ライフサイエンスコーパス: package

1 ment compliance aids and original medication packaging).

2 led and analyzed using a commercial software package.

3 and OA and was supported by a brief training package.

4 porated into our open-source ALFRED software package.

5 ailable as part of the RNAstructure software package.

6 ary and other dependencies in one convenient package.

7 in R and will be available an a Bioconductor package.

8 sal health coverage with a generous benefits package.

9 interface to the Rosetta molecular modeling package.

10 tes all the post-alignment steps in a single package.

11 platform application and open source Python package.

12 rovided as part of the RNAstructure software package.

13 patibility and user accessibility to the new package.

14 d using a qualitative data analysis software package.

15 hymena chromosomes are normally most densely packaged.

16 tandard molecular dynamics and cell-modeling packages.

17 olecular dynamics and Monte Carlo simulation packages.

18 untries developing universal health coverage packages.

19 lying on dozens, if not hundreds of software packages.

20 ystem compatible with adeno-associated viral packaging.

21 plex chemical composition while still in its packaging.

22 at both initiation and completion of genome packaging.

23 nce in the monitoring of modified atmosphere packaging.

24 ce free DNA ends, such as DNA replication or packaging.

25 d medication was identical in appearance and packaging.

26 were observed (1385 from original medication packaging, 1067 from multi-compartment compliance aids).

27 rs & GWCoGAPS are in the CoGAPS Bioconductor package (3.5) under the GPL license.

28 apy for the normal organs with the dosimetry package 3D-RD.

29 Legs were chopped, modified atmosphere packaged (70%O2/30%CO2) and maintained under retail cond

30 We developed the IsotopicLabelling R package, a tool able to extract and analyze isotopic pat

31 This package aims to improve the quality of phylogenetic tree

32 ser interface (GUI) is also included for the package, allowing users to adjust parameters and see the

33 The package allows one to infer parameters using a Bayesian

34 stand-alone and web versions of the MToolBox package, an up-to-date tool to reconstruct and analyze h

35 PandaR is provided as a Bioconductor R Package and is available at bioconductor.org/packages/pa

36 d introduced here is available as a software package and web server (spectrus.sissa.it/spectrus-evo_w

37 We built both an R package and web server to provide ADAGE signature analys

38 spite the difference in the genetic material packaged and the lack of significant sequence similarity

39 l software, enabling modular experimentation packages and automated data pre-analysis.

40 The current consensus in packaging and delivering CpGs in VLP-based vaccines is t

41 re homes (five only used original medication packaging and five used both multi-compartment complianc

42 istration errors between original medication packaging and multi-compartment compliance aids in care

43 Compare the effect of original medication packaging and multi-compartment compliance aids on medic

44 ation error rate between original medication packaging and multi-compartment compliance aids supports

45 .9, p=0.03), and between original medication packaging and multi-compartment compliance aids within c

46 of predicted RNA structures in picornavirus packaging and offers a readily transferable methodology

47 ein assemblies can acquire virus-like genome packaging and protection.

48 Because of its dense packaging and repetitive DNA sequence, heterochromatin i

49 ackage available both as an easy-to-use UNIX package, and as a python module, for integration into pi

50 The RDI method has been implemented as an R package, and is available for download through Bitbucket

51 teins involved in gene silencing, chromosome packaging, and chromosome segregation.

52 A simplified formulation, packaging, and delivery method to treat PSBI in low-reso

53 material, some with a coating of REO (active packaging, AP), and some without REO (non active packagi

54 vall/iFAAM birth cohort and other iFAAM work packages applied these methods.

55 est that these glaucoma progression software packages are insufficient to obtain high interobserver a

56 nstructural proteins, indicating capsids are packaged as cargo into eHAV vesicles via a highly specif

57 ajor fraction of the bulk parasite genome is packaged as transcriptionally permissive euchromatin wit

58 aging of two reporter RNAs; such RNAs can be packaged at >50% of the efficiencies of an HIV-1 near fu

59 rotein IVa2 is presumed to function as a DNA packaging ATPase.

60 This method has been incorporated into an R package available at github.com/ahproctor/LC50.

61 s": a cross platform, pypy compatible python package available both as an easy-to-use UNIX package, a

62 ment preconfigured with hundreds of software packages, available as a downloadable virtual machine or

63 the complete atomic model of the headful DNA-packaging bacteriophage Sf6 at 2.9 A resolution determin

64 We developed an R package Bayes Factor approach for Differential Co-expres

65 imate trends in added sugars in nonalcoholic packaged beverage products available in the United State

66 ed the amounts of added sugars obtained from packaged beverages US households reported buying in 2007

67 een incorporated into the freely available R package BhGLM, providing a useful tool for analyzing mic

68 ave been implemented in a freely available R package BhGLM.

