ライフサイエンスコーパス: prokaryote

1 en obtained via lateral gene transfer from a prokaryote.

2 e modules that are ubiquitous in free-living prokaryotes.

3 ve and inducible promoters in eukaryotes and prokaryotes.

4 the first documentation of this activity in prokaryotes.

5 nd fungi, but remain largely unidentified in prokaryotes.

6 mins as it is biosynthesized only by certain prokaryotes.

7 modes of gradient sensing in eukaryotes and prokaryotes.

8 rs that are widely distributed in plants and prokaryotes.

9 prototype of patterning and morphogenesis in prokaryotes.

10 systems mediate adaptive immunity in diverse prokaryotes.

11 in plants, animals, and humans and later in prokaryotes.

12 e system against foreign genetic elements in prokaryotes.

13 the importance of stygofauna as vectors for prokaryotes.

14 nt protein remodeling in both eukaryotes and prokaryotes.

15 remediating, water purifying and pathogenic prokaryotes.

16 icant rise of sequencing projects, mainly in prokaryotes.

17 over a few days to account for about 40% of prokaryotes.

18 he dominant mode of extracellular sensing in prokaryotes.

19 4 plants and green algae but is not found in prokaryotes.

20 sodium channels that are widely expressed in prokaryotes.

21 eading to a disperse distribution pattern in prokaryotes.

22 -Cas systems silence plasmids and viruses in prokaryotes.

23 e order, yet they are not typically found in prokaryotes.

24 es independently amongst both eukaryotes and prokaryotes.

25 te fungi associated with wood decay and from prokaryotes.

26 es for t(6)A synthesis are essential in most prokaryotes.

27 adaptive immunity against viral infection in prokaryotes.

28 looping is important for gene repression in prokaryotes.

29 e preserved from archaea to human pathogenic prokaryotes.

30 y-dependent, membrane-associated function in prokaryotes.

31 mostly eukaryotes to mostly nitrogen-fixing prokaryotes.

32 es in the post-transcriptional regulation in prokaryotes.

33 in stability in the cytosolic compartment of prokaryotes.

34 sphatase signaling networks that function in prokaryotes.

35 eukaryotic cells evolved from endosymbiotic prokaryotes.

36 controlling Mg(2+) uptake and homeostasis in prokaryotes.

37 he crucial focal point of gene expression in prokaryotes.

38 omic patterns of cis-regulatory evolution in prokaryotes.

39 independently in cyanobacteria versus other prokaryotes.

40 and the local-concurrent chromosome cycle of prokaryotes.

41 m and could therefore be a common feature in prokaryotes.

42 xin-antitoxin (TA) systems are widespread in prokaryotes.

43 urprisingly different between eukaryotes and prokaryotes.

44 covery of homologues of tubulin and actin in prokaryotes.

45 tured representative deep-sea methanotrophic prokaryotes.

46 e present in diverse cells of eukaryotes and prokaryotes.

47 ected glycerophospholipids in eukaryotes and prokaryotes.

48 nder polygenic lineage-specific selection in prokaryotes.

49 are no more bioenergetically efficient than prokaryotes.

50 widely used for orthology identification in prokaryotes.

51 ish an RNA-based adaptive immunity system in prokaryotes.

52 kable dynamic filaments nearly ubiquitous in prokaryotes.

53 thesis of adenosylcobalamin (AdoCbl) in many prokaryotes.

54 re thought to have originated as free-living prokaryotes.

55 ever, such a mechanism remains unexplored in prokaryotes.

56 des a barrier to horizontal gene transfer in prokaryotes.

57 n into bioavailable ammonium in diazotrophic prokaryotes.

58 y microalgae acquire vitamin B12 from marine prokaryotes.

59 ing our knowledge across the whole domain of prokaryotes.

60 al system of self/non-self discrimination in prokaryotes [1], which protects hosts from exogenous DNA

61 tion is ultimately consumed by heterotrophic prokaryotes(2).

62 In prokaryotes a single factor binds each origin, whereas i

63 d an analogous elemental milieu and harbored prokaryotes affiliated with fifty-nine phyla, among whic

64 CRISPR-Cas systems defend prokaryotes against bacteriophages and mobile genetic el

65 an adaptive immune system that protects the prokaryotes against exogenous genetic elements such as p

66 ssociated) is a defense system that protects prokaryotes against foreign DNA.

