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1 efit of incorporating functional linkages in protein annotation.
2 MBL section, is the preeminent storehouse of protein annotation.
3 isualizing the relationships between complex protein annotations.
4 D) to enhance the depth and accessibility of protein annotations.
5 s, this method requires no predefined ORF or protein annotations.
6 for statistically significant enrichment of protein annotations.
7 mation, including sequence records, gene and protein annotations, 3D protein structures, immune epito
8 earches of this database can be conducted by protein annotation, accession number, PDB ID, organism n
9 rches InterPro and displays profile matches (protein annotations) alongside gene models, exposing how
12 sensible propagation and standardization of protein annotation and the systematic detection of annot
15 es, such as immunofluorescence microscopy or protein annotations and sequences, which represent a ric
18 owing them to gain an integrated overview of protein annotations available to aid their knowledge gai
20 ordinates on manually reviewing inconsistent protein annotations between sites, as well as annotation
21 stical method that enables robust, automated protein annotation by reliably expanding existing annota
22 ontologies have been developed for gene and protein annotation, by using a dataset of both manually
25 ed by BLAST homology searches of four public protein annotation databases and four plant proteomes (A
26 , that exploits the ontological structure of protein annotation databases in a principled manner, can
28 dependent analyses improve virion-associated protein annotations, facilitate the investigation of pro
30 ractical resource for a quick sequence-based protein annotation for molecular biologists, e.g., for i
31 es an efficient method to aggregate gene and protein annotation for researchers and is available at h
32 ariants, we developed ProtAnnot, which shows protein annotations in the context of genomic sequence.
33 identifications, absolute quantification of proteins, annotation of coding sequences in genomes, and
34 iated metadata, predictions of novel variant proteins, annotations of phenotype-associated sequence m
35 ing sequence (CCDS) project tracks identical protein annotations on the reference mouse and human gen
37 roduce a genome-scale approach to functional protein annotation--phylogenomic mapping--that requires
40 data, we have also incorporated a variety of protein annotation resources, including protein-protein
42 virDB is annotated using our fully automated protein annotation system and is linked to that system's
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