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   4  a novel novobiocin analogue, in which the 3-prenyl-4-hydroxybenzoate of novobiocin is replaced with 
  
     6 rotein to react with C2,3 double bond in the prenyl acceptor to form PSPP, with the lower two-thirds 
     7   Mimetics of the C-terminal tetrapeptide of prenyl acceptors have been previously shown to inhibit m
     8 tool, 38 potential substrates were tested as prenyl acceptors in assays with three prenyltransferases
  
  
  
  
    13 MTPT to protect linear peptides by attaching prenyl and methyl groups at their free N- and C-termini.
    14 d monolayer lipoprotein particles containing prenyl and neutral lipids and several dozen proteins mos
    15 ro, tertiary amino, and N-alkyl, N-benzyl, N-prenyl, and N-silyl tert-butyl carbamate groups were tol
  
    17 d proteins is likely due to sequestration of prenyl binding protein delta (PrBPdelta) by ARL3-Q71L as
    18 l organization of K-Ras is controlled by the prenyl binding protein PDEdelta, which enhances Ras diff
    19    The mouse Pde6d gene encodes a ubiquitous prenyl binding protein, termed PrBP/delta, of largely un
    20  pocket and renders the protein incapable of prenyl binding, is supported by molecular dynamics simul
  
    22 n the domain suggested to form a hydrophobic prenyl-binding pocket for the gamma subunit's prenyl gro
    23 novel, unrelated chemotype that binds to the prenyl-binding pocket of PDEdelta with high affinity, th
    24 t the small-molecule Deltarasin binds to the prenyl-binding pocket of PDEdelta, and impairs Ras enric
    25 se (PDEdelta), which possesses a hydrophobic prenyl-binding pocket, is able to function as a potentia
  
  
    28 tions with its inhibitory gamma-subunit, the prenyl-binding protein (PrBP/delta), and activated trans
    29 ctor of phosphodiesterase 6 Delta (PDE6D), a prenyl-binding protein and chaperone of prenylated prote
    30 pha and PDE6beta and can form a complex with prenyl-binding protein delta (PrBP/delta), an isoprenyl-
    31 ments establish that PDEdelta functions as a prenyl-binding protein interacting with multiple prenyla
  
    33 lium through a motif near the C terminus and prenyl-binding protein phosphodiesterase 6D (PDE6D)-depe
    34 prenylated substrate, whereas the homologous prenyl-binding protein PrBP/delta did not interact with 
    35 delta (delta subunit of phosphodiesterase; a prenyl-binding protein) and INPP5E (inositol polyphospha
  
    37 protein prenyl transferases contain a single prenyl-binding site and suggests that RabGGTase transfer
  
    39 rolidine amide of 2-methoxybenzoic acid with prenyl bromide afforded (-)-vibralactone confirming the 
    40  alkylation of methyl 2-methoxybenzoate with prenyl bromide and hydrolysis of the enol ether afforded
    41 h an arylcopper intermediate is reacted with prenyl bromide to afford a key intermediate that was con
    42 -binding assay and show that RabGGTase has a prenyl carrier function similar to the CAAX prenyl trans
  
    44 and arginine residues are non-equivalent and prenyl chain length modifies nascent polybasic domain li
  
    46 ng blocks are stitched together by means of 'prenyl coupling', followed by enzymatically controlled m
  
    48 phan fluorescence of PDEdelta and dansylated prenyl cysteines as fluorescent ligands, we show that PD
  
    50  approach to complex terpenes whereby simple prenyl-derived chains are cyclized using radical, rather
    51 of downstream mevalonate products, including prenyl-derived lipids, and prevented membrane localizati
  
    53 nes from the corresponding C10, C15, and C20 prenyl diphosphate precursors, and at the gene level by 
    54 rpenoid classes is the transformation of the prenyl diphosphate precursors, geranyl diphosphate, farn
    55 S-e/f subfamily that utilize the unusual cis-prenyl diphosphate substrates neryl diphosphate and 2z,6
    56 erestingly, LOS uses alternative C15 and C20 prenyl diphosphate substrates to produce combinatorial h
  
    58 osphate is utilized by a membrane-associated prenyl diphosphate synthase activity to generate decapre
    59 d functional characterization of a novel cis-prenyl diphosphate synthase cDNA, termed Lavandula x int
  
