ライフサイエンスコーパス: logo

1 group rather than outgroup or ambivalent (no logo).

2 led preference for art displayed next to the logo.

3 asure and depicted graphically by a sequence logo.

4 e binding site, as represented by a sequence logo.

5 atterns are usefully represented by sequence logos.

6 ition weight matrices and graphical sequence logos.

7 ce an approach built upon the concept of HMM logos.

8 The widely used tools, Logos, Al2co, Confind, and the entropy-based method, oft

9 ings placed next to the sponsoring corporate logo, an effect that correlates with modulation of the v

10 or men and scarves for women bearing the ABO logo and colors.

11 f these databases with LAMA, and for viewing logos and bootstrap trees.

12 d quantitative colour schemes, annotation of logos and integration with other plots.

13 Sequence Logos and its variants are the most commonly used method

14 lour-coding alignment positions, by sequence logos and optionally by colour-coding the residues of a

15 formation theory was used to create sequence logos and promoter models for eight phages of the T7 gro

16 visualize convolutional kernels as sequence logos and successfully identify similar motifs in the JA

17 Here, sequence logos and weight matrices were built to model SyCrp1 bin

18 Analyses of amino acid frequencies, sequence logos, and agreement with existing NES consensus sequenc

19 ifically bound by proteins by using sequence logos, and we can measure the corresponding binding ener

20 Logos are commonly used in molecular biology to provide

21 Skylign's interactive logos are easily incorporated into a web page with just

22 roducts fulfilling the criteria of the Dutch logo as part of their diets.

23 The criteria can be used for the logo assignment on food products, in order to stimulate

24 mation diagram that is similar to a sequence logo but with alignment data mapped on to secondary stru

25 be computed by dividing the information in a logo by the free energy of binding after it has been con

26 o increased precuneus response to both juice logos compared with a tasteless control (r = 0.45), sugg

27 gives natural results, we compared sequence logos composed from naturally occurring leucine-responsi

28 Each logo consists of stacks of letters, one stack for each p

29 Baum-Welch algorithm are available at http://logos.cs.uno.edu/~achurban.

30 of the MHMM algorithm is available at http://logos.cs.uno.edu/~achurban.

31 fferent DNA sequences, tools that can create logos directly from binding affinity data are useful to

32 but none of them generates weighted sequence logos directly from energy measurements or other sources

33 ased ventromedial prefrontal response during logo-elicited anticipation (r = -0.44).

34 These interactive logos enable scrolling, zooming, and inspection of under

35 Two Sample Logo extends WebLogo, a widely-used sequence logo genera

36 this purpose capable of reading barcodes and logos fabricated on various substrates using soft-lithog

37 The sequence logo for DNA binding sites of the bacteriophage P1 repli

38 The sequence logo for Fis binding sites showed the significance and l

39 ch provides a unified framework for creating logos for both sequence alignments and profile hidden Ma

40 e for our software, C2H2-enoLOGOS, generates logos for the DNA-binding preferences of the C2H2 zinc-f

41 rmation (as sequences, matrices and sequence logos) for individual TFs, groups of TFs or for all TFs

42 enoLOGOS generates sequence logos from a variety of input data, including energy mea

43 is a web-based tool that generates sequence logos from various input sources.

44 nes with intragenic FBs than in the sequence logos generated from FURTA-positive promoter regions.

45 However, the methods for logo generation in common use lack a proper statistical

46 are implemented in an open-source Web-based logo generation program, which is available at http://ww

47 Logo extends WebLogo, a widely-used sequence logo generator.

48 convenient and highly configurable sequence logo generator.

49 sites, kinase-substrate data sets, sequence logo generators, a Cytoscape plugin and BioPAX download

50 WebLogo generates sequence logos, graphical representations of the patterns within

51 The sequence logo has been widely used to represent DNA or RNA motifs

52 Sequence logos have become a crucial visualization method for stu

53 Sequence logos have become a popular way to graphically represent

54 the available web servers are able to create logo images from a set of aligned sequences, but none of

55 lication-ready DNA, RNA and protein sequence logos in a highly customizable fashion with features inc

56 uence motifs, and why should we use sequence logos instead of consensus sequences to represent them?

57 Two Sample Logo is a web-based tool that detects and displays stati

58 and intuitiveness, the traditional sequence logo is unable to display the intra-motif dependencies a

59 ace offering online creation of pairwise HMM logos is available at http://www.sanger.ac.uk/Software/a

60 ncludes methods for creation of pairwise HMM logos locally.

61 to estimate such motif properties as length, logo, number of instances and their locations solely on

62 cipants smelled a sweaty t-shirt bearing the logo of another university, with either their student id

63 ip of the experiment by a company endows the logo of the company with the capacity to bias revealed p

64 e experiment similarly endowed the gesturing logo of the company with the capacity to bias revealed p

65 eases in behavioral disinhibition toward the logo of the consumed beverage (r = 0.54; P = 0.02).

66 d a sweaty target t-shirt bearing either the logo of their own university, another university, or no

67 his method is demonstrated with barcodes and logos of compounds, approved by the Food and Drug Admini

68 s involved in Fur binding in the FB sequence logos of FURTA-positive clones with intragenic FBs than

69 servation signature also appears in sequence logos of sites for other replication origin binding prot

70 Two HMM logos, one for each profile, are drawn one upon the othe

71 Though useful for many purposes, sequence logos only show the average sequence conservation, and i

72 ed as the screen appearance of a brand name, logo, or identifiable trademark on products or product p

73 This study supports including a study-logo pen or pencil in a second questionnaire mailing to

74 ors conducted two US trials in which a study-logo pen or pencil was randomly included in a second que

75 e files, Skylign creates a novel interactive logo plot for inclusion in web pages.

76 put in the form of both tables and composite logo plots for visualizing SNP-motif interactions.

77 izable fashion with features including multi-logo plots, qualitative and quantitative colour schemes,

78 We redefine the information at a logo position as a per-observation multiple alignment lo

79 (e.g., color) and semantic (e.g., meaning of logo printed in T-shirt) components.

80 Sequence logos provide a richer and more precise description of s

81 ed motif information, including the sequence logo, PWM, consensus sequence and specific matching site

82 n weight matrix (PWM) and graphical sequence logo representations of the k-mer data.

83 n weight matrix (PWM) and graphical sequence logo representations of the k-mer data.

84 can be intuitively visualized with sequence-logo-style plots created using an extension to weblogo.

85 allowed us to show graphically, by sequence logos, that the spacing between the SD and the initiatio

86 layed art or the proximity of the sponsoring logo to the piece of art.

87 Using sequence logos to investigate TCR contact sites on HLA molecules,

88 ality ranging from dyad search and consensus logos to motif discovery and pair-wise alignment.

89 fs, we developed kpLogo, a probability-based logo tool for integrated detection and visualization of

90 The sequence logos were significantly different, indicating that the

91 We also introduce a PWM logo, which visually displays the implications of observ

92 ir own university, another university, or no logo, with either their student identity or their specif