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1 hylated or unmethylated probes and HeLa cell nuclear extract.
2 sites but blocked U2 snRNP assembly in HeLa nuclear extract.
3 bind and compete for HIF with hypoxic Hep3B nuclear extract.
4 RN protein, compared with BLM, from the HeLa nuclear extract.
5 ombined plasmid, repair oligonucleotide, and nuclear extract.
6 chromatin, we fractionated a mammalian cell nuclear extract.
7 n PADT, we developed a PADT assay using HeLa nuclear extract.
8 ulated by a THZ1-sensitive factor present in nuclear extract.
9 ll line nuclear extract and regressing-tumor nuclear extract.
10 nd a partially purified fraction from a HeLa nuclear extract.
11 ndonuclease 1 (APE1) within few nanograms of nuclear extract.
12 stably paused polymerases in the presence of nuclear extract.
13 ET and CYC from the female mosquito fat body nuclear extract.
14 proximal pausing to DSIF-depleted Drosophila nuclear extracts.
15 processing of histone pre-mRNA in mammalian nuclear extracts.
16 stone H2A acetylation activity in Drosophila nuclear extracts.
17 not inhibit (CAG)(n) hairpin repair in HeLa nuclear extracts.
18 nce of TFs in glaucomatous than in normal TM nuclear extracts.
19 K8beta pre-mRNAs in vitro in the presence of nuclear extracts.
20 SN)-BER, was observed with mitochondrial and nuclear extracts.
21 nd highly purified protein was prepared from nuclear extracts.
22 OA-treated or cycloheximide-treated HBC cell nuclear extracts.
23 essing by altering the sumoylation status of nuclear extracts.
24 n purify DNA methyltransferase activity from nuclear extracts.
25 tion of p53 proteins with antibody to Sp1 in nuclear extracts.
26 g by proteins of the Jun and Fos families in nuclear extracts.
27 sically associates with cohesin in HeLa-cell nuclear extracts.
28 MAL1 throughout the circadian cycle in liver nuclear extracts.
29 pendent, HJ branch migrator present in human nuclear extracts.
30 use IgM gene to support RNA splicing in HeLa nuclear extracts.
31 ic binding of a consensus probe for c-Myc to nuclear extracts.
32 ver nuclear extracts relative to adult liver nuclear extracts.
33 pair (NER) was examined using Xenopus oocyte nuclear extracts.
34 ite stable, remaining on the DNA template in nuclear extracts.
35 se tissues compared with their corresponding nuclear extracts.
36 genous p68 and p53 co-immunoprecipitate from nuclear extracts.
37 ed to perform in vitro transcription in HeLa nuclear extracts.
38 dative damages on transcription in HeLa cell nuclear extracts.
39 teins that are stably associated with WRN in nuclear extracts.
40 ty to the labeled repressor element in hPTEC nuclear extracts.
41 lity shift assays (EMSAs) with Jurkat T-cell nuclear extracts.
42 ach to identify H1-binding proteins in human nuclear extracts.
43 e removed from Pol II by a factor present in nuclear extracts.
44 and purified DNMT enzymatic activities from nuclear extracts.
45 ome DNA repair and replication proteins from nuclear extracts.
46 her strand causes RNAPII arrest in HeLa cell nuclear extracts.
47 vitro processing efficiency of highly active nuclear extracts.
48 eased histone acetyl transferase activity in nuclear extracts.
49 that co-purify with TDP-43 from rodent brain nuclear extracts.
50 ssociates with a CtBP corepressor complex in nuclear extracts.
51 n FLAP promoter as demonstrated by EMSA with nuclear extracts.
52 NA methyltransferase (DNMT) within embryonic nuclear extracts; (2) uptake of TDCIPP from 0.75 h postf
53 ift assays (EMSAs) we have now identified in nuclear extracts a functional repressor cis element, (T/
54 ubation with a reassembly mixture containing nuclear extract also encapsidated a reporter plasmid.
55 ed retardation of repair of the AP site with nuclear extract and an elevated mutation frequency after
59 the EJC core component eIF4A3 from HeLa cell nuclear extract and found that eIF4A3 is dispensable for
62 loped an in vitro assay using mammalian cell nuclear extract and plasmid DNA containing bulky adducts
63 The ENE inhibits deadenylation and decay in nuclear extract and prevents deadenylation of naked RNA
65 n vitro polyadenylation assay with HeLa cell nuclear extract and recombinant Hu proteins, we have sho
66 footprint analysis by the walleye cell line nuclear extract and regressing-tumor nuclear extract.
