ライフサイエンスコーパス: linkage group

1 h BAC probes containing genes mapped to each linkage group.

2 romosome capping segments at the end of each linkage group.

3 each molecule incorporates a common chemical linkage group.

4 sing two to three microsatellite markers per linkage group.

5 generally localized toward the distal end of linkage groups.

6 s and 2068 BAC-end sequences, assigned to 34 linkage groups.

7 markers that resolve into the expected eight linkage groups.

8 n be stated as marker deletion from a set of linkage groups.

9 ving the terminal markers of nearly finished linkage groups.

10 locks of markers properly across gaps within linkage groups.

11 ation and independent assortment of multiple linkage groups.

12 Chlamydomonas reinhardtii that map to the 17 linkage groups.

13 otal of 418 AFLP markers were assigned to 44 linkage groups.

14 ether with a number of putative X chromosome linkage groups.

15 olds consisting of 573 Mb are anchored on 24 linkage groups.

16 rkers that mapped to 468 unique loci on nine linkage groups.

17 for 25% of the markers, distributed over 20 linkage groups.

18 rosatellites and 36 SNPs were mapped onto 16 linkage groups.

19 e-linked markers have been identified for 19 linkage groups.

20 likely linked to the centromeres of these 6 linkage groups.

21 b-genome) genes were assigned on a09 and b09 linkage groups.

22 d ZW systems segregate simultaneously at two linkage groups.

23 us to build a detailed genetic map with nine linkage groups.

24 kers (259 microsatellites and 72 SNPs) to 29 linkage groups.

25 37 Mb in cumulative physical length, onto 14 linkage groups.

26 LP and 111 SSR markers distributed across 19 linkage groups.

27 were mapped into nine major and three minor linkage groups.

28 lar alleles mapping to the S locus region of linkage group 1 and those mapping to the WG889/CDO920 lo

29 a single gene that maps to the lower arm of linkage group 1.

30 1-like genes, which are tightly clustered on linkage group 1.

31 sequence length polymorphism marker Z7504 on linkage group 10.

32 ic anemia, and positioned the mutant gene on linkage group 11.

33 as another embryonic cluster is localized on linkage group 12.

34 We identified 14 large linkage groups (125.5-836.7 cM) that presumably correspo

35 thologs are clustered in a genomic region on linkage group 14 (LG14).

36 sed to map the mutation to the distal arm of linkage group 15.

37 The zfAHR1 gene maps to linkage group 16 in a region that shares conserved synte

38 ve trait locus for CP activity was mapped to linkage group 16 in a segregating population of A. chine

39 This grapevine gene also co-localizes in linkage group 18 with the confidence interval of a previ

40 A quantitative trait locus is present on linkage group 19 that contributes in a major way to this

41 to neighboring regions of a common Ambystoma linkage group 2 (ALG2).

42 d microsatellite map resolved the very large linkage group 2 (LG 2) of the previous high-density map

43 ntain different linkage map markers, 21 from linkage group 2 (LG-02) and 19 from linkage group 8 (LG-

44 Two common QTL on linkage group 2 were identified in both crosses that had

45 was screened using 22 SSR markers located on linkage group 2 which contains a growth-related QTL regi

46 p, and identified two QTLs for resistance on linkage groups 2 (qDM2.1) and 5 (qDM5.1) that determined

47 omic and disomic regions in the right arm of linkage groups 2 and 5.

48 The most significant QTL was mapped to linkage group 21 and was significant at the genomewide l

49 Our results suggest that a single QTL on linkage group 21 explains almost all the genetic variati

50 map encompassed 2926 loci distributed on ten linkage groups; 2454 of those loci are AFLP products gen

51 cus they define, renamed ogon (ogo), maps to linkage group 25.

52 Overall, we identified 37 linkage groups (2n = 80) from the analysis of 288 micros

53 The zinfandel gene maps to linkage group 3 near the major globin gene locus, strong

54 e mapping to the WG889/CDO920 loci region of linkage group 3 which resulted in significant segregatio

55 We identified 11 microsatellite markers on linkage group 3 which were linked to phenotypic sex.

56 of embryonic and adult genes is localized to linkage group 3, whereas another embryonic cluster is lo

57 iations of sex and red color with markers on linkage group 3.

