ライフサイエンスコーパス: psi

1 psi-Values are zero or unity for all sites except one at

2 ens offset (-5 V), auxiliary gas pressure (0 psi), and isolation width of parent ion (m/z value = 3).

3 As expected, digestion efficiency at 10,000 psi was increased and reproducibly produced more peptic

4 rolonged, continuous high-pressure at 10,000 psi.

5 rformed at pressures up to 6900 bar (100,000 psi), consumes a large sample volume and is very irrepro

6 iquid chromatography at approximately 11,000 psi on sub 2-microm particles combined with reversed-pha

7 essures up to approximately 1000 bar (15,000 psi).

8 200 nL and operated at approximately 20,000 psi (1380 bar), the system showed a peak area reproducib

9 of withstanding pressures beyond the 20,000 psi (1380 bar).

10 ed by high pressure homogenization at 25,000 psi.

11 L) and operated at pressures close to 30,000 psi (2070 bar), the reproducibility in peak area for the

12 c pressure to 2000 bar (approximately 30,000 psi) at 25 degrees C.

13 ate at pressures as high as 2070 bar (30,000 psi) was evaluated for UHPLC.

14 ed at a pressure as high as 2070 bar (30,000 psi).

15 2-microm packing materials, a 30,000-40,000 psi (2070-2760 bar) pressure range is desirable.

16 rated to withstand pressures of up to 40,000 psi (2760 bar) has been evaluated.

17 ment compared with hydrodynamic injection (1 psi, 10 s).

18 (i)) and the psi angle of the residue i - 1 (psi(i-1)) on the 0.1 ps time scale.

19 d S8 under near-ambient conditions (e.g., 10 psi, 25 degrees C).

20 system that operates at low pressures (< 10 psi).

21 At low pressures (<10 psi), elevated indicator bacteria were frequently detect

22 gh pressure [>20 psi], low pressure [5 to 10 psi], or very low pressure [1 to 2 psi]) and one of two

23 bient pressure could withstand more than 100 psi without failure.

24 re unchanged even to 120 degrees C under 100 psi of O2 and in the presence of active radical chains (

25 ucted by reacting 2(TFE)-(13)C with 300-1000 psi of methane in single-crystal sapphire NMR tubes; cle

26 (CH3CN)2 from voltammograms recorded at 1000 psi of H2.

27 ore peptic peptides versus digestion at 1000 psi.

28 From 40 to 120 psi, both regioisomer (b:l) and enantiomer (R:S) ratios

29 3 Sprague Dawley adult rats to unilateral 14 psi blast exposure to induce tinnitus and measured audit

30 ontrolled apparatus at 40 degrees C and 1400 psi (9.65 MPa).

31 ross fitting and can withstand at least 1400 psi.

32 , a pressure drop of only approximately 1500 psi is sufficient to maintain an effluent flow rate of <

33 troller and could hold up to 1100 bar (16000 psi) of pressure.

34 At pressures between 10 and 17 psi, evidence of periodic contamination suggested that t

35 ith a chlorine residual and at pressures >17 psi.

36 Using a 2 min injection with 18 psi counter-pressure, 50% of the cells injected into the

37 eins at pressure gradients of 12 bar/cm (180 psi/cm) has been performed using a microdevice that inte

38 [5 to 10 psi], or very low pressure [1 to 2 psi]) and one of two irrigation solutions (castile soap

39 ll 400 mum holes in carbon steel pipes at 20 psi self-repaired at pH 4.0-11.0.

40 Similar leaks in carbon steel pipes at 20 psi self-repaired at pH 5.5 and 8.5, but two leaks did n

41 retically or by pressure pulses (10 ms at 20 psi) into the taste-responsive regions of the NST and th

42 ree irrigation pressures (high pressure [>20 psi], low pressure [5 to 10 psi], or very low pressure [

43 iquid-liquid separations run at or above 200 psi to provide solvent-free product, and the use of high

44 m tetraborate solution eluent (typically 200 psi) as the pump, and performing on-column detection usi

45 could withstand internal pressures of >2250 psi, more than 1 order of magnitude higher than their th

46 able to withstand pressures in excess of 250 psi.

