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1 1 megabases of the total genome size of 61.1 megabases).
2 ng fragments ranging from 5 kilobases to > 1 megabase.
3 th a median of 0.35 non-silent mutations per megabase.
4 human genome with Hi-C at a resolution of 1 megabase.
5 overgos contained three to nine overgos per megabase.
6 per megabase to greater than 20 overgos per megabase.
7 ed enhancer-enhancer hubs spanning up to one megabase.
8 pha-satellite DNA, which spans up to several megabases.
9 stance scales, ranging from tens of bases to megabases.
10 tion control is apparently lost over several megabases.
11 el transcriptional interaction spanning 14.3 megabases.
12 lted in a final genome error rate of 1 in 10 megabases.
13 r of its six chromosomes, each spanning many megabases.
14 y 96 loci from a genome of approximately 400 megabases.
15 arthritis severity at a resolution of a few megabases.
16 o be caused by a deletion of approximately 2 megabases.
17 been impractical for regions beyond tens of megabases.
18 D7S3314, corresponding to a distance of 27.2 megabases.
19 corresponding to a physical distance of 9.5 megabases.
20 uced no false positives in analysis of three megabases.
21 generate extended haplotypes on the order of megabases.
22 e into 625 contigs with an N50 length of 2.4 megabases.
23 ordination of NL contacts, even over tens of megabases.
25 ng or adjacent gains or losses, covering 360 megabases (12% of the genome) were identified in these p
26 ished dosage of the genes deleted in the 1.5-megabase 22q11 minimal critical deleted region in a mous
27 esis, and progress toward assembly of a 3.97-megabase, 57-codon Escherichia coli genome in which all
28 of the hypermutated phenotype (>12 mutations/megabase); 6 had mutation frequencies >200/megabase, and
29 y, 0.02 and 0.07 nonsynonymous mutations per megabase, a dramatically lower average mutational freque
30 e characterization of haplotypes that extend megabases along the human genome using high molecular we
31 lele-specific chromatin analysis of over 100 megabases along the maternally or paternally duplicated
32 f CENP-A and histone H3.1 binding within the megabase, alpha-satellite repeat-containing centromeres
33 ogies, which has led to a decreased cost per megabase and an increase in the number and diversity of
34 exonic somatic mutation rate of 12.0 events/megabase and identified the majority of genes previously
35 we produced high-quality sequence data of 59 megabases and assembled ~200,000 reads into 19,501 conti
38 nal centromeres span several kilobases up to megabases and do not seem to have DNA sequence specifici
39 ntotheonella' with genomes of greater than 9 megabases and multiple, distinct biosynthetic gene clust
40 nome-wide array data to identify ROHs (>1 megabase) and conducted global burden and locus-specific
41 ates even in heavily treated CRPCs (2.00 per megabase) and confirmed the monoclonal origin of lethal
43 behavior of recombination rates over large (megabase) and small (kilobase) scales lead us to suggest
45 s/megabase); 6 had mutation frequencies >200/megabase, and 5 of these had somatic mutations in POLE,
46 somatic mutation rate was 1.2 mutations per megabase, and there was a median of 230 somatic rearrang
49 ty, from simple "point" centromeres to multi-megabase arrays of DNA satellites, has defied explanatio
53 example, FOXO1, AZI2) often situated several megabases away; and finally, regions associated with dif
55 mes in pools, we assembled a sequence of 774 megabases carrying 5326 protein-coding genes, 1938 pseud
57 rs rapidly after DSB formation, spreads over megabase chromatin domains, and is required for stable a
58 n centromeres are positioned within specific megabase chromosomal regions containing alpha-satellite
61 h hierarchy of structural layers, from multi-megabase compartments to sub-megabase topologically asso
62 including medium size (from 1 kilobase to 1 megabase) deletions and duplications, and balanced inver
63 that interacts in cis with PTHLH over a 24.4-megabase distance and in trans with the sex-determining
72 from 10-20 kb (enhancers/repressors) to many megabases during intra- and inter-chromosomal interactio
74 gous end-joining using kilobase, rather than megabase, fragments of DNA, which we refer to as "stitch
83 of the highly polymorphic approximately 520-megabase genome of the Florida lancelet Branchiostoma fl
85 se about two-thirds of the approximately 160-megabase genome, reflecting a recent massive expansion o
89 ave sequenced the 36 chromosomes of the 32.8-megabase haploid genome of Leishmania major (Friedlin st
90 yndrome (22q11DS), the result of a 1.5- to 3-megabase hemizygous deletion on human chromosome 22, res
91 he human genome assembly correspond to multi-megabase heterochromatic regions composed primarily of t
99 he level of large chromosomal domains (0.5-5 megabases in mammals) within which replicons are activat
104 ng from single modified DNA bases to several megabases in the case of heterochromatic histone modific
105 lay high haplotype homozygosity over several megabases in the Dw3 region, but most markers linked to
106 at an intermediate scale (10 kilobases to 4 megabases), including 64 insertions affecting 58 genes.
