ライフサイエンスコーパス: knowledgebase

1 ine databases (repositories, registries, and knowledgebases).

2 were identified for use as the basis of our knowledgebase.

3 e analyzed from the articles within the PBPK knowledgebase.

4 generated is available through the GRASSIUS knowledgebase.

5 signed to enable intuitive access to the IDG knowledgebase.

6 ly and accurately annotated protein sequence knowledgebase.

7 mputational chemistry tools and a biological knowledgebase.

8 e Department of Energy (DOE) Systems Biology Knowledgebase.

9 from the Online Mendelian Inheritance in Man knowledgebase.

10 gene names to protein entries in the UniProt Knowledgebase.

11 my portal to the SWISS-PROT protein sequence knowledgebase.

12 allenge for the maintenance of comprehensive knowledgebases.

13 tegy for large, complex and rapidly changing knowledgebases.

14 flexible platforms for the implementation of knowledgebases.

15 MGD strives to provide a comprehensive knowledgebase about the mouse with experiments and data

16 sources consists of an integrated biological knowledgebase and analytic tools aimed at systematically

17 oinformatics Resources consists of the DAVID Knowledgebase and five integrated, web-based functional

18 red by data mining of the PubMed and UniProt knowledgebase, and served as a training set to predict u

19 d proteins to protein entries in the UniProt Knowledgebase based on PubMed ID and/or protein name.

20 of C. vulgaris, iCZ946, thus increasing our knowledgebase by 10% for this model green alga.

21 ed; and most importantly, CTD acts as both a knowledgebase (by reporting data) and a discovery tool (

22 111 species) available in UniProtKB (UniProt KnowledgeBase) by January 2013.

23 hat models of chemical analogues in the PBPK knowledgebase can guide the construction of PBPK models

24 ng this nomenclature, we created a cell line knowledgebase (CLKB) with a well-structured collection o

25 We created Cardiac Organellar Protein Atlas Knowledgebase (COPaKB; www.HeartProteome.org), a central

26 environment supplemented with semi-automatic knowledgebase creation.

27 PhosphoSitePlus((R)) (PSP), a knowledgebase dedicated to mammalian post-translational

28 We argue for an integrated T2D knowledgebase, designed for a worldwide community to acc

29 available, multidisciplinary, cancer-focused knowledgebase developed to support cancer translational

30 ical considerations in trial design, genomic knowledgebase development, and patient matching and enro

31 of protein sequence features in the UniProt Knowledgebase, experimental proteomics and variation pub

32 ublicly accessible web-based application and knowledgebase featuring 65 228 distinct molecular associ

33 ed targets are significantly enriched in the Knowledgebase for Addiction Related Genes (ARG) database

34 To create a knowledgebase for plant pathway analysis, we collected 1

35 anSAR is a public integrative cancer-focused knowledgebase for the support of cancer translational re

36 The updated reconstruction will serve as a knowledgebase for understanding and engineering Geobacte

37 ChimerKB represents a knowledgebase including 1066 fusion genes with manual cu

38 BL Nucleotide Sequence Database, the UniProt Knowledgebase, InterPro, CluSTr, GOA and HOGENOM.

39 The knowledgebase is fully searchable via the web using seve

40 The purpose of the BESC Knowledgebase is to serve as a centralized repository fo

41 For the validation study with UniProt Knowledgebase (KB), we present a thorough analysis of th

42 plemented as part of the DOE Systems Biology Knowledgebase (KBase) and are publicly available via API

43 The expanded DAVID Knowledgebase now integrates almost all major and well-k

44 ChEpiMod is a free knowledgebase of chemical modulators with documented mod

45 croarray gene expression studies to create a knowledgebase of gene expression in human cardiac tissue

46 is a comprehensive, authoritative and timely knowledgebase of human genes and genetic disorders compi

47 nline Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and phenotypes, was origina

48 eactome is an expert-authored, peer-reviewed knowledgebase of human reactions and pathways that funct

49 L. japonicus, and substantially enhanced the knowledgebase of this critical class of peptide hormones

50 TOBFAC is an expandable knowledgebase of tobacco TFs with data currently availab

51 , among others, a description of neXtProt, a knowledgebase on human proteins; a detailed explanation

