this study we used FMR1 knockout and isogenic wildtype mice to systematically map the distrib
298 TXBP1 loss-of-function mutations and studied isogenic WT and STXBP1-mutant human neurons derived from
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