107 essive zones (range, 0.35 approximately 5.98 megabases), including a 14-gene cluster located on 16p11
110 ve; we found that allelic variation in a 0.3-megabase interval in the class I D locus confers substan
111 nt to localize the effect of Ctrq-3 to a 1.2-megabase interval of genomic DNA that contains Irgb10 an
113 yndromic uterine fibroids, we explored a two-megabase interval spanning FH in the NIEHS Uterine fibro
114 ond, we examined genetic variation in the 15-megabase interval surrounding the QTL in small and giant
116 incidence of approximately three lesions per megabase is preferentially repaired in the transcribed s
119 y correlated with rates of recombination per megabase, levels of sequence polymorphisms do not fully
120 Xi exhibits extremely large loops, up to 77 megabases long, called "superloops." DXZ4 lies at the an
121 locus, human chromosome 17q21.31, contains a megabase-long inversion polymorphism, many uncharacteriz
123 of mammals and birds can be partitioned into megabase-long regions, termed isochores, with consistent
124 vidual chromosomes, and specific segments at megabase (Mb) and kilobase (kb) resolutions of single av
126 1(env), was determined by comparing the 1.94-megabase (Mb) genome sequence of the isolate with that r
127 (HSY) and its X counterpart, yielding an 8.1-megabase (Mb) HSY pseudomolecule, and a 3.5-Mb sequence
128 irless skin of the extremities (3 and 14 per megabase (Mb) of genome), intermediate in those originat
129 d that targeted deletion in mice of the 0.11 megabase (mb)-long minimal deleted region (MDR) encompas
131 ransfer of bacterial genomes as large as 1.8 megabases (Mb) into yeast under conditions that promote
132 infestans genome, which at approximately 240 megabases (Mb) is by far the largest and most complex ge
133 re than 1,000 somatic mutations found in 274 megabases (Mb) of DNA corresponding to the coding exons
136 are being produced, going from the initial 1 Megabases (Mb) resolution to the current 10 Kilobases (K
137 ggested that Bxs6 lies between 59.7 and 74.8 megabases (Mb), although the interval of 0.6 Mb between
138 These MCRs possess a median size of 2.7 megabases (Mb), with 21 (33%) MCRs spanning 1 Mb or less
141 complex phenotypes can be linked to long (>1-megabase [Mb]) runs of homozygosity (ROHs) detectable by
142 e polymorphism (SNP) arrays, we mapped a 1.3 megabase minimally deleted region including only the rep
146 Using a multiple alignment of more than a megabase of contiguous sequence from eight mammalian spe
147 that the observed skew of GNGNAGGG within 1 megabase of dif occurred by chance in E. coli is 1.7 x 1
150 genes expected based on number of genes per megabase of genome explains the observed density suggest
151 9.4% of the euchromatic DNA and includes one megabase of heterochromatic sequence within the pericent
154 cer-trapping strategy in mice to scan a half-megabase of the 8q24 gene desert encompassing the prosta
155 ize (Zea mays) B chromosome contains several megabases of a B-specific repeat (ZmBs), a 156-bp satell
156 M activation is not amplified by H2AX across megabases of chromatin to induce global signaling and re
158 quencing) technologies, we examined over 100 megabases of DNA from amplified extracts, revealing unbi
159 n of the ancestral human genome, we identify megabases of DNA lost in different human lineages and pi
160 somatic mutations across approximately 1,800 megabases of DNA representing 1,507 coding genes from 44
161 oligonucleotides encoding approximately 2.5 megabases of DNA, which is at least 50 times larger than
162 ed computational and manual annotation of 24 megabases of heterochromatic sequence in the Release 5 D
169 he genetic interactions are located within 5 megabases of regions of known physical chromosome intera
170 ch to map the genomic locations of almost 20 megabases of sequence unlocalized or missing from the cu
172 gregate, we recovered 1.34 gigabases and 303 megabases of the Neandertal and Denisovan genome, respec
173 enome reduced in size by nearly 8%, with 1.1 megabases of the synthetic genome deleted, inserted, or
174 with alleles that are highly divergent (15.1 megabases of the total genome size of 61.1 megabases).
