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1 crodilution method, we found that the serial isolates of 11% of the patients infected with strains of
4 nstructed a deletion of 530 bps in a primate isolate of A. actinomycetemcomitans, which produced leuk
5 her the laboratory Neff strain or a clinical isolate of A. castellaniiIn vitro real-time imaging demo
6 lis were fertile when paired with the MAT1-1 isolate of A. felis but not with any of the other specie
9 omes of three toxigenic and three atoxigenic isolates of A. flavus in aflatoxin conducive and non-con
10 o biologically incompatible, with the MAT1-2 isolates of A. parafelis and A. pseudofelis being the ex
13 coincubated with trophozoites of a clinical isolate of Acanthamoeba (genotype T4) or stimulated with
14 er, macrophages cocultured with the clinical isolate of Acanthamoeba produced significantly less IL-1
15 have the greatest overall inhibition for all isolates of Acanthamoeba castellanii and Acanthamoeba po
16 was assessed for 206 clinically significant isolates of aerobic Gram-positive bacilli representing 2
17 ere, we examined resistance of P. falciparum isolates of African origin (NF54, NF165 and NF166) to TE
19 possible to produce HCV particles resembling isolates of all HCV genotypes in human hepatoma cells (H
20 ly inhibits cellular entry of representative isolates of all known ebolavirus species in vitro and sh
25 effect against multi-drug resistant clinical isolates of bacterial pathogens and include three novel
29 bjectives of this study were to characterize isolates of bovine milk origin from a collection that ha
34 rmed a plasmid-free lymphogranuloma venereum isolate of C. trachomatis, serovar L2, with either the o
36 inst numerous fluconazole-resistant clinical isolates of C. albicans and non-albicans species, and it
45 examining over 800,000 DNA variants in wild isolates of Caenorhabditis elegans, we made a discovery
47 6 Cryptococcus neoformans strains), and 746 isolates of Candida species (702 isolates, 13 species) a
49 isolates of Enterobacteriaceae, including 25 isolates of carbapenem-resistant Enterobacteriaceae.
52 chloropsis oceanica CCAP 849/10 and a marine isolate of Chlorella vulgaris CCAP 211/21A as the best l
53 e, convallatoxin was able to inhibit primary isolates of CMV, including those resistant to the anti-C
55 ed against the commercially used Mexican (M) isolate of CpGV, infection experiments of larvae of the
57 d intravenously with a low-passage, clinical isolate of DENV-2, and this resulted in sustained viremi
58 nally influences Caenorhabditis elegans wild isolates of distinct mtDNA lineages and geographic origi
61 We also sequenced the complete genome of an isolate of DWV that covertly infects the AmE-711 cell li
62 y in which a heterogeneous collection of 196 isolates of E. coli and K. pneumoniae (PRIMERS II) were
63 te quantification of both stock and clinical isolates of E. coli in spiked blood within a broad range
64 ion, and virulence of oropharyngeal and lung isolates of E. coli, suggesting that cranberry proanthoc
65 Two VMEs were observed for daptomycin in isolates of E. faecalis and 2 ME, 1 for high-level genta
66 he molecular origin of the outbreak using 22 isolates of E. rostratum retrieved from 19 case patients
68 he same mutation is also found in most human isolates of emergent avian H7N9 and H10N8 viruses whose
70 atories' perspective on why having access to isolates of enteric pathogens is essential for public he
75 nd accounted for 1.4% (1,493/103,960) of all isolates of Enterobacteriaceae The most frequently ident
77 ed by CLSI broth microdilution (BMD) for 255 isolates of Enterobacteriaceae, including 25 isolates of
78 accumulation of mobile elements in hospital isolates of enterococci can include those that are inher
80 picture of natural enterococci diversity, 11 isolates of Enterococcus faecalis recovered from freshwa
81 against beta-lactams in 72 highly resistant isolates of Escherichia coli and Klebsiella pneumoniae (
82 t OmpC proteins from four different clinical isolates of Escherichia coli obtained sequentially from