67 codes an adaptive immune system that defends prokaryotes against infectious viruses and plasmids.

68 fence systems known to be at the disposal of prokaryotes against their viruses.

69 Type III-A CRISPR-Cas systems defend prokaryotes against viral infection using CRISPR RNA (cr

70 CRISPR-Cas systems defend prokaryotes against viruses and plasmids.

71 Prokaryotes also produce CDNs, but these are exclusively

72 Dominant prokaryotes also varied rapidly.

73 NA-directed immune systems are found in most prokaryotes, an opportunity exists to harness the endoge

74 To anticipate such daily cycles, prokaryote and eukaryote free-living organisms evolved i

75 natural products that are biosynthesized by prokaryote and eukaryote marine organisms.

76 han 55,000 organisms (>4800 viruses, >40,000 prokaryotes and >10,000 eukaryotes; RefSeq release 71),

77 that bifurcates to favor direct tunneling in prokaryotes and a two-step hopping mechanism in eukaryot

78 Adaptive immune systems in prokaryotes and animals give rise to long-term memory th

79 ilaments are frequent in both eukaryotes and prokaryotes and are involved in vital cellular processes

80 esponding to group II RNAs are found in many prokaryotes and are particularly prevalent within plants

81 ed short palindromic repeat (CRISPR) loci in prokaryotes and by V(D)J recombination of immunoglobulin

82 are the most abundant signalling pathways in prokaryotes and control a wide range of biological proce

83 mportant for CRISPR spacer uptake in diverse prokaryotes and CRISPR-Cas systems.

84 there is a long-standing effort to search in prokaryotes and eukarya for proteins promoting HJ migrat

85 osed as part of defense systems that protect prokaryotes and eukaryotes against the proliferation of

86 They are expressed ubiquitously in both prokaryotes and eukaryotes and are subdivided into 25 th

87 rence Sequence (RefSeq) genomes for viruses, prokaryotes and eukaryotes are the primary foundation fo

88 from 9282 complete genome chromosomes of all prokaryotes and eukaryotes available at NCBI, we observe

89 th quorum sensing and 'community effects' in prokaryotes and eukaryotes can be drawn, arguing that a

90 tant implications for signal transduction in prokaryotes and eukaryotes due to conservation of aromat

91 me-copper oxidases (HCOs) are key enzymes in prokaryotes and eukaryotes for energy production during

92 e the intrinsic growth rates of phototrophic prokaryotes and eukaryotes from the equatorial to temper

93 mming from the earliest interactions between prokaryotes and eukaryotes have evolved to mediate micro

94 ology-directed repair (HDR) pathways in both prokaryotes and eukaryotes in different contexts.

95 is a widespread lipophilic molecule in both prokaryotes and eukaryotes in which it primarily acts as

96 nsmembrane receptors (7TMRs) have evolved in prokaryotes and eukaryotes over hundreds of millions of

97 Although prokaryotes and eukaryotes possess canonical TLS polymer

98 Comparing essential domains in prokaryotes and eukaryotes revealed an evolutionary dist

99 d our ability to study the transcriptomes of prokaryotes and eukaryotes separately, limitations in ex

100 droplets (LDs) are ubiquitous organelles in prokaryotes and eukaryotes that play a key role in cellu

101 Total loads of airborne prokaryotes and eukaryotes were estimated at 2.2 x 10(21

102 g examples of HGT among prokaryotes, between prokaryotes and eukaryotes, and even between multicellul

103 GyrI-like proteins are widely distributed in prokaryotes and eukaryotes, and recognized as small-mole

104 id intermediate for several pathways in both prokaryotes and eukaryotes, being produced by CDP-DAG sy

105 In prokaryotes and eukaryotes, cell-cell communication and

106 olution mechanisms that are employed in both prokaryotes and eukaryotes, including how deregulating S

107 In both prokaryotes and eukaryotes, insight into gene function i

108 In both prokaryotes and eukaryotes, MutS homologs undergo confor

109 In both prokaryotes and eukaryotes, the DeltaG value of the most

110 AH) domain-containing proteins occur in both prokaryotes and eukaryotes, where they carry out diverse

111 proteins that store copper in the cytosol of prokaryotes and eukaryotes, where this reactivity is als

112 ABC exporters are present both in prokaryotes and eukaryotes, with examples implicated in

113 represent a promising genome editing tool in prokaryotes and eukaryotes.

