ライフサイエンスコーパス: marker gene

1 ultaneously removing the unwanted selectable marker gene.

2 ich could be fully characterised by a single marker gene.

3 g in the excision of the target-site flanked marker gene.

4 ection in each of the 7 introns of the EPSPS marker gene.

5 d a Ds element into each intron of the EPSPS marker gene.

6 sted from a natural environment with a viral marker gene.

7 , there is a need for alternative selectable marker genes.

8 esses and have elevated expression of stress marker genes.

9 ncluding previously characterized NF-induced marker genes.

10 howed enhanced expression of leaf senescence marker genes.

11 ribosome binding sites, and yeast selectable marker genes.

12 gen fixation - and could be visualised using marker genes.

13 on in the regulatory regions of pluripotency marker genes.

14 oxidative burst and expression of PTI early marker genes.

15 res required no tissue culture or selectable marker genes.

16 akage, and the expression of leaf senescence marker genes.

17 ced expression of osteoblast differentiation marker genes.

18 ns that show no detectable expression of SMC marker genes.

19 uction of a large portion of innate immunity marker genes.

20 Bacteroides human, ruminant, and gull source-marker genes.

21 runk marker genes and gain expression of tip marker genes.

22 s of the 16S rRNA gene or other phylogenetic marker genes.

23 bition and the expression of various (1)O(2) marker genes.

24 istinct types and for identifying associated marker genes.

25 natomy and expression levels of SMC-specific marker genes.

26 ent expression of established digit blastema marker genes.

27 he expression pattern of conserved molecular marker genes.

28 ctionally distinct cell types and associated marker genes.

29 r cells (RPCs) that express Rx and other RPC marker genes.

30 cript and protein level, including known ABA marker genes.

31 riant reconstruction within species-specific marker genes.

32 s and analysed expression of cardiac lineage marker genes.

33 rentiation and mRNA expression of osteoclast marker genes.

34 munity (MTI), inducing the expression of MTI marker genes.

35 eta) signaling pathway and enhances fibrosis marker genes.

36 nd expression of hormone related or meristem marker genes.

37 ltilocus sequence typing and strain-specific marker genes.

38 ogenic HPV18 genome was replaced by CpG free marker genes.

39 regulating the expression of major decidual marker genes.

40 e senescence-specific and pathogen-resistant marker genes.

41 damage and elevated expression of DNA damage marker genes.

42 chronous occurrences of preplacodal and otic marker genes.

43 fq transcriptomes, mainly on shade-avoidance marker genes.

44 troscopy and the induction of singlet oxygen marker genes.

45 nes that are co-regulated with characterized marker genes.

46 inar identity using canonical cortical layer marker genes.

47 PPP1R14a and other neuronal differentiation marker genes.

48 mics and denitrification-specific functional marker gene abundance and expression.

49 and specific Cre recombinase expression and marker gene activation in all hepatocytes of adult Rosa2

50 hogen-associated molecular pattern-triggered marker gene after bacterial inoculation.

51 RKNs and investigated the expression of PTI marker genes after RKN infection using both quantitative

52 An analysis of cell activity marker genes after stimuli exposure revealed that only t

53 y, mineralization, and up-regulation of bone marker genes (alkaline phosphatase/ALPL, osteopontin/SPP

54 s, which cannot be predicted by phylogenetic marker genes alone.

55 l tools, including highly specific stem cell marker genes along with more rigorous experimental metho

56 The expression level of early osteogenic marker genes, ALP, Runx2, and type I collagen, which pla

57 more, TSH increased expression of osteoblast marker genes ALPL (8.2+/-4.6-fold), RANKL (21+/-5.9-fold

58 tify WRKY factors that bind the promoters of marker genes (Alternative oxidase1a, NADH dehydrogenaseB

59 uence reads to identify error-prone reads in marker gene analyses and their contribution to spurious

60 mm) and bulk soil (3-12 mm) using ribosomal marker gene analyses.

61 Marker gene analysis and staining for hemoglobin reveale

62 of cyclooxygenase 2 (COX-2) expression as a marker gene and by using gene expression profiling to id

63 eir bacterial and eukaryotic communities via marker gene and shotgun metagenomic sequencing.

64 o-transformants carrying both the selectable marker gene and the effector transgene.