47 l pressures above 20 MPa (approximately 2900 psi) for efficient pressure-driven HPLC separations.

48 INDUCIBLE 1A (RCI1A) gene encodes the 14-3-3 psi isoform.

49 x between an RNA hairpin derived from the 3' psi pocket of human U65 H/ACA small nucleolar RNA (snoRN

50 discovered that low hydrogen pressures (<30 psi) were essential to achieve high enantioselectivities

51 dized with 0.5 mol % Pd/Au (3:1)-17 under 30 psi of oxygen in water to give the dihydroxylated produc

52 els was observed at pressures as high as 300 psi.

53 in 78% yield under catalytic conditions (35 psi H(2)), presumably by the 5-exo-trig cyclization of t

54 ed that some of the repairs created at 20-40 psi ambient pressure could withstand more than 100 psi w

55 formation of corrosion precipitates at 20-40 psi, pH 3.0-11.0, and with upward and downward leak orie

56 er exchange under low-pressure operation (40 psi), parameters such as the size exclusion resin, load

57 withstand pressures up to approximately 4000 psi.

58 egrees C, 10s of hydrodynamic injection (0.5 psi) and UV detection at 254 nm.

59 osed to blast wave pressure of 300 kPa (43.5 psi) per day for 3 successive days, and euthanized 30 da

60 as flow of 6 mL/min, nebulizer pressure of 5 psi, and drying gas temperature set to 200 degrees C.

61 s under mild conditions (35 degrees C and 50 psi CO/H(2)), and Z-olefins afford excellent enantiosele

62 ely low-pressure catalytic hydrogenation (50 psi of hydrogen) was employed using Raney nickel as the

63 nd with increasing TMP up to a maximum of 50 psi (3.45 bar).

64 ylene pressure was increased from 100 to 500 psi in order to produce semicrystalline ethylene-rich en

65 onic Rh(I)-Josiphos complex in THF under 500 psi of H2 generated the corresponding tertiary carbinami

66 c columns at a mobile-phase pressure of 5000 psi provide flow rates of approximately 40 nL/min at a l

67 ature, 200 degrees C; nebulizing pressure, 6 psi (0.414 bar); capillary voltage, +2.5 kV; fragmentor

68 ated pressures, beyond the conventional 6000 psi (400 bar), has created a demand for injection system

69 uthenium dodecacarbonyl catalyst under 40-80 psi of CO.

70 endent of CO pressure up to 80 psi; above 80 psi one observes the onset of inhibition.

71 and N(2) pressure found to be 3206 V and 80 psi, respectively.

72 ted alkynes were acceptable substrates at 80 psi of ethylene.

73 is of CRP, including sheath gas pressure (80 psi), capillary temperature (275 degrees C), collision e

74 ation is independent of CO pressure up to 80 psi; above 80 psi one observes the onset of inhibition.

75 9 lbs) and could generate up to 55 MPa (8000 psi) pressure.

76 e solvent was changed and pressurized to 900 psi.

77 A psi equal to zero or one indicates that the biHis site i

78 In contrast, the deltaPKC activator, psi deltaRACK, injected at reperfusion, reduced ERK1/2 p

79 nd the specific PKC epsilon peptide agonist, psi epsilonRACK, each activated mitoK(ATP)-dependent K+

80 priming by the selective PKCepsilon agonist, psi epsilon receptor for activated c kinase (psiepsilonR

81 mp loading reaction by two subunits, chi and psi, which are not present in the crystal structures, we

82 2-19 amino acids) than the mu-, kappaM-, and psi-conotoxins (22-24 amino acids).

83 es previously found in the mu-, kappaM-, and psi-conotoxins (CC-C-C-CC).