68 phorylation at Thr(359)/Ser(363) in cellular/nuclear extracts and co-immunoprecipitation with cellula
69 ontribution of MHEJ to DNA end joining using nuclear extracts and DNA substrates containing 10-bp rep
71 etinoid X receptor (RXR) heterodimer in HeLa nuclear extracts and identified its polypeptide componen
72 ified Mip40-containing complexes from testis nuclear extracts and identified tMAC, a new testis-speci
73 5 inhibits the splicing of mRNA in cell-free nuclear extracts and in a cell-based dual-reporter mRNA
75 ycT1:CDK9/P-TEFb and Tat:P-TEFb complexes in nuclear extracts and interacts with recombinant Tat:P-TE
76 repair experiments employing Xenopus oocyte nuclear extracts and lesion-containing DNA substrates de
77 ed by a significant increase of NF-kappaB in nuclear extracts and phosphorylated p38 MAPK in cell lys
81 ers of ATF4, we applied ROS17/2.8 osteoblast nuclear extracts and purified recombinant His-ATF4 onto
84 hat Oct4 interacts with H3K56ac in mouse ESC nuclear extracts and that perturbing H3K56 acetylation d
85 taining and PARP cleavage (immunoblotting of nuclear extracts) and cardiac function by transthoracic
87 using either in vitro translated proteins or nuclear extract, and by in vivo chromatin immunoprecipit
88 with recombinant VDR/RXRalpha and with JEG-3 nuclear extract, and was verified in living JEG-3 cells
89 s with U5snRNP proteins and tri-snRNP110K in nuclear extracts, and facilitates recognition of an alte
90 n an approximately 670-kD protein complex in nuclear extracts, and physically interacts with other kn
91 hatidylinositol 3-kinase (PI3-K) subunits in nuclear extracts, and that the p110 subunit of PI3-K dir
92 P sites with a vicinal 8-oxoG form DSBs with nuclear extract, as confirmed in vivo by transformation
94 ds and 5' Okazaki-fragment ends or, in human nuclear extracts, at nicks in exogenous circular substra
96 the activity of H3K4 demethylases in Beas-2B nuclear extracts because ambient oxygen tensions were re
98 noblotting to identify at least 17 CoRs from nuclear extracts bound to 17beta-estradiol (E2)-liganded
99 omoter bound NFAT proteins derived from IMCD nuclear extracts, but they selectively bound different N
100 kappaB DNA binding activity was evaluated in nuclear extracts by electrophoretic mobility shift assay
103 iased affinity chromatography screen of HeLa nuclear extracts by using either mock-treated or ERK2-ph
104 nsis-infected host cells and was detected in nuclear extracts by Western immunoblotting with TRP120-s
105 S]) have low levels of NF-kappaB activity in nuclear extracts comparable with normal marrow, while pa
106 evels were minimal in DEX-treated macrophage nuclear extracts, compared with those from GM-CSF-treate
110 4 and increase in phospho-Smad2 in the liver nuclear extract correlated with elevated miR-181b/d in m
111 ity shift assays (EMSA) using bovine retinal nuclear extract demonstrate that RA response elements (R
113 alysis of ACF immunopurified from hepatocyte nuclear extracts demonstrated phosphorylation of serine
114 evious studies of exon IIIc splicing in HeLa nuclear extracts demonstrated that this guanine branchsi
116 e results were consistent with the fact that nuclear extracts derived from a limited number of AD pat
118 eLa cells, we show that hCDK13 purified from nuclear extracts displays CTD kinase activity in vitro,
119 tion sequence that eliminate Elba binding in nuclear extracts disrupt the early boundary activity of
122 is, addition of arachidonic acid to isolated nuclear extracts enhanced the binding of PPARdelta to DR
123 lement (ERE)-DNA pull-down assays using HeLa nuclear extracts followed by mass spectrometry-immunoblo
124 NPK and XRN2 from intact and RNase A-treated nuclear extracts followed by shotgun mass spectrometry r
126 Using a cell-free transcription system with nuclear extract from 3T3-L1 preadipocytes and rC/EBPbeta
135 e-strand telomeric DNA binding activities in nuclear extracts from B. oleracea, partial purification
137 ctrophoretic mobility supershift assays with nuclear extracts from beta-cell lines and mouse islets,
140 he Galpha(i2) gene promoter was decreased in nuclear extracts from cells pretreated with antioxidants
142 etic mobility shift assays demonstrated that nuclear extracts from CHX-treated and CHX + TCDD cotreat
148 zed and the repair investigated using either nuclear extracts from hamster cells proficient (AA8) or