65 1-related tissue-specific changes of various marker genes and a significant transcriptomic overlap wi

66 lf18, as measured by the induction of immune marker genes and callose deposition.

67 cells, the Notch-suppressed cells lose trunk marker genes and gain expression of tip marker genes.

68 y expressed genes, including important tuber marker genes and genes involved in cell growth, transcri

69 wn also reduced the expression of osteoclast marker genes and inflammation-induced cytokine genes.

70 xpressed Gtpbp2 can induce ventral-posterior marker genes and localize to cell nuclei in Xenopus anim

71 nactive UC, however, was the mobilization of marker genes and proteins for the Epithelial Mesenchymal

72 sed expression of osteoblast differentiation marker genes and reduced expression of genes associated

73 ecreased expression of a subset of adipocyte marker genes and reduced plasma TNFalpha levels.

74 Moreover, induction of stress marker genes and ROS-scavenging enzyme genes under vario

75 performance, it is effective at identifying marker genes and simultaneously it detects mislabelled a

76 the expression of early and late odontoblast marker genes and stage-specific proteases involved in de

77 between the expression levels of these known marker genes and the expression of the coregulated genes

78 anti-Plasmodium falciparum effector genes, a marker gene, and the autonomous gene-drive components ar

79 hologic features, shift in expression of EMT marker genes, and decrease in mir-200 levels consistent

80 es results in up-regulation of mitochondrial marker genes, and increased mitochondrial activity and u

81 sing oxygen consumption rate, brown-specific marker genes, and miR-30b and 378, which were abrogated

82 we find that while many of the early muscle marker genes are reprogrammed, global gene expression an

83 lely responsible for transcript induction of marker genes around 3 to 6 h after chemical inhibition o

84 sphate (Pi) offers an alternative selectable marker gene as demonstrated for tobacco and maize.

85 bstitutes for antibiotic/herbicide-dependent marker genes as well as surprisingly sensitive reporters

86 tified Cox7a1, well-known as brown adipocyte marker gene, as a cold-responsive protein of brown adipo

87 Surprising stochastic expression of marker genes associated with differentiated cell types w

88 onucleotide down-regulated the expression of marker genes associated with early primitive hematopoiet

89 sis) and mRNA expression of the hypertrophic marker genes, atrial natriuretic factor, brain natriuret

90 Phylogenetic marker gene-based studies have identified many bacteria

91 t of genes, and recapitulating expression of marker genes by BAC transgenesis or knock-in has generat

92 fication of neurons; transcript profiles for marker gene candidates identify molecular handles for ma

93 dditions to the genome such as insertions of marker gene cassettes or functional elements, without th

94 to induction of the important pro-apoptotic marker gene chop.

95 s and down-regulation of the G2/M cell-cycle marker gene, CYCB1;1 TCP20 and NLP6&7 also support root

96 ical analyses and expression analyses of the marker genes demonstrated that spermatogenesis is arrest

97 silico method, for identifying subpopulation marker genes directly from the original mixed gene expre

98 is finding, expression of the auxin-response marker gene DR5::GUS did not increase in spa mutant seed

99 ted and tested for altered expression of the marker genes during normal and stress conditions.

100 the expression of osteoclastogenesis-related marker genes during osteoclastogenesis, and prevented os

101 Silencing of SMC marker genes during phenotypic switching is partially me

102 but we observed misexpression of left-sided marker genes early in development, suggesting that nodal

103 Marker genes enable measurement of transduction and allo

104 ng genes of the PHB pathway and a selectable marker gene encoding spectinomycin resistance, was flank

105 on of the PATHOGENESIS-RELATED GENE1 defense marker gene, enhanced reactive oxygen species (ROS) burs

106 Identification of marker genes expressed in specific cell types is essenti

107 aining a single 6-kb piggyBac element with a marker gene expressing EGFP had the vector in new genomi

108 3 +/- 18 to 1497 +/- 29 mm(2), P < 0.01) and marker gene expression (atrial natriuretic peptide incre

109 Knockdown of Safb1 inhibited skeletal muscle marker gene expression and differentiation in cultured C

110 dentify neuroblasts in D. magna by molecular marker gene expression and division pattern.