58 Two common QTL on linkage groups 3 and 6 were identified in both crosses w

59 e have identified microsatellite markers for linkage groups 3, 4, 6, 7, 13, and 20 to within 1.7 cM o

60 microsatellite markers to the centromeres of linkage groups 3, 4, 6, 7, 13, and 20.

61 ugh the lss locus maps to the SUNN region of linkage group 4 and sunn and lss do not complement each

62 rkers spanning 2541.7 cM distributed over 51 linkage groups (40 major groups and 11 small groups with

63 dentified a major QTL for stem height on the linkage group 5, which explained 51% of the phenotypic v

64 is was used to map PtaAGP6 SNPs to a site on linkage group 5.

65 ine two regions of conserved synteny between linkage group 7 and 11q13.

66 previously had been reported that zebrafish linkage group 7 shares conserved synteny with human chro

67 Rf was first isolated to a 1.3-cM region on linkage group 7 that spans the genome's largest cluster

68 o tightly linked nuclear restorer alleles on Linkage Group 7, and that male sterility is associated w

69 proximately 0.6 Mb near the top of zebrafish linkage group 7.

70 21 from linkage group 2 (LG-02) and 19 from linkage group 8 (LG-08).

71 o chromosome 18, and zebrafish fem1c maps to Linkage Group 8.

72 Linkage group 9 (LG 9) SSR markers BNL0625 and BNL2805 h

73 An additional QTL on linkage group 9 (qDM9.1) was detected through simultaneo

74 A WWRH map of the syntenic group composed of linkage groups 9 and 13 was constructed by maximum-likel

75 ning molecular markers mapped across sorghum linkage group A were labeled as probes for fluorescence

76 in linkage group C (sometimes referred to as linkage group A) of sorghum.

77 he introgressed region indicated that 92% of linkage group A09 was of A. cardenasii origin in Tifguar

78 Soybean linkage group A2 (soyA2) and Arabidopsis chromosome I sh

79 DNA sequences from loci that map to soybean linkage groups A2, J, and L.

80 each chromosome is identified by one meiotic linkage group and one or more RH groups.

81 rkers associated with sex mapped to a single linkage group and were heterozygous in the male parent.

82 atifolia are located on a single S. vulgaris linkage group and were probably inherited from a single

83 Markers were mapped to 18 linkage groups and a subset of the markers with a mean i

84 Synteny was found between these linkage groups and all four of the Arabidopsis chromosom

85 s that provide the structure for the genetic linkage groups and allow faithful replication, transcrip

86 c analysis of MGR segregation detected eight linkage groups and allowed the mapping of three pigmenta

87 onsensus genetic map spanning 680 cM with 11 linkage groups and an average marker distance of 0.73 cM

88 reviously unassembled D. simulans contigs to linkage groups and by evaluating the quality of targeted

89 wever, many exceptional cases of incongruent linkage groups and increased marker distances were also

90 genetically map 11 junctions to micronuclear linkage groups and macronuclear coassortment groups.

91 d the ranges of motional frequencies for the linkage groups and pyranose rings are comparable.

92 The markers are dispersed over six RH linkage groups and span 825 cR(5000).

93 ix microsatellite and 73 RAPD markers) in 21 linkage groups and spans over 953.1 cM.

94 The nine linkage groups and the 22 anchored scaffolds from the se

95 for the nonequivalence between the number of linkage groups and the actual haploid chromosome number

96 ly indicated good correspondence between the linkage groups and the four Hessian fly chromosomes.

97 of 83 loci distributed among eight autosomal linkage groups and the X chromosome.

98 ximate the position of the centromere for 20 linkage groups and thus relate linkage arrangements to t

99 he map contains 876 SNPs dispersed across 45 linkage groups and we found only a few instances of inte

100 exploration of genetic diversity along each linkage group, and clarification of macrosynteny between

101 gene-specific SSR markers were mapped in 46 linkage groups, and 1574 polymorphic AFLP markers were i

102 classical genetic linkage groups, molecular linkage groups, and a sequence-based physical map with t

103 n found specifically for the pyranose rings, linkage groups, and methoxy groups that can account for

