ライフサイエンスコーパス: microbial

1 aset, currently one of the largest published microbial 16S rRNA sequence dataset.

2 isms acting through pore characteristics and microbial accessibility.

3 In human intestinal organ cultures, microbial activation of Vgamma9/Vdelta2 T cells promoted

4 bonomic studies implicated variations in gut microbial activities that mapped onto tacrine-induced tr

5 We further observed mutual enhancement of microbial activity and photodegradation at a daily scale

6 ctromethanogenic biocathode, and/or maintain microbial activity during voltage interruptions.

7 copoeias, preservatives should be tested for microbial activity using traditional viable count techni

8 Compositional changes related to microbial activity, as well as proteolytic and lipolytic

9 Understanding human effects on microbial activity, fitness and distribution is an impor

10 changes all have the potential to alter soil microbial activity, mediated by changes in plant inputs.

11 nic N to soils broadly show a suppression of microbial activity, which is inconsistent with N limitat

12 which is influenced by enteral nutrients and microbial activity.

13 These results identify a genetic basis for microbial adaptability and underscore the importance of

14 molecular evolution machines that facilitate microbial adaptation to environmental changes.

15 Unraveling the mechanisms of microbial adaptive evolution following genetic or enviro

16 ns depend on available information regarding microbial aetiology and antimicrobial susceptibility, bu

17 llectively, these results suggest that these microbial alpha-mannosyl glycolipids are capable of bein

18 Links between microbial alterations and systemic inflammation have bee

19 This enabled the direct visualization of the microbial and chemical makeup of a human lung from a cys

20 ain, given differences in litter quality and microbial and detritivore community responses to tempera

21 ife, and that cytokine responses to specific microbial and viral stimuli are associated with the deve

22 umerous seeps at the seafloor, where complex microbial, and sometimes animal communities flourish.

23 le for the induction of IgE sensitization to microbial antigens.

24 Employing this microbial approach offers a potential solution for valor

25 lic activity and functional diversity of the microbial assembly.

26 , inflammatory receptor-ligand interactions, microbial-associated molecular patterns (MAMPs), pathoge

27 identification of phytoplankton species and microbial biodiversity is necessary to assess water ecos

28 test displaying different amounts of adhered microbial biomass and significantly distinct bacterial a

29 ER from incorporation of labeled carbon into microbial biomass are treated as degradation products.

30 monitoring CO2 and CH4 production, CUE, and microbial biomass.

31 Microbial biophotovoltaic cells exploit the ability of c

32 able count techniques; the use of whole cell microbial biosensors potentially provides an alternative

33 cal models, which are traditionally based on microbial (biotic) degradation enabled by precipitation

34 Moisture response functions for soil microbial carbon (C) mineralization remain a critical un

35 c CH4 in the future, in addition to enhanced microbial CH4 production.

36 mising combination of plant engineering with microbial chassis development for the production of valu

37 ich integrates graph learning algorithm with microbial co-occurrences and associations obtained from

38 n of either symbiotic responses that promote microbial colonization or immune responses that limit it

39 of different species, stages of ripeness and microbial colonization.

40 These microbial commensals are essential to skin health and ca

41 an now readily isolate C. auris from complex microbial communities (such as patient skin, nasopharynx

42 nt communities therein to facilitate complex microbial communities and functions in urban systems.

43 sights into how antibiotic treatment affects microbial communities and host health.

44 Results suggest that the microbial communities and performance of bioelectrochemi

45 shape biogeochemical processes via shifts in microbial communities and subsequent changes to their ph

46 cology, but detailed investigations of their microbial communities are rare.

47 r GI segments and that the stratification of microbial communities as well as shift of microbial meta

48 It harbor multiple commensal microbial communities at different body sites, which pla

49 Microbial communities at impacted sites differed in comp

50 ars of carefully managed restoration on soil microbial communities at the Nachusa Grasslands in north

51 re previously unattainable information about microbial communities can be discovered.

52 Interrogation of environmental microbial communities combined with in vivo experiments

53 We propose the use of natural microbial communities for CCS monitoring and CO2 utiliza

54 Moreover, pikas that feed on moss harboured microbial communities highly enriched in Melainabacteria

55 Here we compared soil microbial communities in 41 urban parks of (i) divergent

56 iffness and exerts a beneficial shift in gut microbial communities in a rat model that mimics human m

57 Microbial communities in bare fallowed soil showed a mar

58 The eO3 treatment did not change the microbial communities in the rhizosphere, but altered th

59 ffects on dissolved organic matter (DOM) and microbial communities in the surface ocean.