52 While knowledgebases play an increasingly important role in th

53 This compiled knowledgebase provides a chemical structure-based approa

54 ein Structure Initiative Structural Genomics Knowledgebase (PSI SGKB) has been created to turn the pr

55 The Pseudogene.org knowledgebase serves as a comprehensive repository for p

56 In addition to names, the knowledgebase specifies relationships between cell lines

57 The Sequence Tag Alignment and Consensus Knowledgebase (STACK), a database of human expressed gen

58 Biological knowledgebases, such as UniProtKB/Swiss-Prot, constitute

59 abases provide representative subsets of the knowledgebase suitable for efficient searching.

60 tronic and manual annotations to the UniProt Knowledgebase (Swiss-Prot, TrEMBL and PIR-PSD) using the

61 this, we describe EV-TRACK, a crowdsourcing knowledgebase that centralizes EV biology and methodolog

62 We have developed a public knowledgebase that enables data-driven access to the col

63 MetRxn is a knowledgebase that includes standardized metabolite and

64 We foresee the development of an algal knowledgebase that integrates ecosystem-wide omics data

65 We develop OKCAM, a CAM knowledgebase that provides ready access to these data a

66 erent uses, the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the Un

67 erent uses: the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the Un

68 erent uses: the UniProt Archive, the UniProt Knowledgebase, the UniProt Reference Clusters and the Un

69 ses of the Protein Data Bank and the Uniprot Knowledgebase; this core is complemented by entries buil

70 ting the responsibility for maintenance of a knowledgebase to a community of subject matter experts i

71 es have united to form the Universal Protein Knowledgebase (UniProt) consortium.

72 integrated across experiments using UniProt Knowledgebase (UniProtKB) accession numbers.

73 clustered sets of sequences from the UniProt Knowledgebase (UniProtKB) and selected UniProt Archive r

74 We use the UniProt Knowledgebase (UniProtKB) as a case study to demonstrate

75 maintained sequence coverage of the UniProt Knowledgebase (UniProtKB) at nearly 80%, despite a 50% i

76 notation of protein sequences in the UniProt Knowledgebase (UniProtKB) by comparing their domain arch

77 ions) of Gene Ontology (GO) terms to UniProt Knowledgebase (UniProtKB) entries.

78 Programmatic access to the UniProt Knowledgebase (UniProtKB) is essential for many bioinfor

79 milies and increased coverage of the UniProt Knowledgebase (UniProtKB) to nearly 80%.

80 ment Search Tool (BLAST) against the UniProt Knowledgebase (UniProtKB) to provide an entry point to t

81 rences of a given query peptide from UniProt Knowledgebase (UniProtKB) with isoforms.

82 The UniProt Knowledgebase (UniProtKB), comprising the manually annot

83 (GO) annotations to proteins in the UniProt Knowledgebase (UniProtKB).

84 results with interaction information in the knowledgebase via the CLADIST tool associated with pSTII

85 tion matrix of the 307 chemicals in the PBPK knowledgebase was calculated based on pharmacokinetic-re

86 A PBPK knowledgebase was compiled and developed from existing P

87 CaGE is a Cardiac Gene Expression knowledgebase we have developed to facilitate the analys

88 With this knowledgebase, we applied Gene Set Enrichment Analysis t

89 integrate this information into a Web-based knowledgebase, we have developed the Arabidopsis Gene Re

90 Chemicals in the PBPK knowledgebase were ranked based on their correlation tow

91 of data available in the BiologicalNetworks' knowledgebase, which integrates data from >100 public da

92 s to develop a consolidated cardiac proteome knowledgebase with novel bioinformatics pipeline and Web

93 A knowledgebase with the systematic collection and curatio

94 ly and accurately annotated protein sequence knowledgebase, with extensive cross-references and query

95 ly and accurately annotated protein sequence knowledgebase, with extensive cross-references and query

96 ly and accurately annotated protein sequence knowledgebase, with extensive cross-references and query

97 The Reactome Knowledgebase (www.reactome.org) provides molecular deta