114 emergence of lineage-specific traits in both prokaryotes and eukaryotes.

115 lets of closely related species from diverse prokaryotes and eukaryotes.

116 t have important physiological roles in both prokaryotes and eukaryotes.

117 fication in the metabolic regulation of both prokaryotes and eukaryotes.

118 sphatidylethanolamine in numerous species of prokaryotes and eukaryotes.

119 sses, and it is widely conserved across both prokaryotes and eukaryotes.

120 e genome-wide studies of IR patterns in both prokaryotes and eukaryotes.

121 pivotal for governing RNA lifetimes in both prokaryotes and eukaryotes.

122 of intracellular ion concentrations in both prokaryotes and eukaryotes.

123 its metabolic capabilities uncharacterized, prokaryotes and fungi have the potential to act as mutua

124 he Fluc family of F(-) ion channels protects prokaryotes and lower eukaryotes from the toxicity of en

125 ring winter, showed that vertical patches of prokaryotes and microplankton developed and persisted fo

126 ical transitions apply to both single-celled prokaryotes and multicellular eukaryotes.

127 hroughout eukaryotes and are present in some prokaryotes and orthopoxviruses.

128 SPR-Cas systems provide adaptive immunity in prokaryotes and promising gene-editing tools from bacter

129 other HPP superfamilies known previously in prokaryotes and resembles myo-inositol monophosphatases

130 hrough independent horizontal transfers from prokaryotes and that expansion by gene duplication led t

131 that is exclusive to oxygenic photosynthetic prokaryotes and that is based on the primary sequence th

132 d our understanding of the interplay between prokaryotes and their environment, and CRISPR-based mole

133 sic principles of DNA damage repair (DDR) in prokaryotes and unicellular and multicellular eukaryotes

134 e lipoylated has been extensively studied in prokaryotes and yeast (Saccharomyces cerevisiae), but li

135 was further identified from both Plantae and prokaryotes and, together with site-directed mutagenesis

136 ms (TCS) are the main signalling pathways of prokaryotes, and control a wide range of biological phen

137 served in the genomic DNA of bacteriophages, prokaryotes, and eukaryotes that play a role in restrict

138 esses routinely interfere with each other in prokaryotes, and mounting evidence now suggests that RNA

139 undant, mostly novel sequences from viruses, prokaryotes, and picoeukaryotes.

140 of stochastic mRNA:ncRNA interactions across prokaryotes, and that these have a greater impact on pro

141 re found ubiquitously in both eukaryotes and prokaryotes, and they comprise the largest of all of the

142 f eukaryotes alongside more rapidly evolving prokaryotes, archaea, and viruses posed immunological ch

143 The CRISPR-Cas systems in prokaryotes are RNA-guided immune systems that target an

144 cyanobacteria occupy a unique position among prokaryotes as a hub between anaerobes and obligate aero

145 judged to have achieved greater success than prokaryotes as a whole.

146 These systems evolved within prokaryotes as adaptive immune defenses to target and de

147 sitol in eukaryotes or inositol phosphate in prokaryotes as the acceptor alcohol.

148 roduce antibacterials, which have evolved in prokaryotes as the result of eons of interbacterial comp

149 es may have similar functional properties in prokaryotes as they do in eukaryotes.

150 mans, and analogous machineries are found in prokaryotes as well.

151 The "hitch-hiking" prokaryotes associated with stygofauna may be up to 5 or

152 ryotes for regulation of kinases, however in prokaryotes auto-phosphorylation of number of kinases ha

153 Here, we show that fumarase of the model prokaryote Bacillus subtilis (Fum-bc) is induced upon DN

154 Whether prokaryotes (Bacteria and Archaea) are naturally organiz

155 fter a month of operation, the most-abundant prokaryote belonged to an uncharacterized clade of Chlor

156 the web of life using examples of HGT among prokaryotes, between prokaryotes and eukaryotes, and eve

157 CRISPR-Cas adaptive immune systems in prokaryotes boast a diversity of protein families and me

158 luding tsaC and tsaD, are essential in model prokaryotes but not essential in yeast.