104 The autosomal linkage groups appear to encompass a very large portion

105 Similar linkage groups are altered in human lung adenocarcinoma,

106 Each map coalesced into 18 linkage groups arranged into nine homeologous pairs.

107 These markers were mapped into 12 linkage groups at a LOD score of 5.0 and recombination f

108 re distributed along 571 cM, spanning all 10 linkage groups at an average marker separation of 1.3 cM

109 The algorithm progressively joins linkage groups at increasing recombination fractions bet

110 The markers were ordered in 16 linkage groups at LOD 6.0 using framework markers previo

111 Analysis of 35 BACs (5.25 Mb) from sorghum linkage group B revealed (and therefore mapped) two sorg

112 etween 73 and 132cM in length, and 4 smaller linkage groups between 7 and 40cM.

113 86-marker genetic map consisting of 10 major linkage groups between 73 and 132cM in length, and 4 sma

114 Br is on the same linkage group but approximately 26 cM away.

115 le complex pedigrees and detect two QTL on a linkage group, but that the number of individuals in a s

116 PTAG1 and PTAG2 are located on separate linkage groups, but their non-coding regions are highly

117 me 3 of rice, in synteny with these genes in linkage group C (sometimes referred to as linkage group

118 ucobrassicin degradation, were identified on linkage groups C01, C07 and C09.

119 Two flavonols mapped on linkage groups C07 and C09 and co-localise with the QTL

120 homeologous BACs were genetically mapped to linkage groups C1 and C2.

121 sian context, the number of QTL present on a linkage group can be treated as variable.

122 's ratchet, the perpetual stochastic loss of linkage groups carrying the fewest number of deleterious

123 distribution of genes across the 20 soybean linkage groups clearly indicated that genes were cluster

124 tween markers on the map is 10.5 cM, and the linkage groups collectively span 1780 cM.

125 e interval between markers is 3.7 cM and the linkage groups collectively span 2772 cM.

126 to build highly customizable maps, allow for linkage group comparisons, and annotate QTL regions.

127 ng the SSR- and AFLP-based maps generated 31 linkage groups comprising 1420 markers.

128 Quantitative trait locus mapping of the two linkage groups confirms that two loci control 56% of the

129 Three of the nine linkage groups contain regions in which there are high l

130 ers and spanned 131.2 cM, while the smallest linkage group contained 14 markers and spanned only 7.9

131 The largest linkage group contained 18 markers and spanned 131.2 cM,

132 Each linkage group contained 3-18 markers.

133 e mammalian Hox complex is divided into four linkage groups containing 13 sets of paralogous genes.

134 nabled the identification of five homologous linkage groups corresponding to five of the seven autoso

135 The map revealed 12 linkage groups corresponding to the expected number of c

136 The 12 major linkage groups covered a total length of 3294.2 cM, with

137 ci, and one EST were placed in 32 multipoint linkage groups covering 1958 cM.

138 pe II loci were contained in three two-point linkage groups covering 24.5 cM.

139 a total of 409 SNP markers were mapped on 12 linkage groups, covering 1622 cM.

140 of 28 chicken chromosomes are ordered among linkage groups defining the Ambystoma genome, and we sho

141 ne distinct clusters across seven of the ten linkage groups detected, indicating genomic incompatibil

142 , a group of 39 genes which are located on 4 linkage groups, dispersed on 4 chromosomes.

143 election based on mapped object location and linkage group displays.

144 traits all colocalized to the same region of linkage group five.

145 nterchromosomal translocations between three linkage groups flanked the deleted fragments, which, acc

146 The linkage group flanking the lethal factor showed strong h

147 ing of 742 markers, which comprises a single linkage group for each of the autosomes and the X chromo

148 esulting genetic map is complete, having one linkage group for each one of the 14 chromosomes.

149 non-redundant markers distributed across 12 linkage groups for a total length of 645 cM.

150 It spans 1311 cM in 24 linkage groups, for an average marker spacing of 2.4 cM.

151 gene, beta-catenin-2, located on a different linkage group from the previously studied beta-catenin-1

152 morgans of Satt288 on soybean chromosome 18 (linkage group G).