60 Yet, microbial communities in urban green space soils remain

61 our understanding of N deposition effects on microbial communities is far from complete, especially f

62 l 16S rRNA gene was used to characterize the microbial communities of indoor microcosms that were eit

63 Our results indicate that subsurface microbial communities predominantly assemble by selectiv

64 rtension were associated with alterations in microbial communities relevant in blood pressure control

65 n the patterns and rates of gene flow within microbial communities remains unclear.

66 Bacteria often live in biofilms, which are microbial communities surrounded by a secreted extracell

67 sts harboured distinct but less diverse soil microbial communities than urban parks that are under co

68 The spatial ecology of the microbial communities that inhabit the human body-in par

69 regimes is a strong selective force shaping microbial communities throughout the water column.

70 Moreover, the tombstone-associated microbial communities varied as a function of rock type,

71 Microbial communities were analysed using amplicon seque

72 and the structure and activity of associated microbial communities were examined.

73 While similar microbial communities were present in the anode suspensi

74 from human stool, chemostats, and artificial microbial communities were sequenced by 15 laboratories

75 Cooperative interactions enrich microbial communities with a higher degree of robustness

76 ed on principal coordinate analysis of their microbial communities, but they also show an overlapping

77 be useful for in-field sampling of plant and microbial communities, for example, by portable ambient

78 Among the human health conditions linked to microbial communities, phenotypes are often associated w

79 ifficile colonization in complex human fecal microbial communities, whereas treatment with either gly

80 the sheer diversity and complexity of these microbial communities.

81 mination and development of electrosynthetic microbial communities.

82 de insight into the selective forces shaping microbial communities.

83 cemeteries harbouring taxonomically distinct microbial communities.

84 We describe a molecular mechanism by which a microbial community affects animal behavior.

85 support for the hypothesis that variation in microbial community affects performance in L. melissa.

86 composition of the transcriptionally active microbial community and H. pylori gene expression were d

87 -exposed mice had significant differences in microbial community composition compared to non-stressed

88 regulating rain-induced soil CO2 pulses and microbial community composition, and may have significan

89 In this study, we found the microbial community composition, structure and functiona

90 A sizable reduction was observed in microbial community diversity during a large Microcystis

91 ronmental conditions, assembly processes and microbial community dynamics is necessary to predict mic

92 In this study, we categorize the microbial community in mangrove sediment samples from fo

93 RATIONALE: Differences in the lung microbial community influence idiopathic pulmonary fibro

94 ng dysbiosis and that the FODMAP-altered gut microbial community leads to intestinal pathology.

95 Multivariate analysis, using all microbial community members, was also conducted.

96 studied can potentially be used to modulate microbial community structure and/or function.

97 ds an important dimension to the analysis of microbial community structure.

98 The effects of NP on microbial community structures were significant (P < 0.0

99 ent processes shape the final drinking water microbial community via selection of community members a

100 The microbial community was dominated by bacteria belonging

101 can be described as a dysbiosis of the oral microbial community, in which acidogenic, aciduric, and

102 g the virulence potential of the periodontal microbial community.

103 nor within the entire organohalide-respiring microbial community.

104 mic shifts among the typical nosZ-expressing microbial community.

105 sequence dataset of a T. swinhoei-associated microbial community.

106 eria and DAMO bacteria jointly dominated the microbial community.

107 ng of predator-prey interactions, changes in microbial composition and function, and subsequent reper

108 Treatment operations drove the microbial composition more strongly than sampling time.

109 The microbial composition of induced sputum specimens collec

110 usal relationships between the chemistry and microbial composition of the rhizosphere.

111 as performed to investigate the influence of microbial composition of the transplanted material on th

112 hydrological shifts correlated to changes in microbial composition, alpha, beta and phylogenetic dive

113 tion within the social network predicted gut microbial composition.

114 We establish that these microbial consortia act as cartels, whereby population d

115 erall quality because of high water loss and microbial contamination.

116 fluence plant phenotype in diverse ways, yet microbial contribution to plant volatile phenotype remai

117 c flow-through approach will allow efficient microbial conversion of carbon-containing bioconvertible

118 p plants and non-crop plants with associated microbial culture collections and reference genomes, (2)

119 Using directed microbial culture techniques, we discovered Clostridium

120 n of 1,2-dichloroethane (1,2-DCA) using five microbial cultures.

121 ery approaches have begun to illuminate this microbial "dark matter," which will in turn allow detail

122 compositional and high-dimensional nature of microbial data, statistical inference cannot offer relia

123 poses immense stores of frozen carbon (C) to microbial decomposition.

