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1 angle DNA bend in the presence or absence of octopine.
2 tter mutations interfered with activation by octopine.
3 at is transcriptionally induced by the opine octopine.
4 occQ promoter in the presence and absence of octopine.
5 activate the occQ promoter in the absence of octopine.
6 ron required for the catabolism of the opine octopine.
7 e Ti plasmid and to be directly inducible by octopine.
8 nes that direct the uptake and catabolism of octopine.
9 a tumor-released arginine derivative called octopine.
10 autorepressor in the presence or absence of octopine.
11 dependent upon induction of the tra genes by octopine.
14 ntrol of the occ genes occurs in response to octopine, a nutrient released from crown gall tumors.
15 ntrol of the occ genes occurs in response to octopine, a nutrient released from crown gall tumors.
16 occQ and occR in the presence or absence of octopine, although octopine triggers a conformational ch
17 lasmids is stimulated by OccR in response to octopine, an opine released from crown gall tumours, and
19 tly inducible by proline, while induction by octopine and by arginine (and probably by ornithine) req
20 d in differences in host specificity between octopine and nopaline strains of Agrobacterium, with the
21 A microarrays, representing all genes of the octopine- and nopaline-type Ti plasmids, to identify all
22 rnithine and a third group could not utilize octopine, arginine, ornithine, or proline as a carbon so
24 ed all the genes required for utilization of octopine as a source of carbon, nitrogen, and energy.
25 vated promoter lies just downstream from the octopine catabolic genes, and transcribes six genes in a
26 11 other opines were tested for induction of octopine catabolic operon and all were able to do so.
27 um tumefaciens that positively regulates the octopine catabolism operon of the Ti plasmid and is also
35 t of these mutant proteins in the absence of octopine displayed DNA binding and bending properties ch
43 overed a second traR-like gene, trlR, on the octopine-mannityl opine-type Ti plasmids pTi15955 and pT
45 contains the 14-kb BamHI fragment 4 from the octopine/mannityl opine-type Ti plasmid pTi15955, grew w
46 icient to cause constitutive activation, and octopine must cause at least one additional conformation
47 nducible by arginine, while it is induced by octopine only in strains that can convert octopine to ar
51 s, material sheared from the cell surface of octopine strain A348 was seen to possess detectable leve
52 actors is VirF, an F-box protein produced by octopine strains of Agrobacterium, which presumably faci
55 he superpromoter consists of a trimer of the octopine synthase transcriptional activating element aff
56 3 proteins encoded by three Ti plasmids, the octopine Ti plasmid pTiA6NC, the supervirulent plasmid p
58 hey are (i) octopine oxidase, which converts octopine to arginine and pyruvate and is encoded by the
61 he presence or absence of octopine, although octopine triggers a conformational change that shortens
64 ocus, which was previously identified on the octopine-type Ti plasmid but thought to be absent from t
65 robacterium tumefaciens strains harboring an octopine-type Ti plasmid exhibit a similar activity whic
66 -F, -G, -H, and -I of the trb region of the octopine-type Ti plasmid pTi15955 and of the tra2 core r
67 ted to the repA, repB, and repC genes of the octopine-type Ti plasmid pTiB6S3 as well as to other rep
69 ow that TraR increases the copy number of an octopine-type Ti plasmid up to eightfold and that TraR a
72 of Agrobacterium tumefaciens wide-host-range octopine-type Ti plasmids is regulated by the LuxR-type
78 ere, we show that a protein with homology to octopine VirF is encoded by the Ti plasmid of the nopali
79 ings colonized by the bacteria also produced octopine, which was detected using a Pocc-gfp reporter s
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