    61 630 is the only Arabidopsis trans-long-chain prenyl diphosphate synthase that clusters with the Coq1 
    62 he product specificity of a trans-long-chain prenyl diphosphate synthase that elongates an allylic di
    63    This is the first report of a bacterial Z-prenyl diphosphate synthase that preferentially utilizes
    64  a dedicated type III polyketide synthase, a prenyl diphosphate synthase, and an aromatic prenyltrans
  
  
  
    68 In Mycobacterium tuberculosis, two related Z-prenyl diphosphate synthases, E,Z-farnesyl diphosphate s
    69 te is the allylic substrate for two distinct prenyl diphosphate synthases, one located in the cell me
    70 20-carbon prenyl group, respectively, from a prenyl diphosphate to a cysteine residue at the carboxyl
    71  processive manner to generate the 50-carbon prenyl diphosphate, which is then dephosphorylated to ge
    72 PS genes in the Solanum cluster encoding cis-prenyl diphosphate-utilizing enzymes are closely related
    73 ral conserved sequence motifs found in other prenyl-diphosphate synthases are present in both TgFPPSs
  
    75 ions in substrate specificity to utilize cis-prenyl diphosphates and through the acquisition of CPT g
    76 that use the corresponding C10, C15, and C20 prenyl diphosphates as substrates to generate the enormo
    77 te and dimethylallyl diphosphate to form C10 prenyl diphosphates that can be elongated by the additio
    78 id biosynthesis is the conversion of acyclic prenyl diphosphates to terpenoid compounds by specific t
    79 esis of monoterpenes and diterpenes from cis-prenyl diphosphates, substrates that are synthesized by 
    80  PFTase discriminates between FPP and larger prenyl diphosphates, we have examined the interactions b
  
    82 tilizes 3,3-dimethylallyl pyrophosphate as a prenyl donor and prenylates resveratrol to form arachidi
  
    84     Geranylgeranyl diphosphate (GGDP) is the prenyl donor for tocotrienol synthesis, whereas phytyl d
    85 nant LaPT1 for the dimethylallyl diphosphate prenyl donor is in a similar range to that of other flav
  
    87 el use of an iodolactone to protect both the prenyl double bond and carboxylic acid, no protecting gr
    88 ariety of acyclic or cyclic monoketones with prenyl ether-tethered aldehydes in the presence of 1,8-d
    89  cpsE gene is likely to encode the phosphate-prenyl glycosyl-1-phosphate transferase catalyzing the f
    90  is the covalent attachment of a hydrophobic prenyl group (either farnesyl or geranylgeranyl), which 
    91 , a dimer containing a gamma subunit with no prenyl group (gamma(2)-C68S) decreased binding by nearly
    92 renyl-binding pocket for the gamma subunit's prenyl group (prenyl pocket mutants) and the other set i
    93  The method utilizes simple chemistry on the prenyl group and cleavable properties of a sulfoxide gro
  
  
    96  the tail is not simply a linker between the prenyl group and the protein but that it also provides a
    97 nction is independent of the identity of the prenyl group and, therefore, that FTI inhibition of K-Ra
  
  
   100  prenyltransferases (PTases) responsible for prenyl group attachment have only recently been isolated
   101 structurally reminiscent of the binding of a prenyl group by a regulatory protein, the Rho guanine nu
  
   103 ts support the structural model in which the prenyl group escapes contact with the aqueous milieu by 
   104 ase I (GGTase I) catalyzes the transfer of a prenyl group from geranylgeranyl diphosphate to the carb
   105  product bearing different placements of the prenyl group in the A-ring have shown selectivity for ei
   106  to the incorporation of a prenyl or reverse-prenyl group into a bicyclo[2.2.2]diazaoctane framework,
  
   108 a-receptor interactions, suggesting that the prenyl group is an important domain in the beta gamma di
   109 e that a major function of the gamma subunit prenyl group is to facilitate direct protein-protein int
   110 the composition of the gamma subunit and its prenyl group markedly affects the ability of the betagam
  
  
  
  
   115 o acid sequence of the gamma subunit and its prenyl group play a role in determining the activity of 
  
  
  
  
  
   121 talyze the transfer of a 15- and a 20-carbon prenyl group, respectively, from a prenyl diphosphate to
  
  
  
  
   126 translational modification with myristoyl or prenyl groups is essential for membrane association of m
   127  was used to examine the effect of different prenyl groups on the gamma subunits in the activation of
  
   129 ral basis for the successive addition of two prenyl groups to Rab proteins by the homologous enzyme g
   130 bsence of statins and subsequent cleavage of prenyl groups with Raney nickel revealed that the enzyme
   131 ltered to direct modification with different prenyl groups, recombinant betagamma dimers expressed in
  
