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1 ar surface is calculated based on the atomic point charges.
3 chemistry methods were used to assign atomic point charges, and molecular simulations were used to as
4 les with proton positions optimized inside a point charge array are used to estimate the contribution
8 simple van der Waals interactions and atomic point-charge electrostatics account for the most importa
10 ar dynamics simulations employing the simple point charge-extended water model at room temperature sh
13 ency indicated that the repositioning of the point charge in the Glu232Asp mutant might affect the or
14 point charge (EPC) method assigns effective point charges in a consistent way, taking into account t
15 a standard depletion attraction whereas the point charges interact through a screened Coulomb repuls
19 O(2) at 300 K by combining a flexible simple point charge model for water and an accurate flexible fo
22 kcal/mol, whereas differences between simple point charge models and more elaborate multipolar charge
23 static forces originating from clustering of point charges on the NTD surface required for function.
26 ta-sandwich proteins favor placing an inward-pointing charged side chain on one of the edge strands w
27 ility, confirming the hypothesis that inward-pointing charged side chains on edge beta-strands are an
28 ifferent water models [i.e., extended simple point charge (SPC/E) vs. four-site transferrable intermo
29 e accompanying paper makes use of the inward-pointing charge strategy with great success, turning hig
30 trostatic surface represented by hundreds of point charges; the linker DNAs are treated using a discr
32 line bilayer membrane and solvated by simple point charge water molecules inside the pore and at both
34 polyacrylamide gel grafted with concentrated point charges (zwitterionic macromolecules), in contrast
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