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1 h trimesoyl chloride, one of the monomers of polyamide.
2 eight, size, and color with the exception of polyamide.
3 cting a priori the nuclear uptake of a given polyamide.
4 the previously reported fluorescein-labeled polyamide.
5 incorporation of bromine and iodine into the polyamide.
6 culties synthesizing these tandem hairpin PI polyamides.
7 ys and compared to the corresponding hairpin polyamides.
8 g liver toxicity was only observed for three polyamides.
9 nker affects on the cellular permeability of polyamides.
10 d (alpha-amino-gamma-turn)-linked eight-ring polyamides.
11 inting data of DNA binding pyrrole-imidazole polyamides.
12 fective nuclear localization of HRE-targeted polyamides.
13 binds the HRE, is inhibited by HRE-targeted polyamides.
14 recognition motifs that can be inhibited by polyamides.
15 hway may also be involved in the response to polyamides.
17 abeled radioactive pyrrole-imidazole (Py-Im) polyamide 1, targeted to the 5'-WGWWCW-3' DNA sequence,
21 s that cause animal toxicity, we synthesized polyamides 1-4 with variations at the alpha- and beta-po
28 th positively charged polymeric beads, e.g., polyamide 6/6 (Nylon) and polyoxymethylene (Delrin), and
29 ease of the nanofiller and transformation of polyamide-6 (PA6), a thermoplastic polymer widely used i
30 sited via atomic layer deposition (ALD) onto polyamide-6 nanofibers enable the formation of conformal
31 Bio-based unsaturated nylon-6,6 (unsaturated polyamide-6,6) was finally obtained by polymerization of
32 y developed novel porous nano-hydroxyapatite/polyamide 66 (nHP66)-based nanoscaffold materials contai
33 rpin with a second turn unit yields a cyclic polyamide, a lesser-studied architecture mainly attribut
34 .G mismatches in DNA by imidazole containing polyamides, a full thermodynamic profile for formation o
35 To directly identify the binding sites of polyamides across the genome, we designed, synthesized,
37 averaged amide link scission in the aromatic polyamide active layer of a reverse osmosis membrane upo
38 uptake into the bulk region of the aromatic polyamide active layer of a reverse osmosis membrane upo
39 he partition coefficient of solutes into the polyamide active layer of reverse osmosis (RO) membranes
40 s, and measurements of charge density in the polyamide active layers of reverse osmosis (RO) and nano
44 Small animal PET imaging of radiolabeled polyamides administered to mice revealed distinct differ
45 serum concentration was similar for all four polyamides after injection, dose-limiting liver toxicity
46 on between maleimides and resin-linked diene-polyamides allows the latter to be used in the preparati
47 quence specificity and binding affinity, six polyamide analogues containing the core triheterocyclic
49 the carbon nanotubes are embedded within the polyamide and form ester bonds with trimesoyl chloride,
50 ation by fractionation on Amberlite(R) XAD16 polyamide and semi-preparative reverse-phase HPLC column
51 tructed from a DNA-binding pyrrole-imidazole polyamide and the peptide FYPWMK facilitates binding of
52 DNA dimerizer constructed from a DNA-binding polyamide and the peptide FYPWMKG facilitates the bindin
56 s will influence the further design of Py-Im polyamides and facilitate their study in animal models.
57 ts point to a new design principle to deploy polyamides and perhaps other synthetic molecules to effe
58 ing oligonucleotides, peptide nucleic acids, polyamides, and other approaches, recognition of mixed-s
59 e nucleic acids (PNAs), minor groove binding polyamides, and--more recently--engineered proteins such
70 no biological activity, two non-fluorescent polyamides are reported with activity rivaling that of t
71 h the DNA-binding properties of unconjugated polyamides are similar, the alpha-DABA conjugates displa
74 torily for the measured free energies of DNA-polyamide association in solution and the observed sites
76 minimum first step toward the translation of polyamide-based gene regulation from cell culture to sma
77 enome-wide view from live cells reveals that polyamide-based synthetic genome readers bind cognate si
81 structural requirements for zinc finger and polyamide binding and may eventually lead to the develop
82 the impact of different chromatin states on polyamide binding in live cells remains an unresolved qu
87 jor groove of the ERE, can be inhibited by a polyamide bound in the opposing minor groove of the ERE.
88 crystal structure of an 8-ring cyclic Py/Im polyamide bound to the central 6 bp of the sequence d(5'
89 ta-amino turn-linked eight-ring cyclic Py-Im polyamide bound to the central six base pairs of the seq
92 overed after exposure to control, mismatched polyamides but was recovered from 7 of 8 of these patien
93 oligonucleotides, peptide nucleic acids, and polyamides, but substantial efforts are currently devote
96 constructed by attaching the peptide to the polyamide C-terminus expand the range of protein-DNA dim
104 ute to the creation and application of these polyamide-carbon nanotube thin films is also reported.