153 ains genomic sequence scaffolds mapped to 10 linkage groups (genome assembly release Tcas_3.0), genet

154 Each linkage group has been assigned to a chromosome and orie

155 The rainbow trout genetic linkage groups have been assigned to specific chromosome

156 Centromeres on all 25 linkage groups have been mapped on the RAPD zebrafish ge

157 Two linkage groups have recombination patterns that are cons

158 mutation tests on the data, including one on linkage group I that corresponds to the major sex locus.

159 Linkage group identities and homologies were determined

160 LA), easily wettable, hydrophobin-deficient, linkage group II).

161 ymorphism analysis placed the RIB43a gene on linkage group III.

162 s at 50 markers across the largest assembled linkage group in this species.

163 ) detection of linkage, i.e. construction of linkage groups in case of segregation distortion; (iv) d

164 Our map covers 1697 cM and identifies all 31 linkage groups in ECB.

165 Ten homologous linkage groups in loblolly pine (Pinus taeda L.) and Dou

166 We identified 11 and 12 linkage groups in the male and female consensus maps, re

167 data derived from a single genetic marker or linkage group - in this case mitochondrial DNA - can lea

168 ne conversion was observed within a selected linkage group including loci as close as 0.7 kb apart an

169 oid ancestor were identified for 10 pairs of linkage groups, including five chromosomes showing evide

170 cated and most duplicates occur on different linkage groups, indicating that as in other eukaryotic g

171 ice linkage groups, nested insertion of rice linkage groups, intrachromosomal inversions, and a nonre

172 The extent of genome coverage for these linkage groups is apparently high because the total map

173 nd type (deoxynivalenol or nivalenol) map on linkage groups IV and I, respectively.

174 A syntenic region on soybean linkage group J was found to contain at least two apyras

175 f kafirin storage protein genes from sorghum linkage group J, mixed with a selectable marker gene, di

176 resistance gene analogues (RGAs) on soybean linkage group J.

177 Homologies between the homeologous soybean linkage groups J and L and Arabidopsis chromosomes II an

178 BAC 076J21, derived from linkage group L, has sequences conserved in the pericent

179 tion, snh(st1), is a translocation involving linkage group (LG) 11 and LG 14.

180 afish ig f1ra has 21 exons and is located on linkage group (LG) 18, zebrafish ig f1rb has 22 exons an

181 ingle chromosome region at the distal end of linkage group (LG) 19, which controls male or female sex

182 Rf6 was mapped to linkage group (LG) 3 of the sunflower SSR map.

183 Distorted segregation ratios of markers on linkage group (LG) 5 were found, which indicate the poss

184 d g were mapped within 1 cM of each other on linkage group (LG) 7, syntenic with human CEBPA and G ge

185 ated with a terminus of the D-subgenome RFLP linkage group (LG) D04 by linkage analysis of an intersp

186 We mapped dim-2 between wc-1 and un-10 on linkage group (LG) VIIR and identified the gene by RFLP

187 precisely in single copy at the am locus on linkage group (LG) VR or the his-3 locus on LG IR.

188 egy and 'cross pollination' population type, linkage groups (LG) and phases were established for each

189 for sorghum chromosomes (SBI-01-SBI-10) and linkage groups (LG-01 to LG-10).

190 Two linkage groups, LG 13 and LG 9, were combined into one s

191 aps between 49.6 and 54.5 cm from the top of linkage group LG05C, a map position consistent with the

192 time (FT)-were identified and positioned on linkage groups LG1, LG3, and LG5.

193 zfAHR2 maps to a separate linkage group (LG22).

194 These markers were mapped to 29 linkage groups (LGs) with 30,591 unique marker positions

195 oplar MADS-box genes were distributed on all linkage groups (LGs), except LG XIX.

196 The map defines 10 linkage groups (LGs), presumably corresponding to the 10

197 s, and 23 SSRs proved useful for identifying linkage groups (LGs).

198 recombination frequency at the corresponding linkage groups (LGs).

199 ymorphisms (AFLPs) and genes, consists of 31 linkage groups (LGs; consistent with the karyotype).

200 breast height, and stem volume mapped to 11 linkage groups (logarithm of odds (LOD) >/= 2.5), and ex

201 ttern of synteny/colinearity between the two linkage groups manifested in the cell's dot density and

202 nto one syntenic group, and the chromosome 1 linkage group marker BNL4053 was reassigned to chromosom

203 th is 2373 cM and includes 212 markers on 42 linkage groups (mean marker spacing: 14 cM).