83 ctivity against multidrug-resistant clinical isolates of Escherichia coli, Acinetobacter baumannii, K
84 activity in vitro, including recent clinical isolates of Escherichia coli, Enterococcus faecalis, Kle
85 ates (MIC, >/=1 mug/ml; n = 3,428) and 9,371 isolates of Escherichia coli, Klebsiella pneumoniae, Kle
86 trations (MICs) of imipenem against clinical isolates of Eschericia coli and Klebsiella pneumoniae ha
87 Oral gavage of BALB/c mice with a clinical isolate of extraintestinal pathogenic E. coli (ExPEC) le
88 novo assembly of 312 blood- or urine-derived isolates of extraintestinal pathogenic (ExPEC) Escherich
90 h-throughput sequencing of the RNAs from 275 isolates of five fungal plant pathogens, 66 previously u
91 crotiter trays on caspofungin MICs using 209 isolates of four Candida species, including 16 C. albica
92 ribotype 027 clinical isolates and clinical isolates of four other ribotypes (001, 002, 014, and 053
93 reak was caused by genotype II, although two isolates of genotype I were also detected for the first
94 omplete genomic sequences of recent virulent isolates of genotypes II and IX from China, Egypt, and I
97 ssment of prevalence of MCRPE infection from isolates of Gram-negative bacteria collected at the hosp
98 model) to predict the potential virulence of isolates of H. parasuis based on a subset of 10 genes fr
99 new diagnostic mPCR was tested on 143 field isolates of H. parasuis that had previously been whole-g
100 y protective vaccine against nonencapsulated isolates of Haemophilus influenzae (NTHi) lies in the ge
101 e-orchestrated inflammation using a clinical isolate of HCMV (TR) and macrophages derived from primar
106 Overall, these data indicate that a recent isolate of HFMG is greatly attenuated in the chicken hos
107 ver, in contrast to other avian IAVs, recent isolates of highly pathogenic H5N1 influenza viruses had
109 susceptibility patterns of multiple clinical isolates of Histoplasma representing different phylogene
110 osylation is one of the reasons that primary isolates of HIV and SIV are so heavily resistant to anti
111 t it was recently observed that most primary isolates of HIV-1 can mediate HLA-C downmodulation.
114 ed the susceptibilities of different primary isolates of HIV-1 to the inhibition of viral infectivity
116 ur data indicate that we have detected a new isolate of HPV38 that appears to be integrated into the
117 that one patient was infected with this new isolate of HPV38, which was integrated into his/her geno
120 binant trimers based on the env genes of two isolates of human immunodeficiency virus type 1 (HIV-1),
122 al expansion to include a number of clinical isolates of important Gram-negative species-Enterobacter
126 olar efficacy against several human clinical isolates of influenza A viruses, including both oseltami
127 s rapidly accumulated in respective clinical isolates of interest including MDROs such as methicillin
129 irst ten carbapenem non-susceptible clinical isolates of K pneumoniae or E coli and ten susceptible s
130 targeting Gram-negative bacteria on clinical isolates of Klebsiella pneumoniae, containing highly-res
131 ikely to be XDR, or (iii) is identical to an isolate of known resistance (i.e., a likely transmission
132 aluated using DNA extracted from 91 clinical isolates of known geographic subspecies, while the assay
134 (i) raw reads from genomes of 308 Salmonella isolates of known serotype; (ii) raw reads from genomes
137 o the mechanisms by which resistant clinical isolates of L. donovani induce intracellular events rele
138 genetic analyses indicate that environmental isolates of L. pneumophila have a potential positive sel
139 rophages infected with 3 ATCC and 5 clinical isolates of L.V. guyanensis, and L.V. panamensis for 24
142 l SidE orthologs encoded by the Philadelphia isolate of Legionella pneumophila were toxic to yeast, a
146 ates of M. abscessus subsp. abscessus and 12 isolates of M. abscessus subsp. massiliense were 8 mug/m
147 nd that PRELP binds the majority of clinical isolates of M. catarrhalis (n = 49) through interaction
150 ast, the absence of a detectable erm gene in isolates of M. chelonae, M. senegalense, and M. peregrin