69 Our software package biMM is a computationally efficient implementati

70 We introduce the R package BoolFilter for Partially-Observed Boolean Dynami

71 ggseqlogo is an R package built on the ggplot2 package that aims to addres

72 ls now include the impacts of processing and packaging but are far from comprehensive.

73 572 dividing cells, and developed a software package called ECdetect to conduct unbiased, integrated

74 present an advanced version of the software package: CalQuo (2) .

75 The package can be easily included into bioinformatics pipel

76 The nmrstarlib package can be used as a library for accessing and manip

77 The package can run in different commercial cloud platforms,

78 ive tools in gene therapy, but their limited packaging capacity can be restrictive.

79 matter in conjunction with the Bioconductor package Cardinal for analysis of high-resolution, high-t

80 ted and improved version of the Bioconductor package ChAMP, which can be used to analyze EPIC and 450

81 mponents, such as the wafer level chip scale packages, chip resistors, and light-emitting diodes, can

82 The R package chngpt provides both estimation and hypothesis t

83 By using PLA packaging combination it was possible to maintain an opt

84 The CHAMPION intervention package comprised community health promotion (including

85 aka and the Pazyryks, reveals a common mtDNA package comprised of haplogroups H/H5, U5a, A, D/D4, and

86 ect of REO combined with modified atmosphere packaging conditions (MAP), in our case, aerobic, vacuum

87 colourimetric analyses showed that the best packaging conditions were high-O2 atmosphere in combinat

88 ssification pipeline, using a novel software package: DECARD.

89 iMosflm/MOSFLM is a software package designed to achieve this goal.

90 microneedle, into which BCG powder could be packaged directly.

91 both between and within the nucleosomes that package DNA in chromatin.

92 only resulted in a moderate decrease of RNA packaging efficiencies.

93 The ontologyIndex package enables arbitrary ontologies to be read into R,

94 The Umediation R package enables the user to simulate unmeasured confound

95 ined via a road-map involving selected "food-packaging-environment" system descriptors.

96 This package estimates the isotopic abundance of the employed

97 = 98,256 household-by-quarter observations) packaged food and beverage purchases and SNAP status [cu

98 We developed a C ++ package for analysis of WGS data using GSU.

99 is the same as in the previously published R package for Boolean Networks BoolNet, which enhances com

100 MSMBuilder is a software package for building statistical models of high-dimensio

101 an alternative, we developed metacoder, an R package for easily parsing, manipulating, and graphing p

102 R) is an open-source R/Bioconductor software package for gene set analysis (GSA).

103 ementation of a mixed (single and multi-use) package for intermittent catheterization.

104 sible to any organism, we provide the source package for local use.

105 An R package for performing number and brightness image analy

106 Data version 3.1 and analyzed by Statistical Package for Social Sciences version 20.

107 analysis was performed with the Statistical Package for the Social Sciences (SPSS), version 20.

108 cribe NGSCheckMate, a user-friendly software package for verifying sample identities from FASTQ, BAM

109 es and faster runtime of the IsoEM and IsoDE packages for expression level estimation and differentia

110 e released by most cell types, as biological packages for intercellular communication.

111 s of NMR, the number and variety of software packages for processing and analyzing NMR data is quite

112 the complex quality changes taking place in packaged fresh produce during storage.

113 tion error rates between original medication packaging (from original medication packaging-only care

114 by which a virus enters a cell transform its packaged genome into an active one.

115 ect of these nt-pairings on dimerization and packaging has been documented their effect on authentic

116 post-translational modifications to the DNA packaging histones on the normal genome and the PSR chro

117 The CWDPRNP package, implemented in program R, provides a unified fr

118 The MultiAssayExperiment software package, implemented in R and leveraging Bioconductor so

119 We introduce the caspo toolbox, a python package implementing a workflow for reasoning on logical

120 a reduced preclinical toxicology-assessment package in order to shorten the route to human studies a

121 g that changes associated with the Neolithic package in the Baltic were not driven by the same Anatol

122 The miniaturized HEMT chip is packaged in a polymer substrate and easily integrated wi

123 Neuronal mRNAs can be packaged in reversibly stalled polysome granules before

124 hylene and common woven bags, and maize meal packaged in single and multilayer polyethylene bags was

125 Viability of BCG vaccine packaged in the caves and the mechanical strength of the

126 We identified that miR-195 was packaged in the extracellular vesicles from EC-CM.

127 The TMCT versions of RSV F were packaged in the rHPIV1 particles much more efficiently t

128 , our results suggest that the A3G molecules packaged in the virion first deaminate viral DNA as mono

129 NCP) is the basic structural unit for genome packaging in eukaryotic cells and consists of DNA wound

130 protamines mediate the near crystalline DNA packaging in most vertebrate sperm cells.