111 naling is required for the maintenance of DP marker gene expression and feather regeneration, excessi

112 Th17 differentiation by digoxin lowered Th17 marker gene expression and IL-17 production and strongly

113 ntiate, as evidenced by increased osteoblast marker gene expression and increased mineralization.

114 ated with significant reduction in adipocyte marker gene expression and subcutaneous lipoatrophy.

115 oxygen consumption, but lipolysis and brown marker gene expression are increased; the latter is also

116 Positive correlation of marker gene expression between both cell lines and resem

117 activation and PHI1, WRKY33, and FRK1 immune marker gene expression but have reduced reactive oxygen

118 its Sox9-dependent activation of chondrocyte marker gene expression by blocking Sox9-enhancer DNA ass

119 genously applied brassinolide and altered BR marker gene expression demonstrate that zmbri1-RNAi tran

120 ovel mechanism for epigenetic control of SMC-marker gene expression during development through intera

121 d BEC and hepatocyte proliferation and liver marker gene expression during liver regeneration.

122 ryonic head morphogenesis, and developmental marker gene expression in combinatorial ey and toy knock

123 nockdown of WDR5 significantly decreased SMC-marker gene expression in cultured SMC differentiation s

124 vitro confirmed that miRNAs are required for marker gene expression in mature brown adipocytes.

125 the observed enrichment of lineage-specific marker gene expression in Nanog-negative cells is associ

126 R are unlikely to account for restoration of marker gene expression in the SHR lines when used with a

127 x (ECM) synthesis and increased pro-fibrotic marker gene expression including connective tissue growt

128 SnRK1-induced and -repressed marker gene expression strongly related to T6P above and

129 r morphological change, a lack of osteoblast marker gene expression, and an inability to mineralize m

130 Quantification of JA and SA, marker gene expression, and cell death confirmed that in

131 sistance to virulent pathogens, high defence marker gene expression, and salicylic acid accumulation.

132 Current methods enable targeting based on marker gene expression, development, anatomical projecti

133 s with a deficit in dermomyotome and myotome marker gene expression, suggesting that Ripply1 promotes

134 terized by a decline of stem cell-associated marker gene expression, the appearance of large polyploi

135 romotes VSMC proliferation and enhances VSMC marker gene expression, which may contribute to the defe

136 inducible expression of groEL activated PTI marker gene expression.

137 t signaling, suppresses VSMC differentiation marker gene expression.

138 negatively modulates Akt activation and VSMC marker gene expression.

139 on, as well as abnormal cranial neural crest marker gene expression.

140 tion in inducing SMC promoter activities and marker gene expression.

141 inforce the a-p boundary and refine anterior marker gene expression.

142 and albumin expression, qPCR for hepatocyte markers gene expression, Periodic Acid-Schiff staining f

143 f which is characterized by specific surface markers, gene-expression patterns, and distinct function

144 gnificantly inhibited Osx-induced osteoblast marker gene expressions.

145 ses, notably delayed upregulation of the PTI marker gene FLG22-INDUCED RECEPTOR-LIKE KINASE1, reduced

146 ings greatly expand the diversity of the key marker gene for anaerobic alkane cycling and outline the

147 Recent discoveries have shown that the marker gene for anaerobic methane cycling (mcrA) is more

148 transcriptional control and a low-expression marker gene for selection.

149 KEY MESSAGE: A new selectable marker gene for stable transformation of the plastid gen

150 A new selectable marker gene for stable transformation of the plastid gen

151 nary relationships between amoA, a conserved marker gene for Thaumarchaeota, and soil characteristics

152 critical problem of the absence of validated marker genes for many (including novel) subpopulations,

153 The development of new marker genes for plastid transformation is of crucial im

154 xpression of posterior Hox genes and that of marker genes for presomitic mesoderm and the chordoneura

155 DUF579 family members are co-expressed with marker genes for secondary cell wall formation.

156 In agreement, marker genes for SnRK1 activity are upregulated in sr45-

157 induction of DA1 and BB expression, several marker genes for the transition from proliferation to ex

158 curately captured differential expression of marker genes for type II (e.g. the Tas1r genes, Plcb2, T

159 ylinositol 3-phosphate] and up-regulation of marker genes from the synthesis phase of the cell cycle

