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2 orest had the highest accuracy and correctly phased 86% of the deletions with allele-specific read ev
3 that the local environment of adenosines in phased A-tracts is similar to that of individual A-tract
4 tion of 6MAP into longer duplexes containing phased A-tracts shows that the local environment of aden
5 ed for DNA molecules containing two pairs of phased A-tracts that are out of phase with each other, s
6 progressively with the increasing number of phased A-tracts, as expected for DNA molecules with incr
7 , we have constructed ligation ladders, with phased A5 and ATATA sequences in the same flanking seque
9 to T cell priming if provided appropriately phased activatory stimuli, an observation that could be
13 he EE motif, a significant subset is morning phased and enriched for previously unrecognized motifs a
16 hirty-eight of the 24-mer clusters were also phased and preferentially expressed in inflorescences.
18 hich arm possesses the more extensive set of phased anisotropic bending signals, with the Mu right ar
20 e electronic monitoring was implemented by a phased approach between December 2005 and July 2007.
21 in an accompanying publication and suggest a phased approach to diagnostics evaluation; entry criteri
22 nd within hospitals, ranging from preplanned/phased approaches to the checklist simply "appearing" in
23 ater emulsion system which simulated a multi-phased aqueous food system containing oil and beta-gluca
24 f a large-scale two-dimensional nanophotonic phased array (NPA), in which 64 x 64 (4,096) optical nan
25 imize the phases used to drive an ultrasonic phased array and show that acoustic levitation can be em
26 radient metasurface structures consisting of phased array antennas are able to circumvent the phase-m
27 the Advanced Land Observation System (ALOS) Phased Array L-band Synthetic Aperture Radar (PALSAR) mo
28 ects are broadly similar to those found in a phased array-an engineering design widely found in human
30 magnetic resonance imaging by using a pelvic phased-array coil and DW imaging (maximum b value, 2000
31 ast material-enhanced imaging, with a pelvic phased-array coil before radical prostatectomy were incl
32 phased-array head coil and a twelve-channel phased-array coil for the whole body, consisting of an e
33 es were performed at 1.5 T by using a pelvic phased-array coil in combination with an endorectal coil
34 eighty-five patients with PC underwent 3.0-T phased-array coil prostate magnetic resonance (MR) imagi
36 Using a 3T MR system and a combination of phased-array coils, a 20x20x40 mm(1)H MRS voxel was sele
38 equipped with three coils: an eight-channel, phased-array head coil and a twelve-channel phased-array
39 stems, electrocaloric coolers for computers, phased-array radar, and three-dimensional trenched capac
41 example, we demonstrate two second harmonic phased-array sources that perform two optical functions
43 sibilities for half-wavelength-pitch optical-phased arrays and ultra-dense space-division multiplexin
45 and therefore extends the functionalities of phased arrays beyond conventional beam focusing and stee
47 -scale radiofrequency phased arrays, optical phased arrays have a unique advantage in that the much s
49 ctric on-chip polarization rotators based on phased arrays of Mie resonators with negligible insertio
50 radient metasurface structures consisting of phased arrays of plasmonic or dielectric nanoantennas ca
51 siRNAs (tasiRNAs) that form in 21-nucleotide phased arrays through the RDR6/DCL4-dependent pathway an
52 d nonlinear heterostructure will enable such phased arrays to span most of the infrared spectrum.
53 This phenomenon constitutes the basis of phased arrays, commonly used at microwave and radio freq
54 bersome to deploy large-scale radiofrequency phased arrays, optical phased arrays have a unique advan
57 at nucleosomes remain strongly organized and phased at many facultative distal regulatory elements, e
58 on rules of a femtosecond infrared helically phased beam into its high-order harmonics, showing that
59 s a good model for protein-free rotationally phased bent DNA of the same curvature as in a nucleosome
60 suggesting that highly conserved temporally phased biotic interactions are ubiquitous among plankton
64 Illumina short-read data with long reads, we phased both single-nucleotide variants and SVs, generati
65 alse positive single nucleotide variants not phased by multiple LFR haplotypes resulted in a final ge
66 Also, eight of eight top ranked deletions phased by only HiC were validated using long range polym
69 d in England for adults aged 70 years with a phased catch-up programme for those aged 71-79 years.