152 enome comparison of pretreatment and relapse isolates of M. intracellulare uncovered mutations in a p
155 emergence of drug resistance among clinical isolates of M. tuberculosis, we show that the ancestral
160 s in all bloodstream infections and clinical isolates of methicillin-resistant Staphylococcus aureus
161 as a drug of last resort; however, clinical isolates of methicillin-resistant Staphylococcus aureus
163 a, Staphylococcus aureus (including clinical isolates of MRSA and MSSA) and Staphylococcus epidermidi
165 were able to clearly distinguish a clinical isolate of MTB from a nonTB species of the genus Mycobac
166 f 224 temporal and spatial diverse S. aureus isolates of multilocus sequence type (ST) 8 to reconstru
170 drug susceptibility testing on 337 clinical isolates of Mycobacterium tuberculosis collected in KwaZ
172 ipids synthesized by clinical drug-resistant isolates of Mycobacterium tuberculosis reactivate HIV-1
173 strains with mutations in gatA from clinical isolates of Mycobacterium tuberculosis show increased mi
174 selected mutations found in Australian field isolates of MYXV that fall in known or potential virulen
177 One hundred fifteen clinical and laboratory isolates of N. gonorrhoeae were tested following the Cli
179 rude whole-genome assemblies, we analyzed 25 isolates of Neisseria gonorrhoeae by using a high-resolu
181 d ofloxacin were determined for 100 clinical isolates of nontyphi Salmonella with or without resistan
182 ralia and New Zealand, the unique population isolate of Norfolk Island has been shown to exhibit incr
183 here that, in the guinea pig model, a human isolate of novel H7N9 influenza virus, A/Anhui/1/2013 (A
184 enerated high-quality draft genomes from 265 isolates of NVT pneumococci not susceptible to penicilli
186 ement and orientation of an invasive corneal isolate of P. aeruginosa in the corneal stroma during in
187 l isolates and approximately 50% of clinical isolates of P. aeruginosa from chronic airway infection
188 Both laboratory standard strains and CF isolates of P. aeruginosa induce DNA, MPO, and HNE relea
189 Determination of exoU expression in clinical isolates of P. aeruginosa may be helpful in directing cl
190 s showed increased activity against clinical isolates of P. aeruginosa, further confirming the target
191 throcytes were refractory to invasion by all isolates of P. falciparum because parasites failed to at
193 eport the sequence variation of 16 different isolates of parainfluenza virus 5 (PIV5) that were isola
197 releases a diverse array of metabolites, and isolates of physically associated taxa use unique subset
199 in RSV G and PIV5 L were found in individual isolates of PIV5-RSV-G (HN-L), but plaque isolates of PI
200 e drug responses of K13 wild-type and mutant isolates of Plasmodium falciparum sourced from a region
201 peptides may explain why nearly all clinical isolates of pneumococci conserve this enzyme despite the
202 rogenic acids (CHAs) from green coffee, with isolates of proteins from egg white (EWP), whey (WPC) an
203 evealed that genetic divergence among Hainan isolates of PRSV has allowed the virus to overcome the C
204 er antimicrobial performance against two MDR isolates of Pseudomonas aeruginosa and Acinetobacter bau
206 We identified here melanogenic clinical isolates of Pseudomonas aeruginosa with large chromosoma
207 ) reference broth microdilution (BMD) for 99 isolates of Pseudomonas aeruginosa, 26 Acinetobacter bau
208 resistance against a broad spectrum of field isolates of Puccinia graminis f.sp. tritici, including t
209 rus infection and that the M protein of wild isolates of rabies virus is a viral immune-modulatory fa
211 All seven media were challenged with 147 isolates of rapidly growing mycobacteria and 185 isolate
212 microdilution, susceptibility testing of 170 isolates of rapidly growing mycobacteria showed equivale
216 pin, gentamicin, and doxycycline against 101 isolates of Rhodococcus equi were determined by broth ma
219 natants from laboratory strains and clinical isolates of S. aureus caused galectin-3 degradation.