131 e and highlighted the critical role of waste packaging in successful sterilization.

132 ains both enzymatic activities necessary for packaging in such viruses: the adenosine triphosphatase

133 RNA secondary structures involved in genome packaging in the picornavirus foot-and-mouth disease vir

134 ructural compaction which may facilitate DNA packaging in vivo.

135 well-established and newer MSM methods, the package includes complementary algorithms for understand

136 random forest implementation included in the package incorporates the correlations between output res

137 ConKit is available via the Python Package Index.

138 specimen stability for use beyond the Aptima package insert specifications for temperature and durati

139 tured fibroblasts, we propose that rRNAs not packaged into complete ribosomal subunits are polyadenyl

140 ion assembly, ensuring that one RNA dimer is packaged into each nascent virion.

141 PolyU RNAs >5000 nt in length are packaged into multiplet capsids, in which a single RNA m

142 Barr virus (EBV)-encoded oncoprotein that is packaged into small extracellular vesicles (EVs) called

143 Unmodified EBOV GP was packaged into the HPIV1 particle, and the TMCT modificat

144 the conundrum that HIV-1 RNA is selectively packaged into virions with high efficiency despite being

145 necessary and sufficient to allow RNA genome packaging into an HIV-1 particle has not been defined.

146 cargos by adaptor proteins, leading to cargo packaging into coated vesicles destined for the endolyso

147 s and transported to the plasma membrane for packaging into progeny virions.

148 the HPIV1 F protein in an effort to enhance packaging into the vector particle and immunogenicity.

149 uently, the TP domain is necessary for pgRNA packaging into viral nucleocapsids and the initiation of

150 The current version of modSaRa package is a comprehensive tool with integration of prep

151 The pulver package is a convenient and rapid tool for screening hug

152 The package is also freely available under the LGPL license

153 This package is available for all commonly used platforms.

154 The package is based on a method previously used in the Unit

155 The package is developed based on a change-point based metho

156 required to establish that a mixed catheter package is equivalent to single use only, particularly f

157 culation, the implementation in the SeqArray package is over 5 times faster than PLINK v1.9 with VCF

158 , installation, and maintenance of all these packages is a burdensome task.

159 Even though a variety of software packages is available for different aspects of the bioin

160 ation of RNAi scaffold design with Qbeta VLP packaging is demonstrated to be target-specific and effi

161 Genome packaging is strongly conserved in the complex double-st

162 directed from the MSC to viral particles for packaging is unknown.

163 software among different supported software packages, mainly focusing on inference accuracy and comp

164 The packaged material within exosomes includes proteins and

165 U.S.) ports of entry as larvae in solid wood packaging material (SWPM).

166 An antioxidant food packaging material was developed and applied to fresh mi

167 ere wrapped in special three-layer sheets of packaging material, some with a coating of REO (active p

168 HY/gamma-CD-IC-NF) were fabricated as a food packaging material.

169 ife of industrial bread and allowing to save packaging material.

170 tential application as an antibacterial food packaging material.

171 The packaged meat was kept at 4 degrees C during 16days and

172 The relevant R package miLineage is publicly available.

173 Here we present a user-friendly R package, modSaRa, designed to perform copy number varian

174 despite its lack of secondary structure, is packaged more efficiently than viral RNA.

175 -Visualization, an extension of the software package MOST (Metabolic Optimization and Simulation Tool

176 WJ) of the pRNA from bacteriophage phi29 DNA packaging motor were examined previously for ocular deli

177 While the packaging motors have been described in some detail, the

178 tion of the proposed method is provided in R package MWLasso.

179 s that specifically target children on their package (n = 747; from 1.9% of foods eligible under Modi

180 aging, AP), and some without REO (non active packaging, NAP), and stored at 4 degrees C for 20days.

