ライフサイエンスコーパス: repeated sequence

1 or example alleles containing transposons or repeated sequences).

2 epair, especially when a DSB occurs within a repeated sequence.

3 tutions for adenine at six positions in this repeated sequence.

4 gh both of the solifuges possess a region of repeated sequence.

5 t process but results in a homogenization of repeated sequences.

6 signal sequence and two conserved regions of repeated sequences.

7 and provide a robust method for dealing with repeated sequences.

8 s consistent with the transcription of short repeated sequences.

9 , resulting in more frequent contractions of repeated sequences.

10 y a remarkable genomic instability at simple repeated sequences.

11 C enrichment in both regulatory elements and repeated sequences.

12 c recombination between Ty elements or other repeated sequences.

13 bers, which bind to both single and tandemly repeated sequences.

14 fied because they do not bind palindromic or repeated sequences.

15 f the immediate hypomethylation occurring in repeated sequences.

16 ribonucleotide can compromise BER and RER in repeated sequences.

17 a major source of amplification of tandemly repeated sequences.

18 select for deletions or duplications of the repeated sequences.

19 The 3' region of the cagA gene contains repeated sequences.

20 nd to stimulate recombination between short, repeated sequences.

21 ions known to be mainly composed of tandemly repeated sequences.

22 screened for recombinant plasmids containing repeated sequences.

23 enetic effects, often due to the presence of repeated sequences.

24 by recombination between flanking homologous repeated sequences.

25 tochondrial genome recombination at numerous repeated sequences.

26 n to occur by recombination between directly repeated sequences.

27 on and can address the methylation status of repeated sequences.

28 ntains unprecedented amounts of very similar repeated sequences.

29 lls whose genomes contain numerous divergent repeated sequences.

30 nt mutation, although most are not currently repeated sequences.

31 half of the mammalian genome is composed of repeated sequences.

32 hat are difficult to repair, including other repeated sequences.

33 ely long polypeptide chains with stipulated, repeated sequences.

34 iation and reinvasion occur within dispersed repeated sequences.

35 ual decrease in RT for nose pokes completing repeated sequences.

36 ed replication protein, TrfA; and A + T-rich repeated sequences, 13-mers, which serve as the initial

37 intron, by homologous recombination between repeated sequences (20-60 bp) abundant in that genome; A

38 A repeated sequence 3' of the DMD regulates imprinted meth

39 Repeated sequences account for 67.2% of the AtDt genome,

40 ficant differences in ADCs among the various repeated sequence acquisitions or the three ROIs.

41 aracterized by genomic instability at simple repeated sequences, also known as microsatellite instabi

42 Despite repeated sequence analyses, no mutations were found.

43 n of a second chromosome region bounded by a repeated sequence and a telomere, suggesting the dicentr

44 tructural features, including a PEXEL motif, repeated sequences and a C-terminal PHIST domain, and sh

45 t eukaryotes, contain conserved 5'-TTAGGG-3' repeated sequences and are maintained by the action of t

46 ttle is known about the relationship between repeated sequences and deletion formation in mammalian c

47 DNA, which comprises interspersed and tandem-repeated sequences and exons other than first exons, fro

48 ation followed by misaligned renaturation of repeated sequences and intermolecular pairing of unpaire

49 Despite its numerous repeated sequences and IS elements, the serotype 2 genom

50 This BAC clone lacked highly repeated sequences and mapped to the subtelomeric region

51 age mutations and increase mutation rates in repeated sequences and that there are sequence-specific

52 content, the deletion of several classes of repeated sequences and the introduction of thousands of

53 match repair clearly leads to instability of repeated sequences and to an increased risk for tumorige

54 s, silencing was found to depend strictly on repeated sequences and to correlate with an absence of s

55 e-strand break-induced recombination between repeated sequences, and capture of a chromosome arm by b

56 Complex genomes contain numerous repeated sequences, and genomic duplication is believed

57 ssing Ty1 mobility and recombination between repeated sequences, and one gene (YLR154c) that was not