204 ocus multi-allelic gene mapping to molecular linkage group (MLG) F.

205 enetic map that associates classical genetic linkage groups, molecular linkage groups, and a sequence

206 hange of interstitial homeologous regions on linkage groups N7 and N16, and its detection was made po

207 hese included telomeric fusions between rice linkage groups, nested insertion of rice linkage groups,

208 l mainly to improve local marker ordering in linkage groups obtained in other ways.

209 ssive (s) alleles that comprise a co-adapted linkage group of genes.

210 In most taxa of clade E, the seven linkage groups of CEK either remained conserved (Chorisp

211 ysex locates to the tip of one of the larger linkage groups of the Ambystoma meiotic map.

212 ining single-copy inserts to one of the five linkage groups of the genome of this species.

213 The map has 15 linkage groups of three or more markers, agreeing with t

214 fferences were observed for between 9 and 11 linkage groups (of 17 total), depending on the compariso

215 at eight time periods were located on seven linkage groups (OKI03, OKI06, OKI18, OKI19, OKI23, OKI24

216 A genetic linkage group on chromosome 2 was selected under artemis

217 an gene, SCN11A, was mapped to the conserved linkage group on chromosome 3p21-p24, close to human SCN

218 They discovered that genes form linkage groups on chromosomes inherited in a Mendelian f

219 Assignments of cosmids to linkage groups on the basis of the genetic map vs. the e

220 ndem repeat (STR) loci have been assigned to linkage groups on the cat's 18 autosomes.

221 The two loci were mapped to linkage groups one and two respectively, in accordance w

222 dence for segregating QTL was found on three linkage groups, one of which was significant at the geno

223 eiosis to localize a mutation initially to a linkage group or to maintain relationships of linked all

224 t is that while it is genome-wide, across 10 linkage groups or chromosomes, it is very sparse, i.e.,

225 wise comparison of mapped probe data for two linkage groups or chromosomes.

226 6, OKI18, OKI19, OKI23, OKI24 and an unnamed linkage group) or associated with five unlinked markers

227 Ten linkage groups ordered more than 10 markers, with the la

228 nd the average intermarker distance for each linkage group ranged from 0.27 to 0.75cM.

229 Multipoint linkage groups ranged in size from 11.9 to 110.5 cM with

230 Linkage groups ranged in size from 7 to 185 cM and conta

231 ropose selecting the "best" marker from each linkage group, regardless of significance.

232 Lengths of arms were determined to orient linkage groups relative to a standard karyotypic layout

233 Our data indicate that these linkage groups result from the duplication of an ancestr

234 chloroplast marker, and sex, we resolved 15 linkage groups resulting in a map length of approximatel

235 erface includes a menu for direct chromosome/linkage group selection, a search form for selection bas

236 A combination of genetic mapping, linkage group selection, and functional genomics was use

237 inin-sensitive clone AJ has been analysed by Linkage Group Selection.

238 oth sex expression traits mapped to the same linkage group, separated by approximately 6 cM, along wi

239 This apyrase cluster was mapped to linkage group seven.

240 Two linkage groups showed an association (P =.0105) with the

241 The distribution of ESTs according to linkage groups shows relatively little variation (minimu

242 Linkage analyses yielded a total of 95 linkage groups, similar to the estimated number of germl

243 ar a cluster of domestication-related QTL on linkage group six (LG06), the majority of which have pre

244 oped that contained 735 marker loci in seven linkage groups spanning 707.8 cM.

245 and 43 SSRs, which were distributed on seven linkage groups spanning 715.77 cM.

246 a hybrid pedigree, and (iii) provides single linkage groups spanning each autosome.

247 The two maps contained 6554 SNPs in 32 linkage groups, spanning 2010 cM and 1917 cM for the NL

248 undred seventy RFLP loci were mapped onto 23 linkage groups, spanning 2210 cM.

249 A single linkage group spans each autosome.

250 The map consists of 12 linkage groups, spans 1480 cM, and contains 233 markers.

251 majority of which localized to nonhomologous linkage groups, suggesting trans-regulation by different

252 rmed at a minimum LOD of 3.0, with one small linkage group that included the sex locus.