70 ion as a risk-mitigation strategy before the phased cessation of OPV (starting with Sabin type 2) and
71 onstrate that pre-iPSCs have a more open and phased chromatin architecture than that of MEFs and iPSC
72 chimeric Chd1-Ume6 or endogenous Isw2 shifts phased chromatin arrays in cooperation with endogenous c
74 t phenotypes and connections between evening-phased circadian clock components and CBF3 transcription
75 rabidopsis JMJD5 is coregulated with evening-phased clock components and positively affects expressio
76 s a delay and reduction in levels of evening-phased clock gene transcripts and significant lengthenin
77 atory mechanism is the repression of evening-phased clock genes via the binding of morning-phased Myb
79 (Kd = 5.9 +/- 2.4 microM), but a novel, two-phased competitive binding strategy was necessary to asc
81 his clone-based haplotype map against HapMap phased data sets, we estimate an error rate of 0.71% whe
86 1)/PRR1, PRR3, PRR5, PRR7, and PRR9 are each phased differently over the course of the day and loss o
88 of Assembly 22, the first chromosome-level, phased diploid assembly of the C. albicans genome, coupl
90 tions of CAP and RNAP with promoter DNA, and phased-DNA-bend-dependent partial wrapping of DNA around
91 upon spacing and sequence, and was marked by phased DNase I hyperactivity and protection patterns con
93 Future use of the hydrofluorocarbons will be phased down and, thus replacement fluids must be found.
94 ort term, matched by outside funds, could be phased down within 10 years assuming strategic investmen
95 vide a framework for the further analysis of phased down-stream regulation of gene action, possibly b
96 A(3) were analyzed using an experimental MAD-phased electron density map that was calibrated to an ab
97 ancies we sought to obtain an experimentally phased electron density map that was free of possible bi
100 rved mechanisms that can produce distant but phased features on transcript and proteome isoforms.
104 healthy PRDM9-knockout mother and performed phased genome sequencing on her, her child, and control
105 se diverse data types with each individuals' phased genome, we identified widespread tissue-specific
107 nctional genomic data obtained from multiple phased genomes in a graphical interface with access to m
109 olution in the recent past, and they require phased genomes, which contain switch errors that can cat
112 ACE ('Assessing Changes to Exons') converts phased genotype calls to a collection of explicit haplot
113 stances of cis-acting co-regulation by using phased genotype data and discovered 233 SNPs as the most
119 pdate, and (ii) it is much faster to match a phased GWAS haplotype to one reference haplotype than to
121 ficantly improves the switch accuracy within phased haplotype blocks as compared to existing haplotyp
123 me sequencing, the basic goal of producing a phased (haplotype-resolved) genome sequence with end-to-
126 first whole-genome catalogue of variants and phased haplotypes in people of Amish and Mennonite ances
127 input data from real or previously simulated phased haplotypes, allowing it to mimic very closely the
129 ult to investigate, and the determination of phased "haplotypes" has been particularly problematic.
132 is used in this study as a marker in reverse-phased HPLC (RP-HPLC) analyses of adenovirus for the qua
134 based on the analysis of SNPs and indels in phased human genomes, we observe that replication asynch
135 cterization of a helical peptide, which uses phased hydrophobic interactions to drive assembly into n
136 We have developed this principle into a two-phased immunogen evaluation pipeline to rank-order vacci
138 sis of participants in a cluster-randomized, phased-implementation trial of isoniazid preventive ther
139 pes sampled from 32 sire/dam/offspring trios phased in a previous study) led to an overall increase i
140 igh-resolution haplotypes (78.6% of variants phased in a single block) with high pairwise phasing acc
141 hich, according to segregation analyses, are phased in a single copy of each of the affected chromoso
142 Even with maximally feasible reductions phased in from 2015 to 2035, global mean temperatures in
144 atter emissions standards (EURO 5 and 6) are phased in, the short-term warming due to a diesel car be
145 lytic reduction (SCR) systems that are being phased-in to control on-road diesel NO(x) emissions in t
146 These results suggest that the biogenesis of phased inflorescence RNAs resembles that of tasiRNAs and
147 algorithm to take advantage of the partially phased information contained in long genomic fragments a
149 ized by siRNAs spaced in 21-nucleotide (nt) "phased" intervals, a pattern formed by DICER-LIKE 4 (DCL
150 ften expose inadequacies in the conventional phased investigational therapeutic development paradigm.