106 o group on imidazole- and pyrrole-containing polyamides causes stacked polyamides to bind in the mino
108 the latter exhibiting 50% higher adhesion to polyamide coated crystals (mimicking an RO membrane surf
110 The 2-A crystal structure of the nucleosome-polyamide complex shows that the bivalent "clamp" effect
111 resent study, we synthesized tandem tetramer polyamides composed of four hairpin moieties, targeting
113 ze telomeres specifically, tandem hairpin PI polyamides conjugated with a fluorescent dye have been s
125 genome, we designed, synthesized, and tested polyamide derivatives that enabled covalent crosslinking
126 previously that a pyrrole-imidazole (Py-Im) polyamide designed to bind the consensus androgen respon
128 reached a maximum of approximately 25%, (iv) polyamide disintegration occurs when high free chlorine
129 the biological activity of pyrrole-imidazole polyamide DNA-binding molecules, we characterized the ag
130 igh-throughput analysis of pyrrole-imidazole polyamide DNA-binding specificity in a 10(12)-member DNA
132 ed covalent crosslinking and localization of polyamide-DNA interaction sites in live human cells.
133 ough mice treated with an alpha-DABA hairpin polyamide do not differ significantly from control mice,
137 implications of these data on the design of polyamide-dye conjugates for use in biological systems.
142 g diffusivities of several alcohols within a polyamide film of commercial RO membrane using attenuate
146 amides more easily, we have developed new PI polyamide fragments and have used them as units in Fmoc
149 This study reveals that the combination of polyamide groups, open metal sites, appropriate pore geo
150 A facile modular approach toward cyclic polyamides has been developed via microwave-assisted sol
151 scopy to study uptake of fluorophore-labeled polyamides has demonstrated the difficulty of predicting
152 d, but the study of telomeres using these PI polyamides has not been reported because of difficulties
153 odeoxynucleotide decoys or pyrrole-imidazole polyamides) has demonstrated antitumor responses with mi
157 , e.g., polytetrafluoroethylene (Teflon) and polyamide-imide (Torlon), discharge when the like-charge
159 ing by hERR2 is sensitive to the presence of polyamides in both the upstream minor groove CTE site an
162 sed library of non-fluorescent, HRE-targeted polyamides in which the C-terminus 'tail' has been syste
163 ynthetic alkylating agent (pyrrole-imidazole polyamide indole-seco-CBI conjugate; KR12) that selectiv
166 In enzalutamide-resistant LREX' cells, Py-Im polyamide interfered with both AR- and GR-driven gene ex
167 ve binding hairpin pyrrole-imidazole (Py-Im) polyamide interferes with RNA polymerase II (RNAP2) acti
170 ased monomers and polymers, and particularly polyamides, it should be noticed that very few natural a
171 have led to the formulation of a two-letter polyamide "language" in which the -ImPy- central pairing
172 membranes consist of a functional selective polyamide layer formed by highly reproducible interfacia
173 oscale nonuniformities inherently present in polyamide layer may reduce selectivity, e.g., for boron
175 the mechanism of phenol transport across the polyamide layer of RO membranes is studied using model p
176 conformational adjustment or displacement of polyamide ligands) on observed high resolution structure
177 Smoked meat sausages were packed into o-polyamide/low density polyethylene laminated film and co
180 m that mimics the surface chemistry of an RO polyamide membrane was synthesized stepwise on gold-coat
181 As reverse osmosis (RO) and nanofiltration polyamide membranes become increasingly used for water p
182 ive to the long-existing thin-film composite polyamide membranes for water separation applications.
183 ar dynamic simulations, however, reveal that polyamide membranes have a distinctly different structur
184 d by reverse osmosis (RO) and nanofiltration polyamide membranes that are widely used for water purif
185 ine and chlorine-treated thin-film composite polyamide membranes with either MgCl2 or CaCl2 draw solu
186 anes compared to control thin-film composite polyamide membranes, in both reverse and forward osmosis
190 igh-yielding routes to commercially valuable polyamide monomers using a single catalyst, telescopic w
192 s necessary for efficacy studies in animals, polyamides must be readily synthesized in solution.