160 The expression of the trichome development marker genes GLABRA2 (GL2) and Ethylene Receptor2 (ETR2)

161 Reporters for trichome developmental marker genes GLABRA2 (GL2) and Ethylene Receptor2 (ETR2)

162 expression of specific Mullerian epithelial marker genes, grow in soft agar and develop ectopic inva

163 Deep-sequencing of a universal marker gene has helped resolve community composition pat

164 Based on "marker" genes identified in our pathway analyses, we wer

165 The two marker genes, IGFL1 and C10orf99, were revealed as the u

166 2-1 mutants show reduced upregulation of PTI marker genes, impaired callose deposition, and defective

167 ngo system exhibit increased expression of a marker gene in the presence of dopamine and blue-light e

168 and reduced the expression level of the HCC marker gene in the Tak1-deficient liver.

169 ole tumor expression of corresponding immune marker genes in a large gene expression microarray cohor

170 reatment induces PGC-1beta and mitochondrial marker genes in adipose tissue of obese mice.

171 xpression of previously identified NP and NC marker genes in adult human NP cells from a range of age

172 A qPCR time course of (1)O2 induced systemic marker genes in directly and indirectly connected leaves

173 ngi were characterized by deep sequencing of marker genes in DNA purified from stool.

174 ormal responses of key ventral telencephalic marker genes in Foxg1(-/-) telencephalic tissue followin

175 gene expression of Alpl and other osteogenic marker genes in mouse osteoblasts and mesenchymal stem c

176 he cassette stably and efficiently expressed marker genes in progeny under either an artificial or an

177 accumulation and the expression of adipocyte marker genes in the cultured cells, and shRNA knockdown

178 f Th2 and Th17 cells and expression of their marker genes in the lungs.

179 tochrome B (eYHB) as plant-derived selection marker genes in the model plant Arabidopsis (Arabidopsis

180 PT results in increased expression of neural marker genes in vivo.

181 evidenced by lower mRNA levels of macrophage marker genes including F4/80, Cd68, Cd11b, Cd11c, and ma

182 Expressions of osteogenic marker genes including Osterix, but not Runx2, were upre

183 The VSMC differentiation marker genes, including alphaSMA, SM22, and CNN1, and en

184 embryos and knockout VSMCs, differentiation marker genes, including alphaSMA, SM22, and CNN1, were s

185 the expression of osteoclastogenesis-related marker genes, including CtsK, Nfatc1, Trap, Ctr.

186 ion inhibits the induction of major decidual marker genes, including IGFBP1, WNT4 and PRL.

187 Both effectors interfere with defense marker gene induction, but do not affect salicylic acid

188 to expressing elevated levels of pluripotent marker genes involved in proliferation and self-renewal.

189 ification for 16S rRNA or other phylogenetic marker genes is critical for microbiome research.

190 criptional repressor activity of KLF4 on SMC marker genes is dependent on cooperative binding with pE

191 of the species present, PCR of virulence or marker genes is mainly focused on a handful of known spe

192 nstructing 16S ribosomal RNA, a phylogenetic marker gene, is usually required to analyze the composit

193 th reduced steady-state expression of immune marker genes, leading to increased susceptibility to the

194 S and higher expression levels of senescence marker genes, leading to premature senescence of KO sili

195 A multi-marker gene-level analysis of rare (<1% frequency) singl

196 sponses, notably delayed upregulation of PTI marker genes, lower callose deposition, and mitogen-acti

197 curate novel method enabling reference-based marker gene matching (picking Operational Taxonomic Unit

198 Our objective was to test whether or not the marker genes may be lost by homologous recombination via

199 titative real time PCR (qRT-PCR) of fibrotic marker genes, measurement of hydroxyproline content and

200 e used to automatically detect cell-specific marker genes (MGs) located on the scatter radii of mixed

201 k for PERMANOVA power estimation tailored to marker-gene microbiome studies that will be analyzed by

202 1, and JAK2), and the alternative activation marker gene (MRC1) were analyzed on PBMCs and on CD14- a

203 to decode premature stop codons in metabolic marker gene mRNAs, that can be used as in vivo reporters

204 also restores the expression of osteoblastic marker genes, namely Ocn and bone sialoprotein, in Atf4(

205 Specific marker genes newly identified for the early hormone resp

206 playing decreased negative selection-related marker genes (Nur77 and CD5high) in CD4 single positive

207 analysis demonstrated reduced expression of marker genes of alternative activation in monocytes sort

208 most upregulated genes were Ms4a8a and Ym1, marker genes of alternatively activated myeloid cells.