220 of nonsynonymous SNPs in fnbA among clinical isolates of S. aureus that cause endovascular infections
221 a collection of genetically diverse clinical isolates of S. aureus, community-associated methicillin-
223 By whole-genome sequence analysis of 675 isolates of S. Enteritidis from 45 countries, we show th
225 Here, we used whole-genome sequencing of 140 isolates of S. pneumoniae recovered from bloodstream inf
226 onmental survival of clinical and laboratory isolates of S. pyogenes and S. pneumoniae as both organi
227 ary to this view, we found that many natural isolates of Saccharomyces cerevisiae display short or no
229 genomes of pre- and posttherapy MDR clinical isolates of Salmonella Typhimurium from a patient that f
230 termine the species diversity of 23 clinical isolates of Schizophyllum from the United States using m
231 ain samples, in which ovine BSE and distinct isolates of scrapie are mixed at various ratios ranging
232 enome sequencing (WGS) was carried out on 87 isolates of sequence type 111 (ST-111) of Pseudomonas ae
233 o variants shared the same serotype, the SC2 isolates of sequence type 14 (ST14) harbored intact SPI-
235 ollected and whole-genome sequenced clinical isolates of Shigella flexneri serotype 3a from high-risk
239 sequencing was used to compare longitudinal isolates of Staphylococcus aureus that developed resista
240 United States were invited to submit ocular isolates of Staphylococcus aureus, coagulase-negative st
241 ctivity against multidrug-resistant clinical isolates of staphylococcus aureus, including methicillin
242 ctam resistance in human and animal clinical isolates of Staphylococcus intermedius group, Staphyloco
244 nce typing was successfully completed on 494 isolates of Streptococcus uberis from clinical mastitis
245 at were significantly more prevalent in EPEC isolates of symptomatic and lethal outcomes than in EPEC
246 yzing the full genomic sequences of over 100 isolates of Synechococcus-infecting cyanophages collecte
249 ant mutations (17.1%) was obtained among the isolates of TB patients suspected of having MDR-TB.
251 quencing data from 10 global isolates and an isolate of the closely-related Schistosoma rodhaini, whi
252 se finches-Virginia 1994 (VA1994), the index isolate of the epidemic, and Virginia 2013 (VA2013), a r
253 hat Pelagibacterales sp. strain HTCC7211, an isolate of the SAR11 clade of marine alpha-proteobacteri
254 rameshift mutation in pgp1 of our laboratory isolate of the straight genome sequenced variant of 1116
255 ex subjects, 182 (55%) were infected with an isolate of the USA300 methicillin-resistant S. aureus (M
256 BMD) assays were performed on 90 bloodstream isolates of the 4 most common gram-negative bacteria cau
257 the viral envelope (E) protein, whereas many isolates of the African lineage virus lack this site.
258 lso protects against infection with multiple isolates of the closely related organism and causative a
263 nce results were also obtained with clinical isolates of the four DENV serotypes verified by RT-PCR a
265 discovery in 1989, efforts to grow clinical isolates of the hepatitis C virus (HCV) in cell culture
269 nd micafungin were assessed for 290 clinical isolates of the most representative pathogenic molds (15
270 -coverage whole-genome sequencing of 37 wild isolates of the nematode C. briggsae and applied a pairw
271 is consistent across clinical and laboratory isolates of the North American type 1 and type 2 phyloge
272 co-cultured a diverse collection of natural isolates of the opportunistic pathogen Pseudomonas aerug
273 n as well as decreased resistance to several isolates of the plant pathogen Hyaloperonospora arabidop
277 observed for whole water samples than for OM isolates of the same water, suggesting differential reco
278 thicillin resistance in 115 human and animal isolates of the Staphylococcus intermedius group (SIG),
279 seq and full genome sequences for 85 diverse isolates of the yeast Saccharomyces cerevisiae-including
280 at are not observed for M3 or M18 GAS due to isolates of these serotypes naturally harboring mutant r
283 ed a collection of archived human and animal isolates of these three species by deep-sequencing polym
284 the antibiotic susceptibility of subgingival isolates of these two bacterial species, this study dete
286 nome sequencing (WGS) was performed for each isolate of this collection, and discriminating molecular
288 n Rhodococcus equi, pVAPN, carried by bovine isolates of this facultative intracellular pathogenic ac
289 oDetection phylogenetic tree showed that all isolates of this outbreak cluster were strongly related,
291 coinfection of naive African buffaloes with isolates of three SAT serotypes from field buffaloes, pa
294 f synthetic peptide BF2 against the clinical isolates of vancomycin-resistant and control strains of
295 of which 6 neutralized heterologous primary isolates of various HIV-1 subtypes in a standardized in
296 lates and comparing them with a set of CC398 isolates of various known origin might provide clues to
297 all, these data suggest that C. elegans wild isolates of varying geographic origins may adapt to envi
298 ecombination patterns were evaluated for 229 isolates of Wheat dwarf virus (WDV), which are important
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