ライフサイエンスコーパス: protein sequence database

1 many novel genes with no homologs in current protein sequence database.

2 milarity between peptide MS/MS spectra and a protein sequence database.

3 mass spectrometry coupled to searching of a protein sequence database.

4 eme for comparing tandem mass spectra with a protein sequence database.

5 racellular modules found in the nonredundant protein sequence database.

6 tion matrices derived from the non-redundant protein sequence database.

7 database that is created based on the target protein sequence database.

8 in the public domain, the PIR-International Protein Sequence Database.

9 notations appearing in the PIR-International Protein Sequence Database.

10 on of families of duplication modules from a protein sequence database.

11 he AT-hook motifs present in a non-redundant protein sequence database.

12 sive, quality controlled, and well-organized protein sequence database.

13 dundant, well-organized and freely available protein sequence database.

14 es represented in the INSDC's nucleotide and protein sequence databases.

15 formation contained in the rapidly expanding protein sequence databases.

16 homologous information for it from existing protein sequence databases.

17 are identified using BLASTx searches against protein sequence databases.

18 0 to make it applicable to the management of protein sequence databases.

19 strategies for building and using customized protein sequence databases.

20 improving the annotation of GPCRs stored in protein sequence databases.

21 s spectrometry coupled with searching of the protein sequence databases.

22 ormation contained in prokaryotic genome and protein sequence databases.

23 e query nucleotide sequence against selected protein sequence databases.

24 s by correlation of tandem mass spectra with protein sequence databases.

25 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome a

26 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome a

27 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome m

28 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

29 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

30 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

31 that integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

32 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

33 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

34 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

35 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

36 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

37 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

38 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

39 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

40 which integrates data from the major DNA and protein sequence databases along with taxonomy, genome,

41 ez, incorporates data from the major DNA and protein sequence databases, along with genome maps and p

42 iquely identifying human apotransferrin in a protein sequence database, an example of the use of this

43 rimental spectrum against a combination of a protein sequence database and a spectral library.

44 (M + H)+ value (at some mass tolerance) in a protein sequence database and an experimental tandem mas

45 oteome is an object-relational mitochondrial protein sequence database and annotation system.

46 equence similarity and text searching of the Protein Sequence Database and auxiliary databases.

47 The PIR-International Protein Sequence Database and other files are also avail

48 The PIR-International Protein Sequence Database and other files are also avail

49 al, and knowledge discovery by providing the Protein Sequence Database and other supplementary databa

50 litates classification-driven annotation for protein sequence databases and complete genomes, and sup

51 with regularly updated versions of the main protein sequence databases and is backed up by significa

52 Despite the explosive growth of protein sequence databases and the vast numbers of seque

53 Our study shows that, where large protein sequence databases are available from genomic st

54 searches of the NCBI and EMBL non-redundant protein sequence databases are available from the BCM Se

55 Protein sequence databases are the pillar upon which mod

56 rc) is the most comprehensive, non-redundant protein sequence database available.

57 The weekly release of the Protein Sequence Database can be accessed through the PI

58 A search of protein sequence databases confirms that synuclein-like

59 ct ion spectra against a partially annotated protein sequence database, coupled with a novel scoring

60 The protein sequence databases do not distinguish between pr

61 The PIR Protein Sequence Database entries are classified into su

62 in Information Resource (PIR) and SWISS-PROT protein sequence database feature table annotations, str

63 Searching a protein sequence database for homologs is a powerful too

64 used to search computerized peptide mass and protein sequence databases for known proteins.

65 The rapidly accumulating protein sequence databases from genome, metagenome and m

66 ics: (i) generation of customized, annotated protein sequence databases from RNA-Seq data; and (ii) a

67 ify novel peptides (not present in reference protein sequence databases) from mass spectrometry-based

68 imilar analysis on subsets of a nonredundant protein sequence database generated from the full databa

69 In this approach, customized protein sequence databases generated using genomic and t

70 From its origin the Protein Sequence Database has been designed to support r

71 The size of the protein sequence database has been exponentially increas

72 Since 1988, the Protein Sequence Database has been maintained collaborat

73 The exponential growth of protein sequence databases has increasingly made the fun

74 eviously in animals, interrogation of animal protein sequence databases identified candidates that ex

75 Sequence Database (PSD), the major annotated protein sequence database in the public domain, containi

76 he most comprehensive and expertly annotated protein sequence database in the public domain, the PIR-

77 s the largest, most comprehensive, annotated protein sequence database in the public domain, the PIR-

78 ic and physical maps with the nucleotide and protein sequence databases in a fashion that should spee

79 secondary ion mass spectra are compared with protein sequence databases in order to identify the amin

80 lso maintains and distributes the SWISS-PROT Protein Sequence database, in collaboration with Amos Ba

81 in the public domain, the PIR-International Protein Sequence Database, in collaboration with the Mun

82 The recent rapid growth of protein sequence databases is outpacing the capacity of

83 Sequences (MIPS) and the Japan International Protein Sequence Database (JIPID).

84 A regularly updated non-redundant protein sequence database (nrdb90), a server for homolog

85 PIR maintains the Protein Sequence Database (PSD), an annotated protein da

86 base (JIPID), produces the PIR-International Protein Sequence Database (PSD), the major annotated pro

87 With these VIPs, one can scan protein sequence databases rapidly to seek binding partn

88 It compared the performance of a full protein sequence database (RSDB100) with a non-redundant

89 Protein sequence database search programs may be evaluat

90 It plays an important role in protein sequence database search, protein structure pred

91 ized peptides often allow far more selective protein sequence database searches than those obtained f

92 A screen of protein sequence databases showed an exact match of seve

93 organisms because of the lack of appropriate protein sequences databases, thus restricting the analys

94 server interface allows a range of different protein sequence databases to be searched including the

95 ips among sequences in the PIR-International Protein Sequence Database, to spread and standardize pro

96 and FASTY, which compare a DNA sequence to a protein sequence database, translating the DNA sequence

97 We present three clustered protein sequence databases, Uniclust90, Uniclust50, Unic

98 By searching the current protein sequence databases using sequences from human an

99 We searched the Drosophila protein sequences database using fully characterized ins

100 dardized annotation in the PIR-International Protein Sequence Database was large and steadily increas

101 The patterns found in a protein sequence database were used to create decoy data

102 The suffix tree is used to preprocess the protein sequence database, while the spectrum graph is u

103 e uninterpreted product ion spectrum against protein sequence databases with varying degrees of annot