58 uble-strand break (DSB) formation within the repeated sequences, and that the DSB formation is depend

59 dinucleotide frequencies, the interaction of repeated sequences, and the presence or absence of histo

60 This repeated sequence appears to provide targets for homolog

61 These short repeated sequences, approximately 80, 56, and 71 nucleot

62 Tandemly repeated sequences are a common feature of vertebrate mi

63 Tandemly repeated sequences are a major component of the eukaryot

64 Direct or inverse repeated sequences are important functional features of

65 However, these repeated sequences are notoriously prone to aberrant del

66 nally studied in experimental settings where repeated sequences are present or are being introduced i

67 pression may be silenced epigenetically when repeated sequences are present.

68 In Neurospora crassa, repeated sequences are silenced by repeat-induced point

69 Such repeated sequences are usually short and present at seve

70 bats representing 11 families revealed that repeated sequence arrays near the tRNA-Pro gene are pres

71 ty are composites of familiar and unfamiliar repeated sequences as well as what could be considered "

72 ary; 24 of 103 tested (23%) contained highly repeated sequences, as determined by their hybridization

73 The low-frequency repeated sequences at either end of the commonly deleted

74 cate that in addition to the requirement for repeated sequences at the donor and acceptor sites, temp

75 Telomeric DNA - the short, tandemly repeated sequences at the ends of chromosomes - is synth

76 Telomeric DNA consists of short, tandemly repeated sequences at the ends of chromosomes.

77 is dependent on the shortening of telomeres, repeated sequences at the ends of the chromosomes.

78 Recombination between repeated sequences at various loci of the human genome a

79 There is a variety of repeated sequences, both local and dispersed.

80 repair of chromosomal DSBs occurring between repeated sequences by stimulating use of an error-prone

81 A consists of a variable length of the short repeated sequence C1-3A.

82 ur at sites of replication stalling at short repeated sequences capable of forming hairpin structures

83 same novel IS-like element identified by the repeated sequence capture method of Matsutani et al.

84 The repeated sequence CARE2/Rel2 is a subtelomeric repeat on

85 RNAP transcribing templates engineered with repeated sequences carrying imbedded, sequence-specific

86 Both copies of a repeated sequence CATT(A/T), located between bp -53 and

87 ropose that the vast amounts of very similar repeated sequences cause frequent errors in recombinatio

88 An exacerbated genomic instability at simple repeated sequences characterizes cancer of the microsate

89 A remarkable instability at simple repeated sequences characterizes gastrointestinal cancer

90 roteins and their relation to human disease, repeated sequences, comparative genome-wide studies of m

91 he agr locus; deletions and mutations in the repeated sequences completely abolished the fsrB and gel

92 Methylation is regulated by a repeated sequence, consisting of a 41-mer repeated 40 ti

93 The libraries of human repeated sequences contain the DNA sequences of many TEs

94 and effective repression, arises from highly repeated sequences containing miRNA target sites.

95 a model that shows how pairings between long repeated sequences could be efficiently rejected even th

96 Intact rats that experienced repeated sequences demonstrated robust interference effe

97 o reactions with RNAs containing the GGGGCUG repeated sequence depress splicing of the upstream intro

98 tation of oligomers makes cloning of defined repeated sequences difficult.

99 1 integration frequencies near several human repeated-sequence DNA families, using a repeat-specific

100 d that polypeptides with a -Gly-4(R)-Hyp-Yaa-repeated sequence do not form a triple helix.