  
  
  
  
  
   138 his study we have identified new halogenated prenyl-indole alkaloids from an invertebrate-derived Mal
  
   140 rfamily catalyze the attachment of prenyl or prenyl-like moieties to diverse acceptor compounds.     
   141 V virion assembly is critically dependent on prenyl lipid modification, or prenylation, of its nucleo
   142  carotenoid formation and the channelling of prenyl lipid precursors in tomato (and its potential man
  
   144    Isolated PGs from k1 k3 showed a modified prenyl-lipid composition, suggesting reduced activity of
   145 C1K1/3 complex contributes to PG function in prenyl-lipid metabolism, stress response, and thylakoid 
  
   147 ctive palladium(0)-catalyzed decarboxylative prenyl migration and aromatization sequence as the key s
   148 alter the position of the post-translational prenyl modification at the C terminus of the gamma subun
  
   150   To determine the role of the gamma subunit prenyl modification in this interaction, the CaaX motifs
  
   152 s in living cells revealed that acyl but not prenyl modifications promote clustering in lipid rafts. 
   153 isoprenoid compounds involve transfer of the prenyl moiety in allylic diphosphates to electron-rich (
   154 synthetic pathways, we demonstrated that the prenyl moiety on the prenylated stilbenoids derives from
  
   156 d menaquinones, both containing an essential prenyl moiety, are key electron carriers in respiratory 
  
   158 ccurs through sequestration of the polybasic-prenyl motif by Ca2+/calmodulin (Ca2+/CaM) and subsequen
  
   160 P-MurNAc-pentapeptide (Park's nucleotide) to prenyl-MurNAc-pentapeptide (lipid I), the first membrane
   161 MATS) superfamily catalyze the attachment of prenyl or prenyl-like moieties to diverse acceptor compo
   162 equences that lead to the incorporation of a prenyl or reverse-prenyl group into a bicyclo[2.2.2]diaz
   163 f oxindoles to afford selectively either the prenyl or reverse-prenyl product has been demonstrated. 
   164 lse-labeling analyses show that formation of prenyl-pABA occurs within minutes and precedes the synth
  
   166 activity was also exquisitely sensitive to a prenyl peptide analogue that had been previously describ
  
  
  
  
   171  of the minimum structure requirement of the prenyl phosphate in the MraY/MurX-catalyzed lipid I anal
   172 is the first bacterium reported to utilize a prenyl phosphate other than undecaprenyl phosphate as th
   173 f IL-15, a T cell growth factor, to modulate prenyl phosphate-induced gamma delta T cell proliferatio
  
  
  
   177 ith the aqueous milieu by inserting into the prenyl pocket and stabilizing the Pdc-binding conformati
   178  substitution of certain residues within the prenyl pocket caused only minor decreases in binding, wh
   179 sertion of the geranylgeranyl group into the prenyl pocket in order to accurately predict the effects
  
   181 pocket for the gamma subunit's prenyl group (prenyl pocket mutants) and the other set in a domain bet
  
   183 ucted to show how the growth of a long chain prenyl product may proceed by creation of a hydrophobic 
  
  
   186  domains of life, including the type II CAAX prenyl proteases and their prokaryotic homologs with put
   187 tography of extracts from cells in which the prenyl protein pool was metabolically labeled revealed t
   188 hasis in this review is on the enzymology of prenyl protein processing and the functional significanc
  
  
  
   192 d the human RCE1 gene products are bona fide prenyl protein proteases and suggest that they play a ma
  
  
   195 reviously been shown to be recognized by any prenyl:protein transferase (PTase), but which most close
   196 pool was metabolically labeled revealed that prenyl proteins bound to the immobilized microtubules; o
   197 lying the presence of a pool of unmethylated prenyl proteins in these cells under normal conditions. 
   198 ing evidence that C-terminal modification of prenyl proteins, rather than being purely a constitutive
   199 -nonreactive TCR abrogated reactivity to the prenyl pyrophosphate Ag isopentenyl pyrophosphate and to
  
  
  
   203 , we show that gamma delta TCR reactivity to prenyl pyrophosphate Ags is dependent upon the junctiona
   204  to achieve stable association of nonpeptide prenyl pyrophosphate Ags with the presenting molecule.  
  