153 KCS protein binding activity (KBP) by using nuclear extracts from HeLa cells not treated with IFN.
154 clear GR and GR-DNA binding were measured in nuclear extracts from hippocampus, hypothalamus, prefron
156 ding to the cognate sequence was enriched in nuclear extracts from hypoxic but not normoxic RAW 264.7
157 evealed induction of DNA binding activity in nuclear extracts from hypoxic RAW cells, with supershift
159 The results of RNA affinity analysis with nuclear extracts from intact liver demonstrated that the
160 transillumination of protein gels containing nuclear extracts from K3-treated cells revealed a promin
162 he ability to bind NF-kappaB proteins within nuclear extracts from lipopolysaccharide (LPS)-induced m
163 t can be adapted to study mismatch repair in nuclear extracts from mismatch repair proficient and def
164 Electrophoretic mobility shift assays using nuclear extracts from MLE-15 murine Clara cell-derived m
168 NA binding complex by supershift analysis of nuclear extracts from oxysterol-treated, cultured kerati
169 trate stage-specific demethylase activity in nuclear extracts from primary chicken erythroid cells th
170 ys using both purified proteins and isolated nuclear extracts from primary human fibroblasts and 293T
172 I footprint analysis on the HPV16 URR using nuclear extracts from TGF-beta-sensitive HPV16-immortali
174 thylation at Arg3, are readily acetylated by nuclear extracts from the same cells, if and only if the
175 d that DNA occupancy of NF-kappaB present in nuclear extracts from tumour necrosis factor alpha (TNFa
176 d by Western blots comparing Dlgh1 levels in nuclear extracts from wild type and Cx32 null murine liv
180 ofiles of ARTD1 (PARP1) and ARTD2 (PARP2) in nuclear extracts highlighted the semi-complementary, yet
182 rinting and gel-shift assays with human lung nuclear extract identified two DNA elements bound by C/E
187 tor in complex media (e.g., 250 mug/mL crude nuclear extracts) in a convenient, low-reagent process r
188 ic mobility shift assays using mouse retinal nuclear extracts, in combination with specific antibodie
189 within large complexes present in HeLa cell nuclear extracts, in which the hyperphosphorylated form
190 ibody to PRPF40A precipitated U2 snRNPs from nuclear extracts, indicating that PRPF40A associates wit
191 h these findings, the depletion of CDK9 from nuclear extracts inhibited Tax transactivation in vitro.
192 Depletion of the SMN complex proteins from nuclear extracts inhibits formation of the E complex and
193 alyses, we observed that, in the presence of nuclear extract, intact VLPs partially disassemble, prov
194 eriments indicated that Ref-1/Ape present in nuclear extract interacted with HIF-1 and p300 but not A
196 DNA binding activity present in A. thaliana nuclear extracts is not dependent on POT1a or POT1b prot
198 set of SNORDs, including SNORD27, in soluble nuclear extract made under native conditions, where fibr
200 propriately, Drosophila dCDK12 purified from nuclear extracts manifests CTD kinase activity in vitro.
204 ncoded transcription factor E47 are lower in nuclear extracts of activated splenic B cells from old m
206 gh NF-kappaB activity increased in the liver nuclear extracts of both genotypes after DEN exposure, t
208 etic mobility shift assays demonstrated that nuclear extracts of cells overexpressing E2F1 bound dire
210 d stage-specific demethylase activity in the nuclear extracts of chicken red cells; activity in 5-, 8
213 -kDa silencer-binding protein (SBP) from the nuclear extracts of human breast cells BT-549 and MDA-MB
217 demonstrated increased NFAT-DNA binding from nuclear extracts of lipopolysaccharide (LPS) stimulated
219 man insulin from standard solutions and from nuclear extracts of pancreatic cells with high selectivi
221 NF-4 serum caused a supershift not only with nuclear extracts of scN-adapted insect midgut but with t
225 at the NF-kappaB subunit p50 predominated in nuclear extracts of whole cecal tissue and of isolated c
227 we reported that fractionation of HeLa cell nuclear extracts on glycerol gradients revealed an endog
230 not inhibit histone deacetylase activity in nuclear extracts or reactivate the expression of the den
231 repair system and that depletion of RFX from nuclear extracts or RFX knockdown in cells reduces misma
232 gnition site, unless it is preincubated with nuclear extracts precleared by anti-Pax-6 but not by ant
233 region of the WDSV long terminal repeat with nuclear extract prepared from a walleye cell line reveal