124 rring in the dry season was due to nighttime microbial degradation, with considerable additional cont

125 findings provide a novel mechanism by which microbial-derived butyrate promotes barrier through IL-1

126 first demonstrated for direct and label-free microbial detection.

127 Blood cultures remain the standard test for microbial diagnosis, with directed serological testing (

128 These results illustrate the importance of microbial dispersal to animal microbiomes and motivate i

129 e 11 PFS-associated pathways correlated with microbial diversity and individual genus, with species a

130 Microbial diversity in the gut ensures robustness of the

131 e metabolism of carbohydrate polymers drives microbial diversity in the human gut microbiota.

132 Microbial diversity measures did not differ between food

133 ent studies have shown exhibit not only high microbial diversity, but also high arthropod diversity.

134 ive strain-level genetic overview of the gut microbial diversity.

135 ature infant microbiome can exhibit very low microbial diversity.

136 t reports have described both vertebrate and microbial DNA glycosylases capable of unhooking highly t

137 For example, viral or microbial DNA triggers cell-intrinsic immune responses t

138 acterial endotoxin, respiratory viruses, and microbial DNA.

139 uiescent parasites, but pathways involved in microbial dormancy, maintenance of genome integrity and

140 Microbial-driven expression of IL-19 by intestinal macro

141 Here we review reports of microbial dysbiosis in ASD.

142 mechanisms behind causes and consequences of microbial dysbiosis in CVID.

143 ggests that therapies that induce or correct microbial dysbiosis may affect the excitability of prima

144 ggests that therapies that induce or correct microbial dysbiosis may impact visceral pain.SIGNIFICANC

145 quantitative index of murine Giardia-induced microbial dysbiosis.

146 of Crohn's disease (CD) involves immune and microbial dysregulation, induced by environmental factor

147 degradation coupled with bioavailability and microbial ecology are rarely documented.

148 Here, we provide a modern synthesis of the microbial ecology of mountain glacier ecosystems, and pa

149 Compositional and functional changes of this microbial ecosystem are correlated with a variety of hum

150 echanisms by which they are depolymerized in microbial ecosystems.

151 ensity was kept at 11.0 +/- 1.3 mA/m(2) in a microbial electrochemical cell, and isotopic experiments

152 y and potentially expands the application of microbial electrochemical technologies.

153 When a mixed-culture microbial electrolysis cell (MEC) is fed with a fermenta

154 We assembled thirteen draft genomes from a microbial electrosynthesis system producing primarily ac

155 CRISPR-Cas systems have potential for many microbial engineering applications, including bacterial

156 ple inputs-sex, age, nutritional status, and microbial environment-which function in the modulation o

157 or by the combined action of endogenous and microbial enzymes when fermented.

158 ooperative activity of a large repertoire of microbial enzymes.

159 Defining the microbial etiology of culture-negative prosthetic joint

160 duce the PhILR transform, which incorporates microbial evolutionary models with the isometric log-rat

161 ecies, a list likely to grow as knowledge of microbial expansin function deepens.

162 Here, we combine insights from recent microbial experiments with concepts from lattice-field t

163 The abundance and diversity of microbial exposures during the first months and years of

164 Thus, understanding the water relations of microbial extremophiles is imperative to our ability to

165 Microbial factories have been engineered to produce lipi

166 ggests that their differentiation depends on microbial factors.

167 in infection over a 7-day period and reduced microbial fitness after exposure to heat shock.

168 Microbial fuel cells (MFCs) are novel bio-electrochemica

169 ed-species bioelectrochemical reactors, like microbial fuel cells (MFCs), make accurate predictions o

170 ave a clear advantage over more conventional microbial fuel cells which require the input of organic

171 iotechnologies that operate at the limits of microbial function.

172 ignificant associations were identified with microbial function; 13 pathways including branched chain

173 rectale and Prevotella copri) or continuous microbial genetic variations (e.g., for Faecalibacterium

174 s (10.2x depth of coverage)-the oldest draft microbial genome generated to date, at around 48,000 yea

175 istically rigorous approach to extract novel microbial genomes while preserving single-cell resolutio

176 The Integrated Microbial Genomes with Microbiome Samples system contain

177 res to accommodate the needs of larger-scale microbial genomics analysis, while expanding GI predicti

178 nnotations will promote advances in clinical microbial genomics, functional evolution and other subfi

179 with only a subset of strains within causal microbial groups.