253 e stress and senescence, plastoglobules form linkage groups that are attached to each other and remai

254 We suggest that inversions create linkage groups that cause sterility to persist between h

255 with linked markers are on a small number of linkage groups that could reflect the role of the large

256 plicate gene pairs identified segments of 20 linkage groups that may have arisen during a genome dupl

257 927, comprising of 182 markers and 11 major linkage groups, that correspond to the 11 previously ide

258 Y chromosome encompasses nearly half of the linkage group, there has been no perceptible degradation

259 espite being distributed across 15 of the 17 linkage groups, there was a substantial amount of cluste

260 Using genotypic frequencies for the linkage group, three hypotheses about the semilethal fac

261 lements are connected by the common chemical linkage groups through a set of flexible linkers.

262 of reference families, allowing one meiotic linkage group to be anchored to all 38 dog autosomes.

263 pproximately 3,341 cR(35,000) for five major linkage groups to 11,773 cR(35,000) for a comprehensive

264 he markers is known, and this has allowed 37 linkage groups to be anchored to the physical map.

265 oretic karyotypes unambiguously assigned all linkage groups to chromosomes and led us to conclude tha

266 genes located on mapped scaffolds to assign linkage groups to chromosomes.

267 sus map and facilitates the consolidation of linkage groups to represent the chromosomes n = 12 of lo

268 kers in the micronucleus fall into classical linkage groups under meiotic recombination and segregati

269 ngth and arm ratio and related to the proper linkage group using inversion heterozygotes.

270 cting stem growth processes is detected on a linkage group using our method, whereas it cannot be det

271 D score for all pairs of markers in the same linkage group using the EM algorithm; ordering the marke

272 gation of markers; partition of markers into linkage groups using cluster analysis; maximum-likelihoo

273 ciency of heterozygotes were found to map to linkage group V (chromosome 3), which is known to form r

274 mapped to a region on autosomal Xiphophorus linkage group V (LG V) known to contain the DIFF gene th

275 defined as the approximately 1-Mb domains of linkage group VI that are under recombinational suppress

276 e allele of cya-8 (cytochrome aa3 deficient, linkage group VII), resulting in thin, "transparent" myc

277 ed and defined 44 heterochromatic domains on linkage group VII, all relics of repeat-induced point mu

278 romosome were refined and a new telomeric RH linkage group was established.

279 isting of 2408 RAD markers distributed on 21 linkage groups was constructed for 'Carrizo'.

280 other map with 1230 RAD markers mapped on 20 linkage groups was constructed for 'El Toro'.

281 Nine linkage groups were detected, covering 1234 cM and ancho

282 Ten linkage groups were formed at a minimum LOD of 3.0, with

283 rosatellites and 6 biallelic markers, and 42 linkage groups were formed.

284 In total, 1611 linkage groups were identified, based on recombination f

285 Forty-one linkage groups were recovered, with average spacing betw

286 Four linkage groups were resolved and these were anchored to

287 maximum recombination frequency of 0.30, 20 linkage groups were resolved, resulting in a map length

288 levels of genomic conservation across the 27 linkage groups which allowed for functional SNP annotati

289 The markers were placed in 16 linkage groups (which defined 12 chromosomes) and a furt

290 of these separate maps, however, suggests 10 linkage groups, which agrees with the haploid chromosome

291 enetic analysis produced eight well-resolved linkage groups, which have been previously correlated wi

292 This map consists of 50 linkage groups with 8,521 SNP markers and an average res

293 34 SNPs for linkage mapping, resulting in 27 linkage groups with a minimum logarithm of odds (LOD) of

294 structed consisting of 112 marker loci on 14 linkage groups with a total map length of 1518 cM Kosamb

295 mework map consists of 174 marker loci on 14 linkage groups with a total map length of 1780 cM Kosamb

296 polymorphism analysis to identify and orient linkage groups with respect to chromosomes I-III.

297 a sire-based QTL analysis was used to detect linkage groups with significant effects on IPN resistanc

298 QTLs were strongly clustered within linkage groups, with 26 of 37 QTLs localized to six mark

299 the Fla10 motor subunit and the gene maps to linkage group XII/XIII near RPL9.

300 ich we have named FoxO5, maps to Xiphophorus Linkage Group XV.