194 rfacial polymerization to form free-standing polyamide nanofilms less than 10 nanometers in thickness
195 works (CAFs) by devitrification of amorphous polyamide network polymers using high-temperature and hi
197 Earlier, we have shown that an anti-TAR polyamide nucleotide analog (PNA(TAR)) conjugated to a m
198 utoxide) reacts with surface amide groups of polyamide nylon 6/6 to give (eta(2)-amidate)zirconium co
201 roperties of three pyrrole-imidazole (Py-Im) polyamides of similar size and Py-Im content but differe
202 e expression analysis of the effects of this polyamide on a set of glucocorticoid-induced and -repres
203 y stage therapeutic investigations involving polyamides or histone deacetylase inhibitors are being p
205 mers (G1-NH2) was covalently attached to the polyamide (PA) active layer of a commercially available
207 ed the interactions of an eight-ring hairpin polyamide (PA) and two beta derivatives as well as a six
208 standing the effects of chlorine exposure on polyamide (PA) based membranes is essential in membrane
212 53(Al), NH2-MIL-53(Al) and MIL-101(Cr)] in a polyamide (PA) thin film layer were synthesized via in s
213 walled carbon nanotubes (MWCNT) and aromatic polyamide (PA), was successfully prepared by interfacial
215 ere the most abundant compounds, followed by polyamides, plastic-based paints, polyvinyl chloride, po
219 , they are key monomers for the synthesis of polyamides, polyureas, polyepoxydes, which are all of gr
220 , and degradability of long-chain polyester, polyamides, polyurethanes, polyureas, polyacetals, and p
221 otency in cell culture, a focused library of polyamides possessing various modifications at the C-ter
222 d down by the biotin-labeled tandem tetramer polyamide probe confirmed its effective binding to telom
223 synthetic method of fluorescent tandem dimer polyamide probes composed of two hairpin moieties with a
225 new method, we synthesized four fluorescent polyamide probes for the human telomeric repeat TTAGGG,
226 xed cells with lower background signals than polyamide probes reported previously, suggesting that th
227 and fluorescence spectra of the fluorescent polyamide probes, and telomere staining in mouse MC12 an
230 owed by an acidic treatment that removes the polyamide protecting groups with no harm to the cycloadd
232 ma-turn increase the DNA-binding affinity of polyamides relative to the ( R)-alpha-amino-gamma-turn.
233 egulation of endogenous genes by DNA-binding polyamides requires effective nuclear localization.
235 osaccharide purification uses a normal-phase polyamide resin (DPA-6S) in custom-made pipette tips.
238 nd the language of current design motifs for polyamide sequence recognition to include the use of "wo
239 ained from a complete set of triheterocyclic polyamides show a dramatic difference in the affinity of
240 ped TFC PRO membranes consist of a selective polyamide skin formed on the lumen side of well-construc
243 e instruments included forceps, metallic and polyamide subretinal needles, and soft silicone-tipped i
245 e applied our methodology for solution-phase polyamide synthesis to cyclic polyamides with an improve
248 nce-specific agents, and it is the first non-polyamide, synthetic compound to specifically recognize
249 ty of the semisynthetic covalent DNA-binding polyamide tallimustine, which contains a benzoic acid ni
250 stigation of a DNA-binding pyrrole-imidazole polyamide targeted to bind the DNA sequence 5'-WGGWWW-3'
251 oximately 20-fold increase in the potency of polyamides targeted to the androgen response element (AR
254 turn potentiates the biological effects of a polyamide targeting the sequence 5'-WGWWCW-3' (W =A/T) b
255 a small library of hairpin pyrrole-imidazole polyamides targeting the sequence 5'-CGCG-3' and assesse
256 turn modifications enhance the uptake of all polyamides tested, while having a variable effect on the
257 ion, we designed a DNA minor groove-targeted polyamide that inhibits NES with low micromolar efficacy
260 king on the development of pyrrole-imidazole polyamides that bind to the minor groove of DNA in a seq
261 dies based on the structures of DNA bound to polyamides that have been designed to recognize the mino
262 ctivity in N-methylpyrrole/N-methylimidazole polyamides that helps explain how these molecules locate
264 utilizes pairing rules for pyrrole-imidazole polyamides that target specific sites in the minor groov
265 ing the intracellular concentration of Py-Im polyamides that will prove valuable for future applicati
266 s and specificities of the tandem hairpin PI polyamides, the UV-vis absorption and fluorescence spect
267 eriments with cellulose triacetate (CTA) and polyamide thin-film composite (TFC) FO membranes demonst
268 be reduced to a dipeptide WM attached to the polyamide through an epsilon-aminohexanoic acid linker w
271 pyrrole-containing polyamides causes stacked polyamides to bind in the minor groove of DNA in the sta
272 e N-terminus is important for the binding of polyamides to DNA in a stacked and staggered motif.
273 g of two bioactive and structurally distinct polyamides to genomes directly within live H1 human embr
279 probes have been proposed as alternatives to polyamides, triplex-forming oligonucleotides, and peptid
280 the biodistribution of a 5-ring beta-linked polyamide versus an 8-ring hairpin, which exhibited bett
283 The solubility of both hairpin and cyclic polyamides was increased upon addition of carbohydrate s
285 lutes and the membrane phase (fully aromatic polyamide) was computed from molecular dynamics (MD) sim
287 he presence of site-specifically bound Py-Im polyamides, we find that the pol II elongation complex b
290 Cyclooctyne-derivatized pyrrole-imidazole polyamides were immobilized on azide-modified glass subs
291 NA binding affinities of a library of cyclic polyamides were measured by DNA thermal denaturation ass
293 We have used synthetic pyrrole-imidazole polyamides, which bind specific sequences in the minor g
295 analysis by RNA-seq compares the DNA-binding polyamide with the well-characterized NF-kappaB inhibito
296 solution-phase polyamide synthesis to cyclic polyamides with an improved high-yield cyclization step.
297 of a new class of pyrrole-imidazole hairpin polyamides with beta-amino-gamma-turn units for recognit
298 These insights allow the redesign of hairpin polyamides with different turn units capable of distingu
299 ies that govern the molecular recognition of polyamides with DNA, we are poised to systematically edi
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