180 w (%w = weight percent) completely inhibited microbial growth (from 1.4 x 10(7) to 0 CFU/mL) and hind

181 seemingly unaltered or showed even enhanced microbial growth or symptom formation in the mlo2 mlo6 m

182 g vacuoles (PVs) as intracellular niches for microbial growth.

183 mount of essential oil needed to inhibit the microbial growth.

184 e of water activity, which slightly favoured microbial growth.

185 most natural habitats is low enough to limit microbial growth.

186 hich require the input of organic carbon for microbial growth.

187 s of GWAS, the current state of the field of microbial GWAS, and how lessons from human GWAS can dire

188 ds indicate potential particle, chemical and microbial hazards.

189 Mud and sand content and the presence of microbial heterotrophic and nitrifying communities parti

190 Microbial hosts are predicted for 20 000 viral sequences

191 d the feasibility of sequencing analysis and microbial identification aboard the ISS.

192 16S rRNA sequence plays an important role in microbial identification.

193 ecognition of the complexity of the genetic, microbial, immune, and environmental factors that affect

194 idated, using literature data for enzyme and microbial inactivation over a wide range of temperature

195 During microbial infection, responding CD8(+) T lymphocytes dif

196 kin microbial interactions versus pathogenic microbial interactions in wound repair is important.

197 Thus, the interplay between normal skin microbial interactions versus pathogenic microbial inter

198 dietary polysaccharide digestion, including microbial interactions with endogenous host glycans and

199 of clinical strategies relevant for targeted microbial intervention.

200 s dust as compared to nasal samples suggests microbial involvement beyond mere colonization of the up

201 e maximum sorption capacity is influenced by microbial Kingdoms, the type of biosorbent (whether cons

202 of life hypotheses as well as the search for microbial life on the icy moons of Jupiter and Saturn.

203 ortance of community dynamics for supporting microbial life through either carbon fixation, and/or mo

204 d increases in global temperatures and which microbial lineages will be most impacted.

205 Here we provide a global estimate of microbial loads and air-sea exchanges over the tropical

206 nic (NH) conditions and the human originated microbial loads of these products were determined.

207 Generally, RF caused an increase of microbial loads to values >/=6.0logCFU/mL after 7days of

208 This suggests a more complex microbial management role of the innate immune system fo

209 Microbial mats fuelled by oxygenic photosynthesis were p

210 The role of archaea in microbial mats is poorly understood.

211 such as butyrate, produced through anaerobic microbial metabolism represent a major energy source for

212 ulators of soil carbon persistence, shifting microbial metabolism to less efficient anaerobic respira

213 of microbial communities as well as shift of microbial metabolites were driven by biogeographic locat

214 asma phase-II metabolites as well as altered microbial metabolites.

215 y aims to understand the relationships among microbial metal resistance, biodiversity, and metal sorp

216 s mercury (Hg) redox reactions and anaerobic microbial methylation in the environment.

217 The microbial mixed culture RM grows with dichloromethane (D

218 dy provides a simple modification to improve microbial models for inclusion in Earth System Models.

219 port the consideration of nutritional and/or microbial modification in this population.

220 LRs) are innate immune receptors for sensing microbial molecules and damage-associated molecular patt

221 Nutrient cross-feeding can stabilize microbial mutualisms, including those important for carb

222 rforms existing models in terms of accuracy, microbial network recovery rate, and reproducibility.

223 Microbial nitrogen transformation processes such as deni

224 Microbial opsin-based optogenetic tools have been transf

225 interactions extends beyond toxicity to the microbial partners.

226 E can also act as an innate immune sensor of microbial pathogen-associated molecular pattern molecule

227 Microbial pathogens are exposed to damaging reactive oxy

228 otal role in immune evasion by certain other microbial pathogens by driving the differentiation of re

229 involved in plant defense machinery against microbial pathogens in Arabidopsis thaliana.

230 h-throughput search for compounds that prime microbial pattern-induced secretion of antimicrobial fur

231 Additionally, we aimed to identify microbial patterns associated with the onset of eczema.

232 leles were predicted to bind these self- and microbial peptides strongly, and these responses were mo

233 d for 20 000 viral sequences, revealing nine microbial phyla previously unreported to be infected by

234 Although it has been critical for decades in microbial physiology to characterize individual strains,

235 Defining the microbial players involved in crop rotational effects in

236 ndogenous host glycans and the importance of microbial polysaccharides.

237 ory attributes, biochemical characteristics, microbial population and flavour profile during storage.

238 ropose that demographic range expansion of a microbial population capable of horizontal gene exchange

239 Investigation of the microbial population identified distinct bacterial popul

240 teracting with a dense and extremely diverse microbial population.

