コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 Recovery is 90% for a pure phosphopeptide.
2 (D) of 0.35 nm in 1:1 binding to its cognate phosphopeptide.
3 antibody shows full specificity for a single phosphopeptide.
4 and is not significantly activated by an RTK phosphopeptide.
5 ammalian capping enzyme (Mce) bound to a CTD phosphopeptide.
6 o remove the NPE group and liberate a second phosphopeptide.
7 ysate, representing a more natural source of phosphopeptides.
8 omatography for the sequential enrichment of phosphopeptides.
9 cles to create membranes that rapidly enrich phosphopeptides.
10 uced efficiency, indicating a preference for phosphopeptides.
11 monoliths with surface layers selective for phosphopeptides.
12 ation and enrichment of different classes of phosphopeptides.
13 tion-specific amino acid patterns in sets of phosphopeptides.
14 parison with nano-LC-MS for the detection of phosphopeptides.
15 the quantitation of peptides as well as for phosphopeptides.
16 ation of different S-containing peptides and phosphopeptides.
17 analysis has been commonly used for mapping phosphopeptides.
18 ase of HNF-4alpha phosphorylation in several phosphopeptides.
19 sphate are frequently observed during CID of phosphopeptides.
20 the phosphorylation of 29 of 530 quantified phosphopeptides.
21 min), we carried out quantification of 2884 phosphopeptides.
22 hment provided more than 90% selectivity for phosphopeptides.
23 er been used for the selective enrichment of phosphopeptides.
24 dues, interfering with the identification of phosphopeptides.
25 R, and EDX and employed in the enrichment of phosphopeptides.
26 r abilities to enrich for different types of phosphopeptides.
27 ave selective affinity and can interact with phosphopeptides.
28 percentage of longer, basic, and hydrophilic phosphopeptides.
29 mined 14-3-3-binding motifs from non-binding phosphopeptides.
30 ble quantitation across tens of thousands of phosphopeptides.
31 ocols yielded comparable numbers of distinct phosphopeptides, 1693 and 1842, respectively, from micro
33 he phosphoproteomic results of increased T31 phosphopeptide abundance with decreased MKK2 abundance i
35 as also demonstrated on the basic and acidic phosphopeptides: acidophilic phosphorylation sites were
36 echniques that reproducibly measure the same phosphopeptides across multiple replicates, conditions,
38 ptide, and the interaction with the tyrosine phosphopeptide affects the pyruvate kinase activity of P
39 inase:substrate relationship analysis of the phosphopeptides also revealed ABL1 and SRC tyrosine kina
42 (i) ratio distortion remained a problem for phosphopeptide analysis in multiplexed quantitative work
44 ical binding interface to recognize the Cdc7 phosphopeptide and a non-canonical interface to bind Dbf
46 tative phosphoproteomic dataset yielded 2250 phosphopeptides and 1314 localized phosphosites with exc
47 enriched considerably longer and more acidic phosphopeptides and consequently, we identified 327 phos
51 acid was used to overcome the degradation of phosphopeptides and provide high intensity phosphopeptid
52 r studying weak bonds between metal ions and phosphopeptides and provided a direct means of thermodyn
53 ID fragmentation analysis between unmodified phosphopeptides and those modified online with FBDSA or
54 monstrated that PKM2 interacts with tyrosine phosphopeptide, and the interaction with the tyrosine ph
57 esence of nano-TiO2 for selective binding of phosphopeptides, and the magnetic responsiveness of magn
58 signal intensities were enhanced for most pY-phosphopeptides (approximately 70%) when using the pY-MI
60 thodologies to enrich heterogeneous types of phosphopeptides are critical for comprehensive mapping o
61 present study, the fragmentation patterns of phosphopeptides are improved through ion/ion-mediated pe
64 phosphoproteomic study identified additional phosphopeptides as possible targets that show the involv
69 re-affinity relationship studies showed that phosphopeptides based on Tyr631 from IL-4Ralpha bind wit
71 7 phosphorylation sites from 13029 different phosphopeptides belonging to 3163 different phosphoprote
74 in evolution techniques and isolate new anti-phosphopeptide binding specificities from a library of v