209 ssion of proteins involved in malignancy and marker genes of epithelial-mesenchymal transition (EMT).

210 ons that develop chronological expression of marker genes of non-neural ectoderm, preplacodal ectoder

211 to investigate changes in DNA methylation in marker genes of T-cell subsets during allergen sensitiza

212 regulation of Hippo pathway target genes and marker genes of TGF-beta signaling, including biomarkers

213 (ROS) production and the expression of redox marker genes of the cytosol and mitochondrion.

214 ly correlated with the viral burden and with marker genes of the IFN antiviral cascade.

215 Marker genes of the JA and the JA/ethylene defense pathw

216 tically increased expression of osteogenesis marker genes only in the BMP group.

217 proaches require a priori information on the marker genes or composition of known subpopulations.

218 no effect on the mRNA levels of hypertrophic marker genes or the proinflammatory gene cyclooxygenase

219 it upregulated expression of beige adipocyte marker genes, particularly during an HFD, in association

220 full induction of the JA/ET defense pathway marker gene PLANT DEFENSIN1.2 (PDF1.2) and for resistanc

221 ly, an elevated expression of the adipogenic marker genes PPARgamma and Cebpalpha with a concomitant

222 gulated the expression of an oligodendrocyte marker gene PPP1R14a and other neuronal differentiation

223 the systemic acquired resistance-associated marker genes PR1, PR2 and PR5, transgenic plants over-ex

224 d genes, including ICS1 and the canonical SA marker gene, PR1.

225 wnregulation of neuronal and oligodendrocyte marker genes preceding clinical disease onset, whereas n

226 pression profiling did not identify a single marker gene predicting docetaxel response, despite an in

227 nd (v) pairwise identity of an additional 73 marker genes present in >90% prokaryotes.

228 NA-seq reveals that MMPs express a number of marker genes previously assigned to mesenchymal stem/pro

229 gulate expression of the articular cartilage marker gene Prg4.

230 Knockdown of Cdc7 by shRNA inhibits SMC marker gene promoter activities.

231 ed H3K4me1 and H3K4me3 enrichment within SMC-marker gene promoter loci.

232 stone H3K4me within smooth muscle cell (SMC)-marker gene promoters during the early stages of develop

233 4, LGR5, TP63 (p63), as well as neural crest marker genes PSIP1 (p75(NTR)), PAX3, SOX9, AP2B1 (AP-2be

234 level of RAB18- and RD19A-drought-responsive marker genes relative to WT plants.

235 Here we discuss mechanisms of marker-gene restoration, comment on results obtained usi

236 driven by identification of novel stem cell marker genes, revealing the existence of quiescent, slow

237 duction of transgenic plants, the selectable marker gene(s) used in the process are redundant, and th

238 -based methods such as database alignment or marker gene search, which limits the set of detectable c

239 RE1 transcripts, induction of the senescence marker gene SENESCENCE-ASSOCIATED GENE12, and cell death

240 ence (MIMS), and Minimum Information about a Marker Gene Sequence (MIMARKS).

241 VAMPS allows researchers using marker gene sequence data to analyze the diversity of mi

242 Users can upload marker gene sequences and associated metadata; reads are

243 taxonomic classification of any phylogenetic marker gene sequences.

244 Amplified marker-gene sequences can be used to understand microbia

245 Marker gene sequencing of 16S ribosomal genes revealed t

246 Here, using high-throughput marker gene sequencing of soils collected from 18 sites

247 niques have seldom been applied to microbial marker gene sequencing studies, which have mostly relied

248 al windows, we used high-resolution 16S rRNA marker gene sequencing to examine outcomes in our mouse

249 ene assemblies are a powerful alternative to marker gene set and 16S short reads.

250 Marker gene silencing assays and genome-wide RNA sequenc

251 d protein extracts induce the Mi-1.2 defense marker gene SlWRKY72b, indicating that both saliva and e

252 allowed excision and recycling of selectable marker genes (SMGs).