84 as well as those encoding mu-, kappaM-, and psi-conotoxins revealed highly conserved amino acid resi

85 y in cap methylation, 3'-end maturation, and psi(28) formation.

86 that previously established for the mu- and psi-conotoxins.

87 eractions of nucleocapsid protein (NCp7) and psi-RNA.

88 e native structure by changing every phi and psi angle by either +/-3, +/-5 or +/-7 degrees, five sma

89 he nucleophilic cysteine follows the phi and psi angle pattern of a II' beta turn.

90 lear preference for adopting helical phi and psi angles in the pH 2.0 unfolded state.

91 ep learning architectures to predict phi and psi angles of protein backbone.

92 The mean absolute error (MAE) of phi and psi angles predicted by DRNN, DReRBM, DRBM and DNN is ab

93 trong preference to populate helical phi and psi angles.

94 n of the RNA backbone, comparable to phi and psi in the protein backbone.

95 A comparison of the phi and psi torsional angle differences between the crystal stru

96 4 to preferentially populate helical phi and psi values in the unfolded state.

97 The backbone (phi and psi) torsion angles of Val(6) are found to be -133 degre

98 mine the Ramachandran torsion angles phi and psi.

99 xes revealed similar ranges of phi (phi) and psi (psi) angles between iduronate and glucosamine rings

100 membrane if and only if Gag was present and psi was intact.

101 pically in mini c TAR DNA, mini TAR RNA, and psi(3) RNA, but at 5 degrees C, the motion became more a

102 rmation in much the same way that varphi and psi are used to describe backbone configuration of prote

103 ibility in the backbone dihedrals varphi and psi as well.

104 dependent constraints on backbone varphi and psi torsion angles in samples with sequential pairs of c

105 echanical bonds (corresponding to varphi and psi) that include realistic barriers to rotation that cl

106 n of the backbone dihedral angles varphi and psi.

107 lowing for control of the omega, varphi, and psi dihedral angles adopted by the systems.

108 reversibly interconvert between [PSI+] and [psi-] states.

109 ifts are dominated by local torsion angles , psi, chi1; hence, these experiments identify flexible to

110 The vRNA packaging signal, known as psi, inhibited imp-alpha binding to Gag, indicating that

111 changes associated with Xer recombination at psi.

112 The first band (psi) is centered between 260-280 Hz; the second, and str

113 the ATPase spiral observed upon DNA binding, psi binding promotes the clamp-loading activity of the c

114 oach and identified 4187 proteins from both [psi (-)] and [PSI (+)] strains.

115 echanistic scheme for the handling of f5U by psi synthases.

116 r mimic of stem-loop 3 RNA (SL3, also called psi-RNA, in the packaging domain of genomic RNA) is stro

117 The DnaX complex (DnaX(3)deltadelta'chi psi) within the Escherichia coli DNA polymerase III holo

118 two NC-binders to inhibit viruses containing psi-region deletions (DeltaSL1 or DeltaSL3) and found th

119 landscape of psi over which stomata control psi, and (2) the slope of the daily range of psi as pre-

120 e novo induced cultures are able to convert [psi (-)] cells to [PSI (+)] cells.

121 bsence of competition with the corresponding psi transcripts lacking SL1 or SL3 for binding DP6-Gag i

122 sslink-values agree with their corresponding psi-values when they have both have values of zero or on

123 -values are smaller than their corresponding psi-values, the apparent underestimation of structure fo

124 dues within the consensus sequence psiKxE/D (psi is a hydrophobic residue and x is any residue), alth

125 ution of unfolding forces for the protein D, psi(D)(f).