75 an attractive avenue for generating new anti-phosphopeptide binding specificities in vitro by phage d
77 bryonic DNA damage responses by means of its phosphopeptide-binding ability: activating Mnk in the nu
78 rupting effect on the structure of the N-SH2 phosphopeptide-binding cleft mediating the interaction o
80 HA1 domain and demonstrated that engineering phosphopeptide-binding domains is an attractive avenue f
83 ures revealed that the monobodies occupy the phosphopeptide-binding sites of the SH2 domains and thus
84 profiling approaches, we found that a pY251 phosphopeptide binds specifically to a subset of SH2 dom
85 structures of inactive, preactivated p44 and phosphopeptide-bound arrestins and will guide our unders
86 ue generated a highly specific separation of phosphopeptides by an applied pH gradient between 9.2 an
87 tive approach for improved identification of phosphopeptides by sequential abundant ion fragmentation
88 re minimal differences between enrichment of phosphopeptides by TiO2 and Ti(4+)-IMAC when considering
90 h throughput approach, based on high density phosphopeptide chips, to determine the in vitro substrat
94 derived for only a few 14-3-3 complexes with phosphopeptide-containing proteins and a variety of comp
95 Phosphoproteomic analysis revealed that 19 phosphopeptides corresponding to 12 proteins were differ
96 ptides, we extracted 849 uniquely identified phosphopeptides corresponding to 425 proteins and identi
99 n total, the SPS-MS3 method quantified 38247 phosphopeptides, corresponding to 11000 phosphorylation
101 analysis identified that 35 serine/threonine phosphopeptides, corresponding to 27 proteins, were uniq
103 ochemical properties of pY-MIP-TiO2-enriched phosphopeptides demonstrated that this protocol retrieve
104 rative evaluations of enrichment methods for phosphopeptides depend highly on the experimental protoc
105 was synergistic with activation by a soluble phosphopeptide derived from receptor tyrosine kinases.
108 these in vitro phosphorylated peptides with phosphopeptides derived from endogenous proteins isolate
111 is study, we evaluated two HLA-A2-restricted phosphopeptides derived from the insulin receptor substr
115 ichment and Fourier transform MS analysis of phosphopeptides digested from a complex mixture containi
117 proteins, >300 protein kinases, and >15,000 phosphopeptides, enabled deep insight into signaling rec
118 14-3-3 isotypes gamma, theta, and zeta with phosphopeptides encompassing pS910, pS935, or pS1444 dem
120 d human blood serum, are used to explore its phosphopeptide enrichment ability from complex samples f
122 hieve precise quantitation, followed by TiO2 phosphopeptide enrichment and high resolution mass spect
124 ere determined by a strategic combination of phosphopeptide enrichment and nano-ultra-performance liq
129 re demonstrated to be superior to TiO(2) for phosphopeptide enrichment from a complex mixture with hi
133 nd inactive states of kinases but performing phosphopeptide enrichment made it possible to measure th
134 ffinity purification, mass spectrometry, and phosphopeptide enrichment of isotope-labeled peptides, w
136 We provide a free downloadable automated phosphopeptide enrichment program to facilitate uniform
137 been identified using these highly selective phosphopeptide enrichment protocols in combination with
138 The combination of pY-MIP- and TiO2-based phosphopeptide enrichment provided more than 90% selecti
139 tein phosphorylation that relies on a single phosphopeptide enrichment step using titanium dioxide mi
140 ere, we simplified the assay by removing the phosphopeptide enrichment step, increasing throughput wh
142 se unique properties render the pY-MIP-based phosphopeptide enrichment technique an attractive altern
145 e composite exhibits enhanced capability for phosphopeptide enrichment with sensitivity assessed to b
146 amino acids in cell culture, affinity-based phosphopeptide enrichment, and high-resolution mass spec
147 an inverse strategy based on TiO2 selective phosphopeptide enrichment, fractionation by strong catio
148 ication technology (MudPIT), without or with phosphopeptide enrichment, was applied to study the prot