175 ds with random errors, we assembled 99% (244 megabases) of the Oropetium genome into 625 contigs with
176 , DNA content increased by approximately 250 megabases, often representing a substantial fraction of
178 omosome is a vast region of approximately 15 megabases on distal 8p that appears to have a strikingly
179 repeat satellite III (SAT III), which spans megabases on the X chromosome of Drosophila melanogaster
180 ost significant linkage to a single locus (8 megabases) on chromosome 4 (logarithm of the odds [LOD]
181 omarkers Associated to Structural Ensembles (MEGABASE), on odd-numbered chromosomes, we predict the s
184 umina exon and RNA sequencing revealed a 1.2-megabase pair deletion encompassing the 27- and 50-kD ga
185 asts and erythroblasts the folding of 10-160-megabase pair engineered chromosome regions consisting o
186 ected indels ranging from 10 base pairs to 1 megabase pair that are difficult to detect via a single
188 ter than the reference genome and that 420.2 megabase pairs of common repeats and 99.1% of validated
190 cal length over the distal first euchromatic megabase pairs of the X chromosome, our data suggest tha
192 ing control region is the promoter for a one megabase paternal transcript encoding the ubiquitous pro
193 mutations averaged two to six mutations per megabase per cell, similar to that seen in many cancers,
195 ire ETV1 locus (7p21) is rearranged to a 1.5-megabase prostate-specific region at 14q13.3-14q21.1 in
197 The disease gene mapped to a less than 2-megabase recessive locus at 12q21.33 with a logarithm of
199 usted multivariate linear analyses in the 40-megabase region encompassing the linkage peak were condu
202 ssociation mapping across an approximately 4 megabase region of the xMHC using a validated panel of s
205 ygous deletion of mouse chromosome 11B3, a 4-megabase region syntenic to human 17p13.1, produces a gr
207 f ICF1-iPSC methylomes also identifies large megabase regions of CG hypomethylation typically localiz
209 ng hybridization-based purification of multi-megabase regions with sequencing on the Illumina Genome
210 to high quality and spans approximately 132 megabases, representing approximately 4.5% of the human
212 ome sequences within the linkage region (4.8 megabases) revealed missense mutation c.591C>A p.Glu197A
213 n studies indicate that the LDD test, at the megabase scale used, effectively distinguishes selection
214 fferent epigenetic states at the kilobase-to-megabase scale, a length scale that is directly relevant
215 omosomes maintain domain organization at the megabase scale, but show variable cell-to-cell chromosom
222 ers of genes that promote reprogramming, and megabase-scale chromatin domains spanned by H3K9me3, inc
223 We report locus-specific disintegration of megabase-scale chromosomal conformations in brain after
224 th scales, ranging from single base pairs to megabase-scale chromosomal domains, and discuss the emer
225 abilistic 3D folding states for a contiguous megabase-scale chromosomal region, supporting the divers
228 that 13 to 41% of neurons have at least one megabase-scale de novo CNV, that deletions are twice as
231 e or repressed chromatin states, up to multi-megabase-scale domains associated with nuclear positioni
232 revealed that chromosomes are organized into megabase-scale domains that demarcate active and inactiv
233 ated across cancer types are concentrated in megabase-scale domains that occur near the telomeres and
236 y, we assign genetic aberrations to specific megabase-scale haplotypes generated from whole-genome se
237 ing from thousands of single base changes to megabase-scale path reorganizations, gap closures, and l
239 spects of genome instability-specifically, a megabase-scale rearrangement underlying two genomic diso
240 indings reveal considerable variation in the megabase-scale recombination landscape among recently di