126 slope of the daily range of psi as pre-dawn psi declined, were strongly correlated with each other a

127 ity (7.5-fold, P < 0.02) and decreased delta psi m (2.6-fold, P < 0.04), and had decreased cell viabi

128 hat before autophagy mitochondria lose delta psi(m) and OPA1, and that overexpression of OPA1 decreas

129 -2 antagonist, rapidly induced loss of Delta psi m and caspase-9 activation but had no effect on the

130 mitochondrial transmembrane potential (Delta psi m) and weak caspase-9 activation, whereas thapsigarg

131 the mitochondrial membrane potential (delta psi m).

132 xhibited increased membrane potential (delta psi(m)) and a high probability of subsequent fusion, whi

133 ondria that were found to have reduced delta psi(m) and decreased levels of the fusion protein OPA1.

134 der, gamma(3)deltadelta', gamma(3)deltadelta'psi, and gamma(3)deltadelta'psichi.

135 s of residues with experimentally determined psi of unity.

136 od of estimation of the parent distribution, psi(D)(f), based on analyzing the force data for a tande

137 uctural similarity with the so-called double-psi barrel family of proteins.

138 -MS) to measure the 15N relative exceedance, psi(15N), of HONO in the gas-phase.

139 ce constraints derived from the experimental psi-values.

140 t our results in a simple correction factor, psi, the ratio of the corrected Young's modulus and the

141 A role for psi in stabilizing or promoting ATP- and ATPgammaS-induc

142 ative-like, respectively, while a fractional psi implies that in the TSE, the biHis site recovers onl

143 When a site with a fractional psi lies adjacent to a site with psi = 1, the fractional

144 acent to a site with psi = 1, the fractional psi generally signifies that the "fractional site" has a

145 This fractional psi-value remains unchanged when three metal ions of dif

146 counted for by the proportion of prion-free [psi(-) ] cells present, no change in the molecular weigh

147 cell division thereby generating prion-free [psi(-) ] cells.

148 stronger strain of [PSI+] and convert from [psi-] to [PSI+] with a much higher frequency.

149 ntaining the isostere, Ac-(Gly-Pro-Hyp)3-Gly-psi[(E)CH C]-Pro-Hyp-(Gly-Pro-Hyp)4-Gly-Gly-Tyr-NH2, had

150 When phi crosslink > psi, the apparent inconsistency is rationalized by the d

151 Stem-loop 3 RNA (SL3) in psi-RNA is a highly conserved motif in different strains

152 These binding sites are used in psi analysis studies to investigate structure formation

153 oorly with the nonaggregated Sup35 found in [psi(-)] cells.

154 35-GFP looked identical to the Sup35-GFP in [psi+] cells.

155 used bioinformatics applications, including (psi)-blast, modeller, muscle and Primer3, and tools are

156 The inability of these aptamers to inhibit psi-deleted viruses correlated with the absence of compe

157 ile the tilt angle of the entire rotaxane is psi = 41 degrees and 46 degrees , respectively.

158 Iterated psi-blast searches based on groups of globin sequences f

159 d solute accumulation of ahk1 mutants at low psi(w) suggest that AHK1 may not be the main plant osmos

160 umulation was reduced in ahk1 mutants at low psi(w).

161 Expression of AHK1 itself was reduced by low psi(w), in contrast to previous reports.

162 e the main plant osmosensor required for low psi(w) tolerance.

163 d, solute accumulation across a range of low psi(w) severities.

164 ahk1 mutants had reduced low psi(w) induction of Delta(1)-Pyrroline-5-Carboxylate Syn

165 prion, inhibits growth of [PSI(+)] but not [psi(-)] cells.

166 lication, and disruption of the nucleocapsid-psi-RNA complex interferes with viral replication.

167 milarity and fit of predicted and observed [/psi] main chain dihedral angle propensities.

168 mp partially compensates for the activity of psi when this subunit is not present and possibly serves

169 esults demonstrate the unique application of psi-value analysis in elucidating the structure of the t

170 Calculation of psi and phi dihedral angles from the chemical shift assi

171 allenging protein, we apply a combination of psi analysis (which probes the role of specific side-cha

172 metrics of stringency of stomatal control of psi, (1) a 'hydroscape' incorporating the landscape of p

173 =0.2-0.5, the relative standard deviation of psi(15N) is <4%.