235 etic mobility shift assay (EMSA) analysis of nuclear extracts prepared from ultraviolet B (UVB)- and
236 ERT promoter DNA-protein complexes formed in nuclear extracts prepared only from lung cancer cells bu
237 Moreover, alkaline phosphatase treatment of nuclear extracts reduced the amount of APOBEC-1 co-immun
238 assays was low in embryonic day (E) 19 liver nuclear extracts relative to adult liver nuclear extract
240 wn spiked and endogenous LSD1 from HeLa cell nuclear extracts, setting the stage for activity-based d
242 plasts and Western blotting and MALDI-TOF of nuclear extracts show that Avp triggers Avpr1alpha local
244 Gel shift assays using transfected myoblast nuclear extracts showed that ectopic p107 reduced Sp1 oc
245 This complex was isolated from HeLa cell nuclear extracts stably expressing LANA and was verified
246 ain homogenates and separate cytoplasmic and nuclear extracts suggesting nuclear ErbB-back-signaling
247 chondrial extract, but not with cytosolic or nuclear extract, suggesting that cleavage of APE1 by a s
248 o-immunoprecipitated from the bovine retinal nuclear extract, suggesting their existence in a multi-p
249 ing HO-1 immunoreactive band was enriched in nuclear extracts, suggesting that HO-1 was cleaved to al
250 ous PIAS1 and TBP co-immunoprecipitated from nuclear extracts, suggesting the interaction occurred in
251 d lack of DNA binding activity in macrophage nuclear extracts suggests that the NF-kappaB site is non
253 tivity is required for elongation in a crude nuclear extract system, whereas in a purified system dev
254 ltered binding of regulatory proteins in all nuclear extracts tested, and -1002 T > G resulted in low
256 ator is essential for basal transcription in nuclear extracts that contain a more physiological compl
257 inds a protein present in neuronal precursor nuclear extracts that express very low levels of reelin
259 icroscopy and by immunodetection in purified nuclear extracts that the ankyrin repeat-containing prot
260 an in vitro transcription system, using HeLa nuclear extract, that supports not only efficient splici
262 asal transcription and pol II recruitment in nuclear extract, thus indicating a conditional restricti
263 tein deacetylase enzymes present in the HeLa nuclear extracts, thus making it potentially suitable no
264 d as bait for factors present in BCBL-1 cell nuclear extract to show that PAN RNA interacts with seve
265 in hypoxic pulmonary artery endothelial cell nuclear extract to the WT sequence failed to alter seque
266 s-like particles (VLPs), were incubated with nuclear extracts to provide access to the range of cellu
267 ibody in the Western blotting of mouse liver nuclear extracts to show that PXR is accumulated in the
268 , L, and A2/B1 from both HeLa and hepatocyte nuclear extracts to the element further supports its act
269 recipitation and rate-zonal sedimentation of nuclear extracts together with double immunostaining of
275 ing complex when using adult skeletal muscle nuclear extract was used but not when nuclear extracts f
277 ncreasing the concentration of actin in HeLa nuclear extracts was able to suppress overall HDAC funct
280 measurements of DNA-protein interactions in nuclear extracts, we elucidate the dual functions of PER
281 ng PI(3,4,5)P(3) column and NGF-treated PC12 nuclear extracts, we identified B23 as a nuclear PI(3,4,
283 ll-free apoptotic assay and NGF-treated PC12 nuclear extracts, we purified Ebp1 as a factor, which co
284 old) changes in the ratio of DNA template to nuclear extract were sufficient to change Pol II-mediate
285 zed by Western blot for HO-1, and HSP-70 and nuclear extracts were analyzed by DNA mobility shift ass
287 in binding to DNA in diabetic versus control nuclear extracts were observed with electrophoretic mobi
288 ectrophoretic mobility shift assays with 3T3 nuclear extracts were used to study the PR1C core promot
290 cantly, phosphorylated ACF was restricted to nuclear extracts where it co-sedimented with 27S editing
291 urther confirmed by Western blot analysis of nuclear extracts wherein levels of RelA, the p65 compone
292 s were readily detected in the infected cell nuclear extracts which were significantly reduced by ERK
293 lso presented for generating cytoplasmic and nuclear extracts, which extends use of this protocol to
294 ays show that Pin1 inhibits transcription in nuclear extract, while an inactive Pin1 mutant in fact s
298 ch inhibits ATR immunoprecipitated from HeLa nuclear extracts with an IC50 of 5 nM and ATR mediated p
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