241 gnificantly changed the structure of aquatic microbial populations.

242 nhanced decomposition more than AM trees via microbial priming of unprotected SOM.

243 We propose a novel framework called Microbial Prior Lasso (MPLasso) which integrates graph l

244 presence of another could inform industrial microbial processes; and the analysis of bacterial biofi

245 ioeconomy requires efficient and sustainable microbial production of chemicals and fuels.

246 of Erdr1 depends on detection of circulating microbial products by Toll-like receptors on T cells, an

247 In the absence of microbial products, the transcription factor interferon

248 acellular and extracellular environments for microbial products.

249 ignals in innate immune cells in response to microbial products.

250 iotechnological applications, and beyond the microbial realm.Cooperative behaviour among individuals

251 ugars (AS) could reflect the contribution of microbial residues to soil N transformation.

252 ld Federation for Culture Collections (WFCC)-Microbial Resource Center (MIRCEN).

253 ailable organic carbon that fueled anaerobic microbial respiration and stabilized U(IV).

254 Ecosystem carbon losses from soil microbial respiration are a key component of global carb

255 f dissolved organic carbon (DOC) impacts the microbial respiration of DOC to CO2.

256 d soil shrinkage or indirectly by decreasing microbial respiration rates due to lower redox levels in

257 the endogenous rate of aerobic or anaerobic microbial respiratory activity.

258 l community dynamics is necessary to predict microbial response to perturbation.

259 Moreover, plant and microbial responses to subsequent drought were dependent

260 d that plants in the growth system support a microbial rhizosphere effect.

261 Peri-implant submucosal microbial samples were collected from 85 patients with p

262 gens) to the biological or medical status of microbial samples.

263 ies of many multicellular systems, including microbial self-organization in biofilms, embryogenesis,

264 In addition to their role as microbial sensors, recent evidence indicates that nucleo

265 On the microbial side, we found that P. palmivora encodes an ac

266 ccepted origin of angiosperms, suggests that microbial sources of these lipids may also exist.

267 to recover 227 high-quality genomes from 150 microbial species affiliated with 46 different phylum-le

268 Microbial species often exist in complex communities whe

269 cant increase in transcript production among microbial species that are specialized on direct N2O red

270 cal and systemic immunity by providing tonic microbial stimulation that can functionally replace inte

271 When exposed to microbial stimuli, DCs activated nuclear factor (NF)-kap

272 However, microbial strain typing allows zoonotic pathogens to be

273 ar disease and healthy controls, identifying microbial strains and functions associated with the dise

274 ing these enzymes allows the construction of microbial strains that produce either chiral 2-methyl-3-

275 mechanisms to destroy these physically large microbial structures.

276 dhesins, including proteins belonging to the microbial surface components recognizing adhesive matrix

277 validated 3D active fluid model, describing microbial suspension flows that spontaneously break mirr

278 ensable for the rational design of plant and microbial systems for the production of industrially val

279 However, application to microbial systems is rare.

280 rrence and time series data, particularly in microbial systems.

281 Infestation with WCR affected specific microbial taxa (Acinetobacter, Smaragdicoccus, Aeromicro

282 However, specific microbial taxa are associated with colonization of this

283 ory mediators, and proportions of individual microbial taxa during OH abstention.

284 ght polymers revealed a large core of shared microbial taxa, predominantly composed of microorganisms

285 Prior work on gut microbial time series has largely focused on autoregress

286 owever, we show that most of the variance in microbial time series is non-autoregressive.

287 and are likely mediated by dispersal-related microbial traits.

288 aches from tea shoots, chemical synthesis to microbial transformation have been tried to meet its dem

289 Our study indicated that DW altered microbial transformation of added-N, and the effect was

290 S. stercoralis infection is characterized by microbial translocation and accompanying increases in le

291 n through persistent monocyte activation and microbial translocation appear to be important in IRIS p

292 ed subjects had higher immune activation and microbial translocation biomarkers than uninfected volun

293 nflammation and provide data to suggest that microbial translocation is a feature of asymptomatic S.

294 tercoralis infection, the elevated levels of microbial translocation markers, acute-phase proteins, a

295 aque model of HIV to examine enteropathy and microbial translocation.

296 es in circulating metabolites, including gut microbial, tryptophan, plant component, and gamma-glutam

297 Microbial water quality monitoring is crucial for managi

298 assess the annual financial requirements for microbial water testing at both national and regional le

299 research into evolutionary processes in the microbial world.

300 rom human interactions with pathogens in the microbial world.