174 pment of ligands that target the elements of psi-RNA of HIV-1 with high affinity and specificity.

175 chanistic investigation to another family of psi synthases and an enzyme that makes an adduct with f5

176 'hydroscape' incorporating the landscape of psi over which stomata control psi, and (2) the slope of

177 able to the existing methods, but the MAE of psi angle is 29 degrees , 2 degrees lower than the exist

178 The magnitude of psi depends on the degree to which an inserted bihistidi

179 urface areas and electrostatic potentials of psi-modified and unmodified branch site duplexes.

180 psi, and (2) the slope of the daily range of psi as pre-dawn psi declined, were strongly correlated w

181 In the optimal working range of psi(15N)=0.2-0.5, the relative standard deviation of psi

182 rics of stringency of stomatal regulation of psi during soil drying in eight woody species and determ

183 s in src SH3, are compared to the results of psi-analysis where strand association is stabilized by m

184 appear to be the highest combined values of psi and phi (34.3 degrees and 33.5 degrees, respectively

185 with Gag in late endosomal foci, again, only psi dependently.

186 Using our psi analysis method along with mutational varphi analysi

187 ccurring alternative p53 splice variant, p53-psi.

188 stribution when the overdispersion parameter psi is 0.

189 alpha) atoms (residues 5-28) is 0.3 A; (phi, psi) angles of D-Ala20 are the same as those of G20 in t

190 is of the Ramachandran dihedral angles (phi, psi) reveals that the residues adopting disallowed confo

191 amino acids by comparing their backbone phi, psi distributions in different types of secondary struct

192 es continuous estimates of the backbone phi, psi distributions.

193 e orientation but also to its backbone (phi, psi) angles.

194 isotropic chemical shifts and backbone (phi, psi) torsion angles indicate that both TPF4 and TPA4 ado

195 of the activation segment, measured by phi, psi, chi1, and pseudo-dihedral angles more accurately cl

196 and binding shows that the magnitude of phi, psi changes are in general minimal, although some large

197 An adjustment of the phi, psi backbone dihedral angles of the Ile residue in the e

198 xperiments, we are able to predict the (phi, psi, chi(1)) angles of Ala and Val within 5.8 degrees of

199 ,916 conformations as a function of the phi, psi, omega, chi1 and chi2 torsional angles for all 20 na

200 nor an ideal beta-hairpin with uniform (phi, psi) angles and coplanar strands, agrees with the experi

201 istributions around the average values (phi, psi) approximately (-57 degrees , -31 degrees) with a wi

202 ure of KL 4 when bound to lipids, with (phi, psi) angles that differ substantially from common values

203 There are no obvious correlations with phi, psi, chi 1, or chi2 torsion angles, unlike the results s

204 on conformations adopted by two adjacent phi,psi pairs (i.e., (phi,psi)(2) motifs).

205 h we call the niche, with characteristic phi,psi angles, is by far the commonest feature with this pr

206 y an initial exploration of the complex (phi,psi)(2) landscape of proteins, it shows that there is va

207 anosyloxy)-3',4'-didehydro-1',2'-dihydro-phi,psi-caroten -2'-ol, is novel and has been given the triv

208 ed by two adjacent phi,psi pairs (i.e., (phi,psi)(2) motifs).

209 to yield a parameter-dependent list of (phi,psi)(2) motifs, in order of their prominence.

210 resolution or better to create a purely phi,psi-based comprehensive empirical categorization of comm

211 nally rapid algorithm using only single (phi,psi) dihedral angle moves also generates tertiary struct

212 ted level of precision in describing the phi,psi angles of both previously known and novel motifs, or

213 more in-depth characterizations at the (phi,psi)(2) level and at higher dimensions.