  
  
   208 was observed in response to stimulation with prenyl pyrophosphate antigens (isopentenyl pyrophosphate
   209  T cells are stimulated by self- and foreign prenyl pyrophosphate intermediates in isoprenoid synthes
  
  
   212 BTN3A1 proteins for their ability to mediate prenyl pyrophosphate stimulation of Vgamma2Vdelta2 T cel
  
   214 the enzymes form stable complexes with their prenyl pyrophosphate substrates, acting as prenyl carrie
   215 delta T cells are stimulated when exposed to prenyl pyrophosphate, bisphosphonate, and alkylamine Ags
  
  
  
  
   220 of HMBPP, meta/para-benzophenone-(methylene)-prenyl pyrophosphates (m/p-BZ-(C)-C(5)-OPP), can crossli
  
  
  
   224  Thus, BTN3A1 is required for stimulation by prenyl pyrophosphates but does not bind the intermediate
   225 se findings support intracellular sensing of prenyl pyrophosphates by BTN3A1 rather than extracellula
   226  features that determine the antigenicity of prenyl pyrophosphates by testing synthetic analogs for b
   227 quirements of TCR gamma delta recognition of prenyl pyrophosphates distinguish this reactivity from t
   228 at the extracellular BTN3A1 IgV domain binds prenyl pyrophosphates, leading to the proposal that the 
   229 e intracellular B30.2 domain of BTN3A1 binds prenyl pyrophosphates, resulting in a change in the extr
  
  
  
  
   234 ive to statin inhibition than stimulation by prenyl pyrophosphates; however, the continuous presence 
  
  
  
  
  
   240 sion of prenylated proteins as measured with prenyl-specific antibody, and inhibits parasite differen
  
  
  
   244 rmed by converting farnesyltransferase (15-C prenyl substrate) into GGTase-I (20-C prenyl substrate) 
  
   246 f the chiral catalyst and the stereoisomeric prenyl substrate, full control of the stereo- and enanti
   247 lgeranyl transferase inhibitor GGTI-298, and prenyl substrates (farnesyl pyrophosphate [FPP] and gera
  
   249 ture is similar to that of the bacterial cis-prenyl synthase, undecaprenyl diphosphate synthase (UPPS
  
  
  
  
  
  
  
   257  reaction is limited by a step subsequent to prenyl transfer such as release of products from the enz
   258 at are synthesized by enzymes encoded by cis-prenyl transferase (CPT) genes also located within the s
   259 roblems in cellular isoprenoid metabolism or prenyl transferase activity were investigated, but none 
  
   261 Ad, and its crystal structure revealed a cis-prenyl transferase fold with hydrophobic residues for is
   262 e critical structural properties determining prenyl transferase specificity and in metabolic engineer
   263 e sensitivity to existing drugs, and the cis-prenyl transferase undecaprenyl diphosphate synthase (UP
   264  prenylation of K-Ras by the closely related prenyl transferase, geranyl geranyl transferase I, and t
   265 ns of the protein structure indicated that a prenyl-transferase domain and several transmembrane heli
   266 erculosinol adenosine synthase and other cis-prenyl transferases (e.g. cis-farnesyl, decaprenyl, unde
   267  as to the mechanism of action of many other prenyl transferases and may also be of use in engineerin
   268 mechanism and inhibition of the head-to-head prenyl transferases and should aid future drug design.  
   269 s generated considerable interest in protein prenyl transferases as possible anticancer targets.     
   270 his study establishes that all three protein prenyl transferases contain a single prenyl-binding site
   271  progress has been made in understanding how prenyl transferases distinguish between related target p
  
   273 om C(5) precursors; the epsilon head-to-head prenyl transferases that convert these diphosphates into
   274 terpene synthases; the zeta head-to-tail cis-prenyl transferases that produce the cis-isoprenoid diph
   275 alphaalpha and alphadelta head-to-tail trans-prenyl transferases that produce trans-isoprenoid diphos
  
  
   278 ket distinguishes Rv3378c from classical cis-prenyl transferases, providing a unique model for the pr
  
   280 l-CoA, carbamoyl-P), methyl transfers (SAM), prenyl transfers (IPP), glucosyl transfers (UDP-glucose)
   281     This rearrangement may be conducted with prenyl-type selenosulfides to give isoprenyl alkyl sulfi
   282   Lipid I isolated from Mtb contains the C50-prenyl unit that shows very poor water solubility; thus,
   283  a noncanonical route to the construction of prenyl units and serves as a prototype for the intersect
  
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