153 its primary end point of improved irPFS for phased ipilimumab versus the control (hazard ratio [HR],
155 immune-related AEs were 15%, 20%, and 6% for phased ipilimumab, concurrent ipilimumab, and the contro
156 Further analysis revealed that the morning phased LNK1 and LNK2 genes control circadian rhythms, ph
157 ication in an allele-specific, chromosomally phased manner, we determined for the first time the repl
159 orted a small-RNA species of phased and half-phased miRNA-like RNAs different from canonical miRNAs f
160 The target genes of those phased and half-phased miRNA-like RNAs function in process of cell growt
161 hased clock genes via the binding of morning-phased Myb-like repressors to evening element (EE) promo
162 could resist the assembly of highly ordered (phased) nucleosome arrays that have been proposed as a p
163 n of the degree to which they are flanked by phased nucleosomes and subnucleosome-sized particles.
164 odifications and the presence of either well-phased nucleosomes or nucleosome-depleted regions, respe
165 of these low-salt soluble fractions display phased nucleosomes over transcriptionally active genes t
166 hypersensitivity and are flanked by strongly phased nucleosomes, consistent with known TF binding sit
168 al cost because (i) the GWAS samples must be phased only once, whereas standard methods would implici
169 t-read DNA sequencing data and statistically phased onto haplotype blocks in 26 human populations.
171 sed 1.5% or less space to flexibly represent phased or unphased genotypes with multiple alleles and a
172 oliferation, the use of HEU targets is being phased out and alternative strategies for production of
173 g-chain PFAAs, as these substances are being phased out and replaced by a wide variety of PFASs with
174 ing compound, methyl bromide (MeBr) is being phased out despite being considered to be the most effec
175 nducted a field study after chlorpyrifos was phased out for indoor use in the United States in 2001 t
177 lling plant pests, methyl bromide (MeBr) was phased out in 2005 in the USA, because it can deplete th
178 ybrominated diphenyl ethers (BDEs) are being phased out in many countries, soils could become a secon
183 d hydrochlorofluorocarbons have already been phased out under the Montreal Protocol due to concerns a
190 DE and OctaBDE were banned in California and phased-out of US production; resulting impacts on human
191 and polyfluoroalkyl substances (PFASs) were phased-out of use due to concerns raised by their persis
192 rounding population density, suggesting that phased-out PBDEs continued to be emitted from population
193 s) are becoming popular replacements for the phased-out polybrominated diphenyl ether (PBDE) mixtures
194 remaster((R)) 550 (FM 550), and the recently phased-out polybrominated diphenyl ethers (PBDEs), all o
199 onal origin of those haplotypes by employing phased parental genotypes and deciphering WGA-distorted
201 3 slicing is required to efficiently trigger phased piRNA production, an alternative, slicing-indepen
203 plotype transmission information to create a phased "Platinum" variant catalog of 4.7 million single-
205 nationally agreed package of prioritised and phased primary health care that all stakeholders are com
206 e abundance of piRNAs, whereas production of phased primary piRNAs from cleaved transposon RNAs adds
207 quent ~26 nt become the first in a series of phased primary piRNAs that bind Piwi, allowing piRNAs to
208 d is the gold-standard for dealing with many phased processes in ecology and epidemiology, but its ap
209 these families could also initiate secondary phased production from its target of a putative trans-ac
211 found that membrane expression of correctly phased R16/17 was sufficient to recruit nNOS to the sarc
212 r pulmonary vein isolation using duty-cycled phased radio frequency energy (2:1 or 4:1 bipolar/unipol
214 ized clinical trial comparing multielectrode-phased radiofrequency ablation (MEA) to standard focal i
215 ielectrode ablation catheter and duty cycled phased radiofrequency energy delivery results in a consi
216 diofrequency system (Biosense-Webster) and a phased radiofrequency multielectrode system (pulmonary v
217 mycophenolate mofetil (MMF) to facilitate a phased reduction in the dose of CNI in a group of patien
218 APMIX at inferring ancestry when preexisting phased reference data are unavailable and genomes are se
219 hods require high-coverage genotype data and phased reference panels, and are therefore inappropriate
220 beta-spectrin repeats comprise the minimal, phased region of beta-spectrin, which binds ankyrin at t
221 ithin an oligonucleotide, binding of RecA is phased relative to it, with a periodicity of three nucle
224 ficance of these results in the context of a phased release of transgenic mosquitoes, and the need fo
225 tion and Endgame Strategic plan outlines the phased removal of oral polio vaccines (OPVs), starting w
226 nce motifs, including Z-DNA, G-quadruplex, A-phased repeats, inverted repeats, mirror repeats, direct
227 -endothelial molecular pathway governing the phased response of angiogenesis and lymphangiogenesis fo
228 SE REGULATOR 9 promoter, itself confers dawn-phased rhythms and has allowed us to define a new clock
229 RNAs and, strikingly, 831 of these contained phased RNAs and were preferentially expressed in develop
230 n African samples, which was based on a trio-phased scaffold, increases downstream imputation accurac
233 response factor; (2) reduced accumulation of phased secondary small interfering RNAs from two genomic
235 ne such family specific to plants is that of phased, secondary siRNAs (phasiRNAs); these require RDR6
236 these pathways converge in the production of phased, secondary, small interfering RNAs (phasiRNAs), o
239 cohort, we demonstrate how the prediction of phased sequences inferred from GWAS SNP genotype data ca
240 gene sequencing method (ISS), which predicts phased sequences of intragenic regions, using SNPs.