214 four-dimensional space based on the two phi,psi pairs to yield a parameter-dependent list of (phi,ps

215 dow ranges in size from a length of 1-10 phi-psi pairs (3-12 residues).

216 f the fragment to a database of multiple phi-psi angles from high-resolution x-ray crystal structures

217 t is scored based on the fit of multiple phi-psi angles of the fragment to a database of multiple phi

218 t is represented by a vector of multiple phi-psi angles.

219 Reasonable models have higher-order phi-psi score fit values (m) > -1.00.

220 orithm is based in the geometry and the (Phi-psi)-space conformation of these regions.

221 phi/psi angles alternate in sign along the backbone, as is c

222 ns arising from fluctuations in backbone phi/psi torsion angles in the picosecond to nanosecond regim

223 ithms for chemical fragments, 3D motifs, phi/psi sequences, super-secondary structure motifs and for

224 larity and fit of predicted and observed phi/psi main chain dihedral angle propensities.

225 This involves a transition of the phi/psi angles of Gly-13 from the right to left alpha-helica

226 al averaging, with essentially uncoupled phi/psi torsion angles.

227 approximately -60 degrees) and more positive psi (> or = 160 degrees) give spectra showing the P(II)

228 pse of the mitochondrial membrane potential (psi(m)).

229 to controlled moderate low water potential (psi(w)) or to salt stress.

230 tomatal regulation of plant water potential (psi).

231 uence similarity to enzymes known to produce psi-end group modifications of carotenoids in proteobact

232 osed TCV hairpins H4a and H4b and pseudoknot psi(3), which are required for the TCV-specific requirem

233 allyl adenine (i(6)A(37)) and pseudouridine (psi(39)).

234 t position 34 (mcm5s2U34) and pseudouridine (psi) at position 39--two of which, ms2t6A37 and mcm5s2U3

235 he first four nucleotides and pseudouridine (psi) formation at uracil 28.

236 a phylogenetically conserved pseudouridine (psi) residue in the segment of U2 snRNA that pairs with

237 ses) isomerize uridine (U) to pseudouridine (psi) in RNA, and they fall into five families that share

238 RNA contains at least one pseudouridylation (psi) pocket, which is complementary to the sequences fla

239 evealed similar ranges of phi (phi) and psi (psi) angles between iduronate and glucosamine rings.

240 ct of Xer recombination at directly repeated psi sites on a circular unknotted DNA molecule is a righ

241 The packaging signal psi, at the 5' end of the viral gRNA, binds to Gag throu

242 genomic RNA with an intact packaging signal (psi) and Gag were observed to extend outward from the cy

243 cifically compete with the packaging signal (psi) of HIV-1 for binding to DP6-Gag.

244 The packaging signal (psi) of human immunodeficiency virus type 2 (HIV-2) is p

245 e CRISPR loci (termed prokaryotic silencing (psi)RNAs) and the RAMP module (or Cmr) Cas proteins.

246 cleoprotein (snoRNP) particle that guides SL psi(28) formation.

247 amino ester trifluoromethyl aldimines, small psi[CH(CF3)NH]-peptidomimetic backbones can be achieved

248 on for the dominant-negative effects of such psi-no-more (PNM) mutations and demonstrate directly the

249 The pseuoduridine synthases (psi synthases) isomerize uridine (U) to pseudouridine (p

250 se III holoenzyme depends upon a Pol III-tau-psi-chi-SSB binding network, where SSB is bound to the d

251 The psi factor depends on two dimensionless parameters, R/h

252 The psi subunit also increases the affinity of the clamp loa

253 The psi subunit is important for stabilizing an ATP-induced

254 The psi synthase TruA forms a covalent adduct with such RNA,

255 hi angle of the ith residue (phi(i)) and the psi angle of the residue i - 1 (psi(i-1)) on the 0.1 ps

256 ential interaction between HIV-1 Gag and the psi-region that may be distinct from that which occurs d

257 In contrast, the psi synthase TruB, which is a member of a different fami

258 A related structure reveals how the psi protein, essential for coupling the clamp loader to

259 hain stereochemistry, and flexibility in the psi dihedral angle.