181 Contrary to the prevailing model for vRNA packaging, NP does not bind vRNA uniformly in the A/WSN/

182 s (SFPs).We evaluated the effectiveness of a package of health and nutrition interventions on improvi

183 ounseling, the intervention group received a package of health and nutrition interventions that consi

184 ring treatment (P < 0.05).The provision of a package of health and nutrition services in addition to

185 The Basic Package of Health Services (BPHS) program has increased

186 Two interventions that included a package of high-quality clinical care for obesity and li

187 The CHAMPION trial showed that a package of interventions addressing health knowledge and

188 CHAMPION trial was to investigate whether a package of interventions comprising community health pro

189 key findings and present a costed essential package of interventions to reduce risk of and manage CV

190 Here we present an R package of the algorithm with additional functions that

191 c analysis of purified virions suggests that packaging of antirestriction components into P1 virions

192 We propose that IN-RNA interactions allow packaging of both the viral RNA genome and IN within the

193 propose that IN-RNA interactions ensure the packaging of both vRNPs and IN within the protective cap

194 Packaging of DNA into the nucleosome core particle (NCP)

195 anti-viral targets.The mechanism underlying packaging of genomic RNA into viral particles is not wel

196 Selective packaging of HIV-1 genomic RNA (gRNA) requires the prese

197 Packaging of the genome into a protein capsid and its su

198 he mechanism by which Psi promotes selective packaging of the gRNA is not well understood.

199 identified RNA sequences involved in genome packaging of the picornavirus foot-and-mouth disease vir

200 randa et al. (2017) show that production and packaging of the single-copy genome into gametes during

201 gene to the 5' UTR strongly facilitates the packaging of two reporter RNAs; such RNAs can be package

202 g optimized combination of pretreatment with packaging on shelf life of minimally processed cilantro

203 The resulting synthetic nucleocapsids package one full-length RNA genome for every 11 icosahed

204 Two cost-efficient packages, one delivered through schools and one focusing

205 dication packaging (from original medication packaging-only care homes) and multi-compartment complia

206 LesionTracker is a quantitative imaging package optimized for oncology clinical trial workflows.

207 ns, which is independent of either viral RNA packaging or DNA synthesis, multiple substitutions in th

208 , and the TMCT modification did not increase packaging or immunogenicity but rather reduced the stabi

209 Because the majority of software packages originate in academic labs, persistence of the

210 humidity within storage facilities, type of packaging (oxygen-permeable or not), and premix composit

211 We also mapped phage 9 g DNA packaging (pac) site containing two 21-bp direct repeats

212 Package and is available at bioconductor.org/packages/pandaR.

213 were obtained in modified-atmosphere and air-packaged patties.

214 The PCSF package performs fast and user-friendly network analysis

215 QIIME, R package "Phyloseq" analysis was used to assess alpha and

216 acteriophage-like particles that exclusively package pieces of the producing cell's genome and transf

217 association of BRD4 with acetylated histone-packaged promoters and reduces the transcription of proi

218 -immunoprecipitates and colocalizes with AdV packaging proteins.

219 The PDB2CD package provides a web-based, user friendly approach to

220 n with R/Bioconductor packages, the SeqArray package provides users a flexible, feature-rich, high-pe

221 The MultiAssayExperiment Bioconductor package reduces major obstacles to efficient, scalable,

222 However, most of these existing software packages require specific formatted input files and gene

223 Here we describe modifications to the minfi package required to support the HumanMethylationEPIC ('E

224 ily transferable methodology for identifying packaging requirements in many other viruses.IMPORTANCE

225 The package requires no additional software and runs on all

226 We developed an R package rqt, which offers gene-level GWAS meta-analysis.

227 tion occurring around 1:1 stoichiometry with packaged RT.

228 METHODS AND Here, we packaged SaCas9 (clustered regularly interspaced short p

229 The intrinsic amphipathic lipid packaging sensor (ALPS) motif within HOPS Vps41, a targe

230 r approval of these novel drugs and devices, packaged separately or in combination, within the contex

231 ata format implemented in the R/Bioconductor package 'SeqArray' for storing variant calls in an array

232 can occur during manufacturing, processing, packaging, shipment and storage.

233 recommendations emphasise that intervention packages should be applied at developmentally appropriat

234 ence of a cis-acting RNA element called the 'packaging signal' (Psi).

235 Our results indicate that the importance of packaging signals in IAV reassortment is segment depende

236 "cryptic, sequence-degenerate, dispersed RNA packaging signals mapping along the entire viral genome"

237 reference for the segment containing matched packaging signals relative to the background of the viru

238 and N-P) and investigated the use of vector packaging signals.

239 effectiveness of polylactic acid (PLA) based packaging solution to store red fresh meat during its re

240 ctures that might play a role in determining packaging specificity do not survive codon pair recoding

241 genome" play the critical role in poliovirus packaging specificity.

242 ack chemicals during production, processing, packaging, storage, and transport.