241 hod is to infer diploid sequences (a pair of phased sequences/alleles) at every functional locus util
242 ut also increase the probability of covering phased single-nucleotide polymorphisms (SNPs), which all
245 n also resulted in increased accumulation of phased siRNAs (phasiRNAs) that are predominantly generat
246 fying over 500 loci generating 21-nucleotide phased siRNAs (phasiRNAs; from PHAS loci), of which 483
249 nthers plus mature pollen we find that 21-nt phased siRNAs from 463 loci appear abruptly after germin
250 nd possibly also the associated formation of phased siRNAs, may function as a novel layer of molecula
252 evolved similar tasiRNA pathways to initiate phased small interfering RNA (phasiRNA) production from
253 ca and shed light on the evolution of miRNAs/phased small interfering RNA networks that regulate larg
254 e new cluster is 22 nucleotides and triggers phased small interfering RNA production from six FBX gen
256 rthermore, miR4376 triggers the formation of phased small interfering RNAs (siRNAs) from Sl ACA10 and
257 cript/genomic sequences, and then identifies phased small RNA clusters by evaluating P-values of hype
260 s developed to identify both the clusters of phased small RNAs as well as the potential phase-initiat
263 , we also identified some additional miRNAs, phased smRNA clusters and small-interfering RNAs derived
265 ant signal processing method, referred to as phased spectrum deconvolution method (PhiSDM), designed
266 on and PCR stage enables the construction of phased synthetic reads from each of the nearly 10,000 'v
267 n of dsRNA and Dicer-like processing, yields phased ta-siRNAs that negatively regulate other genes.
271 lex and these bends accumulate when properly phased, the observed clusters would facilitate DNA loopi
272 of disorders, ranging from exaggerated fluid-phased thrombosis dependent on prothrombotic agents such
276 pression must be circadian and appropriately phased to support rhythms, and AVP receptor signaling is
278 "staggered sweep." It is named for its three-phased trajectory: (i) Initially, the two linked mutatio
279 guided slicing is required for biogenesis of phased, trans-acting siRNAs (tasiRNAs), whose cleaved pr
280 resident and recruited immune cells, and the phased transition from destructive to reparative inflamm
281 s from a single individual can be accurately phased using a combination of shotgun and proximity liga
283 of structures solved at X-ray FELs have been phased using external information via molecular replacem
287 tegrated binding data with transcriptome and phased WGS data to investigate allelic DAP interactions
290 ord, the delta(18)O residue is strongly anti-phased with Antarctic temperature variability on sub-orb
293 osome in which the DNA has been rotationally phased with respect to the histone octamer by TG motifs.
295 dgame Strategic Plan 2013-2018 calls for the phased withdrawal of OPV, beginning with the globally sy
297 dgame of polio eradication which calls for a phased withdrawal of oral polio vaccine beginning with t
299 el ptychographic experiment using a randomly phased X-ray probe to considerably reduce the dynamic ra
300 varying ratios yields multicomponent single-phased [Zn(2)(fu-bdc')(2x)(fu-bdc'')(2-2x)(dabco)](n) MO
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