241 expression of clusters of genes embedded in megabase-scale regions marked with H3K36me2 and that con
242 by MeCP2, but also enriched within extended megabase-scale regions surrounding MeCP2-repressed genes
243 estimated haplotypes to characterize mosaic megabase-scale structural mutations in 31,100 GWA study
250 overy by allowing fine mapping to only a few megabases, significantly decreasing the number of potent
251 y used to assemble genetic constructs in the megabase size range, and has previously been used to tra
252 an chromosomes, centromeric regions comprise megabase-size arrays of 171 bp alpha-satellite DNA monom
253 A in a single cell and to randomly partition megabase-size DNA strands into multiple nanoliter compar
255 the conservation of coordinately replicated megabase-sized "replication domains" punctuated by origi
256 ome organization, including segregation into megabase-sized active and inactive compartments, and par
257 eres of Arabidopsis thaliana are composed of megabase-sized arrays of a 178-bp satellite repeat.
258 yotes, centromeres are typically composed of megabase-sized arrays of satellite repeats that evolve r
260 ariation of the genome involves kilobase- to megabase-sized deletions, duplications, insertions, inve
262 ve successfully used to prepare high-quality megabase-sized DNA from hundreds of plant, animal, fish,
264 f-renewing cells by inducing derepression of megabase-sized gene domains harboring downstream effecto
266 though re-formation rates vary greatly, many megabase-sized loops recovered in under an hour, consist
268 iate for aligning many, but by no means all, megabase-sized regions of multiple mammalian genomes.
269 CISMR (CRISPR-mediated isolation of specific megabase-sized regions of the genome), which enables us
270 f regulatory genes, stable gene deserts, and megabase-sized regions rich in moderately conserved nonc
271 Cen2, Cen3, Cen5, Cen7, and Cen8) contained megabase-sized satellite repeat arrays that are unique t
276 an initial analysis of the approximately 730-megabase Sorghum bicolor (L.) Moench genome, placing app
278 Y chromosomes of Drosophila contain multi-megabase stretches of satellite DNA repeats and a handfu
279 cleotide variants (SNVs; average of 11.2 per megabase), structural variants (SVs; average of 46), or
280 esults in reduced DCC binding across several megabases surrounded by topologically associating domain
281 an adjacent 'gene desert' of approximately 2 megabases that contains the long non-coding RNA gene PVT
282 xpectedly, UCYN-A has a reduced genome (1.44 megabases) that is structurally similar to many chloropl
283 in the genome of these lymphomas was one per megabase, there were a tremendous number of copy number
284 nsus region was narrowed down by more than a megabase to 2.2 Mb at chromosome 22q12.3 flanked by D22S
286 rearrangements ranging in size from several megabases to a few hundred base pairs can be generated b
287 that, for genomes spanning approximately 100 megabases to approximately 10 gigabases, errors become i
290 ers, from multi-megabase compartments to sub-megabase topologically associating domains (TADs) and su
291 conformation capture (Hi-C) has revealed sub-megabase topologically associating domains (TADs), which
292 associated regulatory elements, can exceed a megabase, transgenic complementation in mice has, in spe
293 ion in recombination rates (centimorgans per megabase) was observed along the X chromosome, ranging f
294 th eve enhancers across distances of several megabases, when the communication is mediated by Homie.
295 At the intermediate scale of kilobases to megabases, which encompasses the sizes of genes, gene cl
298 ersonii, which consists of approximately 830 megabases with an N50 of 44,303 bp anchored to 12 chromo
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