159 ine phosphorylation is well characterized in prokaryotes but poorly understood in eukaryotes.

160 oteome consists of proteins with homologs in prokaryotes, but without a robust phylogenetic signal af

161 CRISPRs offer adaptive immunity in prokaryotes by acquiring genomic fragments from infectin

162 espiratory electron transport system of some prokaryotes by shuttling electrons between membrane-boun

163 Prokaryotes, by definition, do not segregate their genet

164 fic metabolic and pathological phenotypes in prokaryotes can be predictable from current genomes.

165 ated (PA) fraction, operationally defined as prokaryotes captured on 2.7 microm membranes.

166 rginine translocation (Tat) system, found in prokaryotes, chloroplasts, and some mitochondria, allows

167 transporters for vitamins and metal ions in prokaryotes consist of two ATP-binding cassette-type ATP

168 LOX of animals, plants, and prokaryotes contain iron as the catalytic metal, whereas

169 cally, progressive chromosome segregation in prokaryotes demands a single duplicon per chromosome, wh

170 howed P. persalinus has acquired many unique prokaryote-derived genes that potentially contribute to

171 advance our understanding of the strategies prokaryotes employ to regulate cellular processes relate

172 Quorum-sensing systems, common in prokaryotes, enable bacteria to coordinately regulate be

173 Prokaryotes encode adaptive immune systems, called CRISP

174 Using 139 prokaryote-enriched samples, containing >35,000 species,

175 in Dictyostelium as a novel model system for prokaryote-eukaryote interactions.

176 by discoveries that fill in the gaps of the prokaryote:eukaryote "discontinuity." Second, eukaryogen

177 nd explore its consequences for the study of prokaryote evolution.

178 In prokaryotes, evolutionary innovation frequently happens

179 Although prokaryotes evolved at least 3 billion years before plan

180 Prokaryotes evolved CRISPR-mediated adaptive immune syst

181 This reshaping removes the role of C-Ala in prokaryotes for docking tRNA and instead repurposes it t

182 for 58 of the 121 large protein families in prokaryotes for which three-dimensional structures are n

183 oss of defense genes during the evolution of prokaryotes; formation of genomic defense islands; evolu

184 is an RNA-guided immune system that protects prokaryotes from invading genetic elements.

185 CRISPR-Cas immune systems protect prokaryotes from viral and plasmid infection utilizing s

186 CRISPR-Cas systems protect prokaryotes from viruses and plasmids and function prima

187 f fundamental importance to the evolution of prokaryote genomes and has important practical consequen

188 central to the architecture and evolution of prokaryote genomes.

189 ation that extremely large viruses infecting prokaryotes (giant phages) can be found in many environm

190 In prokaryotes, green algae, and most plants, this enzyme i

191 th and quorum sensing are direct examples of prokaryote group behaviors, wherein cells coordinate the

192 Nearly every prokaryote has an ars (arsenic resistance) operon, and s

193 Prokaryotes have aerobic and anaerobic electron acceptor

194 imal and plant P4Hs target peptidyl proline, prokaryotes have been known to use free l-proline as a p

195 viruses have been widely studied, those from prokaryotes have received only limited attention.

196 Recent single-cell studies in prokaryotes have uncovered the adder principle, where ce

197 eukaryotes and the cytoskeletal polymers of prokaryotes have yielded new insights due to recent adva

198 ds, which are well-studied drivers of HGT in prokaryotes, have been reported previously in red algae

199 Almost all organisms, from eukaryotes to prokaryotes, have evolved enzymes to make and break thes

200 acterization of five previously unidentified prokaryote homologs with high sequence similarity (24-32

201 f acetylcholine receptors, ion channels from prokaryote homologs-Erwinia chrysanthemi ligand-gated io

202 In prokaryotes, however, the vertical signal is partly obsc

203 ish the distinctive roles played by abundant prokaryotes in cobalamin-based microbial interdependenci

204 likely more susceptible to genotoxicity than prokaryotes in the ecosystem when exposed to these ENMs.