156 VVTITK, corresponding to Ser736, and an NF-H phosphopeptide, EPDDAKAKEPS*KP, corresponding to Ser942.
157 devised a strategy that enhances analysis of phosphopeptides, especially multiply phosphorylated pept
160 reacted with HPO4(2-), phosphoserine, and a phosphopeptide (FQpSEEQQQTEDELQDK, abbreviated "betacas"
162 fragments and comigration of PKC-stimulated phosphopeptide fragments with NDAT Ser-7 phosphopeptide
164 broblast cell lysate a total of 1,944 unique phosphopeptides from 1,087 unique phosphoproteins were i
166 SI/MS)) can broadly baseline-resolve variant phosphopeptides from a biologically modified human prote
167 tem was applied for the enrichment of casein phosphopeptides from a simulated tryptic digest with bov
169 e protocols to enrich for subfemtomole-level phosphopeptides from cell line and human tissue samples
170 be developed to characterize HLA-associated phosphopeptides from clinical samples that are limited b
171 gated for the enrichment and purification of phosphopeptides from digested protein mixture solutions.
172 e been demonstrated by effectively enriching phosphopeptides from digests of phosphoprotein (alpha- o
173 affinity capture and identification of 3,908 phosphopeptides from fractionated whole-heart homogenate
176 Several methods were employed for isolating phosphopeptides from proteolytically digested plasma mem
177 ses is carried out for the identification of phosphopeptides from serum digest and HeLa cell extract.
179 e is applied for the selective enrichment of phosphopeptides from tryptic digest of standard protein
182 otypes comprising 14,165 proteins and 18,405 phosphopeptides (from 4,511 proteins), quantified across
183 ides, and for the synthesis of, for example, phosphopeptides, glycopeptides, and N-methylated peptide
188 However, water molecules interact with the phosphopeptide in the hydrophilic region of the lattice.
191 ania platform can also be used for detecting phosphopeptides in cancer cells (HeLa cells), where it s
192 al of ultra-low flow ESI for the analysis of phosphopeptides in liquid based separation techniques.
193 of phosphoangiotensin and recover 70% of the phosphopeptides in mixtures with a 15-fold excess of non
194 oach for sequentially uncaging two different phosphopeptides in one system, enabling interrogation of
196 oproteomics to compare the global changes in phosphopeptides in WT and snrk2.2/2.3/2.6 triple mutant
200 ner proteins usually bind via insertion of a phosphopeptide into an amphipathic groove of 14-3-3.
203 ng them through immunization of animals with phosphopeptides is expensive, laborious, and time-consum
204 Collision-induced dissociation (CID) of phosphopeptides leads to the loss of phosphoric or metap
205 f-of-concept 10-plex experiment, we compared phosphopeptide levels from five murine brains to five li
206 We have applied FAIMS to the analysis of a phosphopeptide library comprising the sequences GPSGXVpS
207 yme binding and activity with a microarrayed phosphopeptide library printed on chips coated with eith
211 ncation analysis, site-directed mutagenesis, phosphopeptide mapping, and phosphoamino acid analysis,
212 s, coupled with phosphorylation analysis and phosphopeptide mapping, to identify Ser-45 and Ser-46 of
213 ion analysis, site-directed mutagenesis, and phosphopeptide mapping, we identified Ser-677, Ser-769,
215 ry identified 14,155 spectra of 3,371 unique phosphopeptides mapping to 1,159 proteins (false discove
217 The major components of the pipeline include phosphopeptide meta-analysis, correlation network analys
218 al challenge to analysis is the formation of phosphopeptide-metal ion complexes during LC which hampe
221 lculated Cscore from a large data set (>7000 phosphopeptide MS/MS spectra) was approximately 32 compa
222 e of pY-MIP for enrichment and sequencing of phosphopeptides obtained by tryptic digestion of protein
223 iron fortified goat and cow milks and casein phosphopeptides obtained from each species of milk was d
224 itors that disrupt the interaction between a phosphopeptide of SLAM (signaling lymphocytic activation
226 identification of over 10,000 unique "basic" phosphopeptides of which many represent putative targets
227 ntially expressed proteins and 11 543 unique phosphopeptides, of which 80% are novel and 7% preferent
228 Polar analytes, including neurotransmitters, phosphopeptides, oligonucleotides, illicit drugs, and ph
231 estigated the thermodynamic properties of 18 phosphopeptides or peptide with phosphate mimic and thre
234 ve reproducibility by label-free analysis of phosphopeptide peak areas from replicate purifications (
237 strategies, we succeeded in quantifying 1371 phosphopeptides present in the CE-MS data set and found
238 enables the identification of HLA-associated phosphopeptides presented by human tissue samples contai
240 tor interaction between a glycopeptide and a phosphopeptide produces sPGPs that form nanoparticles, w
241 to which phosphate neutral loss occurs from phosphopeptide product ions due to the infrared photoact
242 imensional thin layer chromatography tryptic phosphopeptide profiles suggested that Ser-395 was targe
243 f phosphopeptides and provide high intensity phosphopeptide protonated molecular ion signal intensiti
244 terization of commonalities among identified phosphopeptides provides insights into the specificities
246 the well-established SCX-TiO(2) workflow for phosphopeptide purification on a proteome-wide scale.