253 g the importance of replication in microbial marker gene studies.

254 ndersampling-a common feature of large-scale marker-gene studies.

255 Concordantly, expression levels of brown marker genes, such as Prdm16, Cidea, Pgc1alpha, Pparalph

256 he expressions of the atrioventricular canal marker genes, such as tbx2b, hyaluronan synthase 2 (has2

257 a through enhanced activation of mesenchymal marker genes, such as Zeb1, Snail1, Pai1, and alphaSMA,

258 it sporadic expression of many of these same marker genes, suggesting the existence of a general prog

259 bundance in sparse high-throughput microbial marker-gene survey data.

260 Amplicon-based marker gene surveys form the basis of most microbiome an

261 me was measured with a two-color fluorescent marker gene that converts from expressing tandem dimer T

262 I gene becomes a highly efficient selectable marker gene that facilitates the selection of transgenic

263 ies' gene catalog is measured using a set of marker genes that are expected to be present.

264 Finally, we identified novel marker genes that characterize rare neuronal populations

265 ion clock." Using hundreds of stage-enriched marker genes that compose this clock, we show that extre

266 adata about the specimen source analyzed and marker genes that serve as the most useful features in m

267 tissue, and yeast cell cycle, revealed novel marker genes that were otherwise undetectable using exis

268 to inhibit the expression of a Pi starvation marker gene (the high-affinity Pi transporter PHT1;4).

269 thus far have relied on a single selectable marker gene, the spectinomycin resistance gene aadA.

270 d for three specific inflammation-associated marker genes (TNF-alpha, IL-8, IP-10) using qRT-PCR.

271 Here we used high-throughput sequencing of marker genes to elucidate the responses of soil fungal,

272 f community fingerprinting and sequencing of marker genes to identify community changes associated wi

273 we adopt a selection system that allows for marker genes to integrate into the genome through homolo

274 ession measurements of a small subset of 100 marker genes to predict transcriptome-wide gene abundanc

275 S and 18S rRNA gene have been widely used as marker genes to profile diversity of microorganisms in e

276 present an approach that uses clade-specific marker genes to unambiguously assign reads to microbial

277 Investigation of the effect on marker gene transcript levels suggests that the Xoc dite

278 e promoters, resulting in suppression of SMC marker gene transcription and, consequently, in inhibiti

279 lates SMC differentiation via activating SMC marker gene transcription.

280 ted activation of ADH1 and activates hypoxia marker genes under both anoxic and normoxic conditions.

281 e generated MSTN-mutant Meishan pigs with no marker gene via zinc finger nucleases (ZFN) technology.

282 decreased transactivation of EMT-associated marker genes, vimentin and fibronectin.

283 nt was detected when the modified rice EPSPS marker gene was inserted with the Ac transposon 5' end,

284 iescent center (QC) cells, expression of the marker gene was silenced specifically in the QC cells wi

285 and down-regulation of VSMC differentiation marker genes was enhanced.

286 The abundance of bacterial marker genes was identified in sediments contaminated by

287 nrichment of RNA polymerase II at primed PTI marker genes was observed in environmentally challenged

288 Escherichia coli (using blaNDM and mcr-1 as marker genes), we sampled poultry, dogs, sewage, wild bi

289 ations and analyses of core and phylogenetic marker genes, we show that patterns of diversity for the

290 capturing strain variation in clade-specific marker genes were able to distinguish among 100s of indi

291 Fluorescent marker genes were constructed and bombarded into five de

292 , H2O2- and photooxidative stress-responsive marker genes were found to be dramatically up-regulated

293 eoclast numbers and expression of osteoclast marker genes were increased in parallel with reduced Erk

294 UCROSE NONFERMENTING-RELATED KINASE1 (SnRK1) marker genes were most affected in reproductive tissue.

295 pe and Ppard null cells, while macrophage/DC marker genes were up-regulated.

296 ed strain were simultaneously substituted by marker genes, which were subsequently excised using Cre/

297 a dark period induced stress and cell death marker genes while reducing photosynthetic efficiency.

298 ss C. cellulans, which revealed 49 potential marker genes with known association to human infections,

299 By combining the detection of a pair of marker genes with operon prediction using intergenic dis

300 ation needed to select suitable phylogenetic marker genes within particular lineages.