205 Since many prokaryotes, including Escherichia (E.) coli, generate H

206 which is synthesized de novo only by certain prokaryotes, including the majority of cyanobacteria.

207 ight be expected, taxonomic biases for donor prokaryotes indicate that shared habitat is a major fact

208 Regulation of gene expression in prokaryotes involves complex co-regulatory mechanisms in

209 most common membrane constriction system in prokaryotes is based on the tubulin homologue FtsZ, whos

210 tabolic processes, although only a subset of prokaryotes is capable of synthesizing B12 and other cob

211 d sequentially, suggesting that evolution in prokaryotes is governed by functional assembly patterns.

212 Cell division in most prokaryotes is mediated by FtsZ, which polymerizes to cr

213 the helicases that resolve G4 structures in prokaryotes is poorly understood.

214 als, we find that the information content of prokaryotes is similar to plants and animals at the pres

215 ormation on environmentally relevant pelagic prokaryotes is still limited.

216 A paradigm among prokaryotes is the chemotaxis system, which allows bacte

217 CorA, the major Mg(2+) uptake system in prokaryotes, is gated by intracellular Mg(2+) (KD approx

218 In most prokaryotes, it is formed from the condensation of dihyd

219 OP via an ATP-dependent 5-oxoprolinase; most prokaryotes lack homologs of this enzyme (and the gamma-

220 Eukaryotes and prokaryotes last shared a common ancestor 2 billion yea

221 m, Local Distribution of Short Sequences for Prokaryotes (LDSS-P), to identify conserved short motifs

222 ions between NusG/Spt5 and RNA polymerase in prokaryotes, little is known about how the binding of eu

223 In contrast to prokaryotes, many eukaryotic RPs possess long extensions

224 Despite the typical absence of IPs in prokaryotes, many of these organisms express IPases (or

225 In prokaryotes, members of the High Temperature Requirement

226 omplex and also the first such analysis of a prokaryote membrane fusion system.

227 Clp proteases are found in prokaryotes, mitochondria, and plastids where they play

228 In prokaryotes, modified bases appear primarily to be part

229 ty against invasive mobile genetic elements, prokaryotes must first integrate fragments of foreign DN

230 s in the two conserved Higher Eukaryotes and Prokaryotes Nucleotide-binding (HEPN) domains, mutations

231 Prokaryotes often reside in groups where a high degree o

232 m Thaumarchaeota are among the most abundant prokaryotes on Earth and are widely distributed in marin

233 major eukaryotic organism groups but not in prokaryotes or chordates.

234 nds of rearrangements in wild-type or mutant prokaryotes or lower eukaryotes such as yeast.

235 These data indicate that a prokaryote, P. aeruginosa, in a ligand-specific manner,

236 analyze a dynamical model of CRISPR-mediated prokaryote-phage coevolution that incorporates classical

237 A typical prokaryote population sequencing study can now consist o

238 Eukaryotes and prokaryotes possess fatty acid synthase (FAS) biosynthet

239 Sequence alignments of promoters in prokaryotes postulated that the frequency of occurrence

240 Diverse prokaryotes produce gene transfer agents (GTAs), which a

241 ion factor, eEFSec in eukaryotes and SelB in prokaryotes, promotes selenocysteine incorporation into

242 In prokaryotes, protein-based compartments are used to sequ

243 Genome packing in viruses and prokaryotes relies on positively charged ions to reduce

244 In prokaryotes, RNA polymerase and ribosomes can bind concu

245 nstruction of the pan genome of thousands of prokaryote samples possible on a standard desktop withou

246 In prokaryotes, segregation starts with the newly replicate

247 Cyanobacteria are photosynthetic prokaryotes showing great promise as biocatalysts for th

248 ibution of the lactate racemase system among prokaryotes, showing the high significance of both lacta

249 In prokaryotes, small noncoding RNAs (snRNAs) of 50-500 nt

250 ve different anaerobic metabolic pathways to prokaryotes such as bacteria and archaea.

251 Rubisco is a strategy used by photosynthetic prokaryotes such as cyanobacteria for more efficient inc

252 plays a key role in the iron homeostasis of prokaryotes, such as bacterial pathogens, but the molecu

253 higher eukaryotes but absent from yeast and prokaryotes suggesting its role as a thermal and kinetic

254 anobacteria are Gram-negative photosynthetic prokaryotes that are widespread on Earth.