247 on interference, we assessed the accuracy of phosphopeptide quantitation across a variety of experime
248 otope-assisted mass spectrometric methods of phosphopeptide quantitation to characterize proteins in
251 richment demonstrates reproducible synthetic phosphopeptide recovery across 2 orders of magnitude, "w
252 d SWATH-MS and benchmarked using a synthetic phosphopeptide reference data set and phosphopeptide-enr
253 ptides showed large sequence homology in the phosphopeptides released by tryptic hydrolysis and simul
255 of the Dok7 PH-PTB domains in complex with a phosphopeptide representing the Dok7-binding site on MuS
256 The comparison showed significantly improved phosphopeptide sensitivity in equal sample load and equa
257 s in human CD8 T cells imparted high-avidity phosphopeptide-specific recognition and cytotoxic and cy
258 ed a peptide esterification step to increase phosphopeptide specificity from these low-input samples.
259 ow that AI-ETD can identify 24,503 localized phosphopeptide spectral matches enriched from mouse brai
260 hoproteomics of NFTs clearly identified NF-M phosphopeptides SPVPKS*PVEEAK, corresponding to Ser685,
263 limited repeatability and linearity for most phosphopeptides tested, and different phosphopeptides we
264 involved the microinjection of a fluorescent phosphopeptide that is hydrolyzed specifically by PTPs.
265 t TiO2 enrichment does not fully recover the phosphopeptides that are not identified with the corresp
270 es demonstrated that this protocol retrieved phosphopeptides that tend to be smaller (<24 residues),
273 ir activities are further enhanced by an RTK phosphopeptide to levels markedly exceeding that of acti
276 s present in the CE-MS data set and found 49 phosphopeptides to be differentially regulated in the tw
277 ficient protection against phosphate loss in phosphopeptides upon collision-induced dissociation tand
278 ratio of (18)O- versus (16)O-labeled tryptic phosphopeptide using high mass accuracy mass spectrometr
280 binding affinities of Ga(3+) and Fe(3+) for phosphopeptides, we designed a metal-directed immobilize
281 ized metal affinity chromatography to enrich phosphopeptides, we extracted 849 uniquely identified ph
283 r relative and absolute quantitation-labeled phosphopeptides were analyzed by liquid chromatography-t
285 whereas only 10% of 5069 monophosphorylated phosphopeptides were commonly enriched in both fractions
286 de enrichment and purification process, only phosphopeptides were enriched and separated from the oth
288 r most phosphopeptides tested, and different phosphopeptides were found to have different linear rang
290 erties and resolution in MALDI-TOF-MS, these phosphopeptides were identified as suitable markers for
294 col in which the selectivity and recovery of phosphopeptides were optimized by assessing a twenty-poi
296 th IMAC and TiO2 enriched similar amounts of phosphopeptides with comparable enrichment efficiency.
298 e present a straightforward method to enrich phosphopeptides with multiple basic residues, an under-r
300 identified and quantified over 13,000 unique phosphopeptides, with a large percentage dependent on Sy
WebLSDに未収録の専門用語(用法)は "新規対訳" から投稿できます。