260 base, and less exposure of the 2'-OH, in the psi-modified structure.

261 e genes encoding two enzymes that modify the psi end of myxoxanthophyll in Synechococcus sp. strain P

262 sequence (pal) located at the 3' end of the psi encapsidation signal is critical for human immunodef

263 -OH rather than on the 1'-OH position of the psi end of the molecule.

264 y, cytochrome c release, and collapse of the psi(m).

265 be asymmetric and strongly dependent on the psi backbone angle before and after phosphorylation.

266 The simulations indicate that the psi = 1 sites by themselves can be used to generate a we

267 rticle, we show structural evidence that the psi pocket can form the predicted base pairs with substr

268 ts from our work and others suggest that the psi subunit may introduce a temporal order to the clamp

269 omic RNA can be completely attributed to the psi region of the genome.

270 tial energy profile generated by varying the psi dihedral angle in Ace-Pro-NMe indicates that the con

271 The mechanism by which the psi synthases operate remains unknown, and mechanistic w

272 mulation the cells were transformed with the psi AE1A virus.

273 The -, psi-angles and chi(1) rotamer populations of tryptophan

274 agonist (DAMGO) and deltaOR antagonist (Tipp(psi)), and this leads to a shift in the pattern of ERK1/

275 tem, the Xer accessory protein PepA binds to psi accessory sequences, interwraps them, and brings the

276 capsid domain of Gag preferentially binds to psi and Rev Response elements in the viral genome, and G

277 This method is adapted from the traditional psi-value analysis, which uses engineered bi-His metal c

278 a mixed beta-sheet encompassing an uncommon psi-loop motif.

279 e other globular protein characterized using psi-analysis, also exhibits a single consensus TSE struc

280 l phosphatase (ctAcP) is characterized using psi-analysis, which identifies specific chain-chain cont

281 However, we demonstrate here using psi analysis with engineered metal ion binding sites tha

282 ribution of backbone dihedral angles (varphi,psi) obtained from an experimentally validated denatured

283 freedom per residue, described by its varphi,psi-angles.

284 minates another substantial region of varphi,psi-space for a blocked peptide; for conformers within t

285 steric clashes alone eliminate 3/4 of varphi,psi-space, a result that has guided all subsequent work.

286 To account for the systematic varphi,psi-dependent component of nonplanarity, we present a co

287 Analyses as a function of the varphi,psi-backbone dihedral angles show that the expected valu

288 Comparison with (varphi,psi) distributions from the Protein Data Bank further ju

289 formation, reproduced the 180 degrees varphi-psi dihedral rotation back to the open loop state.

290 ded proteins arising due to intrinsic varphi-psi dihedral angle fluctuations dictate the course of pr

291 he backbone torsional mobility in the varphi-psi dihedral angle space, we used a model intrinsically

292 -range conformational exchange in the varphi-psi dihedral space.

293 tropy in folded proteins by using the varphi-psi distributions of the 20 amino acids in common second

294 h are all down (Cgamma-endo), and the varphi/psi dihedral angles of the Xaa 3(S)Hyp residues are also

295 on of U0126 delivered at ischemia onset with psi deltaRACK injected at reperfusion increased infarct

296 fractional psi lies adjacent to a site with psi = 1, the fractional psi generally signifies that the

297 fractional site is distal to the sites with psi = 1, however, the histidines sample configurations i

298 interaction of the 3' end of the pal within psi with a motif located downstream of SL1.

299 -Gly dipeptide surrogates in the form of Xaa-psi[triazole]-F2Gly building blocks were established, an

300 cent to the accessory sequences from the Xer/psi multimer resolution system, we have imposed topologi