255 Cyanobacteria are photosynthetic prokaryotes that make major contributions to the product

256 plants develop opportunistic mutualisms with prokaryotes that solve context-dependent ecological prob

257 In prokaryotes, the drive for translocation comes from ATP

258 In contrast to the DNA-based viruses in prokaryotes, the emergence of eukaryotes provided the ne

259 Among prokaryotes, the long eukaryotic version is only observe

260 are critical sensors of external stimuli in prokaryotes, the mechanisms by which their sensor domain

261 Although extensively studied in prokaryotes, the prevalence and significance of DNA N(6)

262 ements, e.g., the Shine-Dalgarno sequence in prokaryotes, the rRNA-binding site in the HCV IRES funct

263 mechanism affecting genome rearrangements in prokaryotes, the symmetrical inversions around the origi

264 e and spread of an important group of marine prokaryotes, the vibrios, which are responsible for seve

265 For the prokaryotes these are strains submitted to the culture c

266 modifications differ between eukaryotes and prokaryotes; thus, they can serve to define the innate p

267 Type II REases are produced by prokaryotes to combat bacteriophages.

268 etter understand the functional responses in prokaryotes to dissolved organic matter (DOM), we compar

269 extensively, the evolutionary rise of these prokaryotes to ecological dominance in many habitats rem

270 y implicate lateral gene transfer, both from prokaryotes to eukaryotes and among eukaryotes, as a sou

271 a direct, causal role in the transition from prokaryotes to eukaryotes and the subsequent explosive d

272 or m(6)A) is a DNA modification preserved in prokaryotes to eukaryotes.

273 The enzyme is highly conserved from prokaryotes to humans and yet phylogenetic evidence sugg

274 rminal domain (C-Ala) that is conserved from prokaryotes to humans but with a wide sequence divergenc

275 nases (ROXs) occur in organisms ranging from prokaryotes to humans raises questions as to their struc

276 erived from a diverse range of species, from prokaryotes to humans, with a mechanism of action that o

277 ome size distributions in multiple groups of prokaryotes to predictions of mathematical models of pop

278 ental change in J-protein biology during the prokaryote-to-eukaryote transition allows for increased

279 The origin of the nucleus at the prokaryote-to-eukaryote transition represents one of the

280 Recombination in prokaryotes (transduction, conjugation, transformation)

281 ogether, all these findings indicate that in prokaryotes, translation start signals are subject to we

282 In many prokaryotes, type III clustered regularly interspaced sh

283 fate of RNA in eukaryotes; however, whether prokaryotes use RNA spatial organization as a mechanism

284 Prokaryotes use subcellular compartments for a variety o

285 e evolutionary impact of such constraints in prokaryotes, using probabilistic ancestral reconstructio

286 y of lipid phosphate phosphatase proteins in prokaryotes versus eukaryotes.

287 ein structures from two eukaryotes and three prokaryotes, we explore the connections between the prot

288 sed on the knowledge about the role of PG in prokaryotes, we hypothesize that the synthesis of Chl an

289 nts has bombarded nuclei since the ancestral prokaryotes were engulfed by a precursor of the nucleate

290 Unlike other prokaryotes where the enzyme producing beta-alanine from

291 en a powerful tool for uncovering biology in prokaryotes, where whole-genome saturating screens have

292 nique glycosidic linkages, particularly from prokaryotes, which are resistant to enzymatic or chemica

293 t little is known of its influence on marine prokaryotes, which represent the largest living biomass

294 ong-standing importance of the Psp system in prokaryotes, while inter- and intra-phyla variations wit

295 ke up RNA-guided, adaptive immune systems in prokaryotes whose effector proteins have become powerful

296 s between an ancient, obligate endosymbiotic prokaryote with its obligate plant-symbiotic fungal host

297 CRISPR-Cas systems provide prokaryotes with adaptive defense against bacteriophage

298 allic nodules provide a suitable habitat for prokaryotes with an abundant and diverse prokaryotic com

299 l code exist, particularly in organelles and prokaryotes with small genomes, they are limited in scop

300 However, unlike in prokaryotes, yeasts, and plants, the molecular players i