243 The combination of the formulation and packaging strategies gave the best result (83% shelf lif

244 R package StructFDR is available from CRAN.

245 improved in version 2.0 to extend PyMOL with packages such as Clustal Omega, PSIPRED and CAMPO.

246 Our package supports Amazon, Google, and Azure clouds, as we

247 With the growth of 3D packaging technology and the development of flexible, tr

248 clustering approach and associated software package that addresses these problems and provides novel

249 seqlogo is an R package built on the ggplot2 package that aims to address this issue.

250 MetaboSignal is an R package that allows merging metabolic and signaling path

251 We have developed geneAttribution, an R package that assigns candidate causal gene(s) to a risk

252 Here we describe Mackinac, a Python package that combines ModelSEED's ability to automatical

253 Umediation is a flexible R package that examines the role of unmeasured confounding

254 Here we introduce a package that is aimed to simplify this process.

255 e Network Expression Simulator in R) is an R package that provides an interface to simulate gene expr

256 des a data preprocessing platform in a small package that requires minimal python dependencies to fun

257 s in silico , we have developed gargammel, a package that simulates ancient DNA fragments given a set

258 computational method and companion software package that supports parameter adjustment and visual in

259 from existing open-source, modular software packages that are regularly updated and commonly used, m

260 nalysis in DCP3 is built around 21 essential packages that were developed in the nine volumes.

261 the capsid coat proteins that is required to package the viral gRNA in its dominant conformation.

262 We then packaged the therapeutic factor IX cassette into haploid

263 uence is evolved de novo that is optimal for packaging the RNA into capsids, while also containing ca

264 methods including the method in the minfi R package, the method by Houseman et al., the Removing unw

265 When used in conjunction with R/Bioconductor packages, the SeqArray package provides users a flexible

266 eloped viruses must protect their genomes by packaging them into an outer shell or capsid of virus-en

267 onenveloped viruses protect their genomes by packaging them into an outer shell or capsid of virus-en

268 metrics, provide a freely available software package to compute them, and demonstrate that identifica

269 -wide association studies by using FarmCPU R package to identify 17 genetic loci associated with cold

270 ctically every stage, ranging from chromatin packaging to mRNA translation.

271 Here, we developed a new method and an R package, to easily infer candidate miRNA-mRNA target int

272 Here, we present an open source R package 'twoddpcr', which uses Poisson statistics to est

273 rough the addition of a rosemary extract and packaging under nitrogen.

274 frame in a foamy virus vector and quantified packaged vector RNA and integrated DNA.

275 In addition to packaging viral pregenomic RNA (pgRNA) and DNA polymeras

276 have revealed important insights into genome packaging, virion assembly, cell entry, and other stages

277 The R package was also used to assess precursor purity of theo

278 e compMS(2)Miner (Comprehensive MS(2) Miner) package was developed in the R language to facilitate ra

279 The intervention package was incorporated into existing SIA activities an

280 Furthermore, LMP1 packaging was severely impaired in CD63 knockout cells,

281 The essential package we describe could be a starting place for low-in

282 cy interventions and health service delivery package we suggest could serve as the cornerstone for th

283 Although we have focussed on the Trinity package, we propose that such clustering is a useful ini

284 examine the role of the gag sequence in RNA packaging, we replaced the 5' gag sequence in the HIV-1

285 The prototype with reduced package weight/volume provides an impressive energy dens

286 s and causal mediation analyses (mediation R package) were then performed in brain regions showing an

287 -1 to achieve such high efficiency of genome packaging when a packageable viral RNA is not required f

288 Here we present three packages which aim to simplify such procedures.

289 Here, we provide the TSIS R package, which is the first tool for detecting significa

290 ompletely refactored version of the RankProd package, which provides a more principled implementation

291 which is very convenient, and the BioNetGen package with extensions for spatial simulation, which is

292 ng an ultrathin, flexible, and imperceptible packaging with conformal epidermal contact.

293 The package, with detailed instructions and examples, is fre

294 ves all types of foods, feed, beverages, and packaging, with the potential for serious health, as wel

295 hod for production of a novel RNAi scaffold, packaged within Qbeta virus-like particles (VLPs).

296 aled marked differences between the proteins packaged within the two types of exosomes from the same

297 GTP binding of K-Ras was dispensable for its packaging within extracellular nanovesicles and for the

298 he burden of use to a patient before a mixed package would be considered.

299 ssionals requested evidence that a multi-use package would not increase the risk of developing a urin

300 e the new algorithms to two popular software packages XCMS and MZmine 2 and present evidence that the