101 Misalignment of repeated sequences during DNA replication can lead to de

102 Misalignment of repeated sequences during RecBCD-mediated repair may acc

103 l recombination" between separated, directly repeated sequence elements (>100 bp), events that leave

104 Repeated sequence elements found upstream of the ribosom

105 Repeated sequence elements found upstream of the ribosom

106 Highly repeated sequence elements found within the loops of pre

107 The DNA breaks occur within repeated sequence elements in the linear nuclease-hypers

108 Duplication or expansion of directly repeated sequence elements is associated with a number o

109 Unusual tandemly repeated sequence elements located upstream of H chain g

110 Although repeated sequence elements such as HERVs have the potent

111 in the same fashion, they typically contain repeated sequence elements such as standard promoters an

112 ufficient for replication and contains three repeated sequence elements that are conserved in T.pyrif

113 ns may use either RNA secondary structure or repeated sequence elements to achieve high affinity and

114 Repeated sequence elements were found within the 3'NCR o

115 nscribed regions and frequently occur within repeated sequence elements, including CA repeats, non-CA

116 ted with their content of a number of common repeated sequence elements.

117 whereby they are typically unable to detect repeated sequences embedded within randomly presented st

118 of new cassette exons are composed of highly repeated sequences, especially Alu.

119 eric heterochromatin, where the abundance of repeated sequences exacerbates the risk of ectopic recom

120 tocols: homology-based excision via directly repeated sequences, excision by phage site-specific reco

121 e repeats (TNRs) are highly unstable, as the repeated sequences exhibit a high rate of mutational cha

122 ed domains comprised interspersed and tandem-repeated sequences, exons other than first exons, and no

123 ic region of chromosome 4, relative to other repeated sequence families and single copy sequences, wa

124 ispersion, and evolution of one of the major repeated sequence families of Arabidopsis.

125 findings in yeast that recombination between repeated sequences far apart on the same chromosome may

126 1 to 186) has six glycine-rich repeats of a repeated sequence found in HrpZ, and a purified HrpW har

127 inus of CCA1, which has some homology to the repeated sequence found in the DNA binding domain of Myb

128 Alpha-satellite is a family of tandemly repeated sequences found at all normal human centromeres

129 that replication forks stall at a family of repeated sequences (FR) within the Epstein-Barr virus la

130 When we removed the small regions of repeated sequence from either short or long probes, we f

131 Some of these correspond to highly repeated sequences from either duplicated endogenous gen

132 ng method is not significantly influenced by repeated sequences, genome size, and genome complexity.

133 (TAS), which consists of a mosaic of complex repeated sequences, has been identified as a source of g

134 ps and their elevated mutation rates, tandem repeated sequences have the potential to influence splic

135 fied in humans are flanked by short directly repeated sequences; however, mechanisms by which these d

136 ng human L1 elements to study methylation of repeated sequences, (i) we distinguish valid L1 sequence

137 chanism for deletion and/or amplification of repeated sequence in both prokaryotic and eukaryotic gen

138 L1 is a ubiquitous interspersed repeated sequence in mammals that achieved its high copy

139 Here we show that a repeated sequence in the cytoplasmic tail of synaptophys

140 is transcript revealed a cluster of tandemly repeated sequence in the human, orangutan, and chimpanze

141 ring sites, which consist mostly of a 240-bp repeated sequence in the intergenic spacers (IGS) of the

142 bp mitochondrial DNA (mtDNA) D-loop tandemly repeated sequence in the populations of a North American

143 gnment of the nascent strand relative to the repeated sequence in the template strand accomplishes th

144 tion in the de novo methylation of dispersed repeated sequences in a premeiotic genome scanning proce

145 patible with the presence of large arrays of repeated sequences in cloned DNA.

146 m both a higher number of repeats and larger repeated sequences in comparison to eight other angiospe

147 t mutation in Neurospora crassa and A:T-rich repeated sequences in heterochromatin in other organisms

148 ry that a large number of loci with tandemly repeated sequences in human and many eukaryote species a

149 ir are important in the somatic expansion of repeated sequences in mouse models of trinucleotide repe

150 osatellite expansion disorders, expansion of repeated sequences in noncoding regions gives rise to RN

151 Further, the abundance of repeated sequences in plant genomes requires that crossi

152 vercome the inherent difficulty of annealing repeated sequences in register.

153 y of ectopic recombination between naturally repeated sequences in S. pombe.

154 r GC skews and the presence of ISs and large repeated sequences in the AY-WB and OY-M genomes are ind

155 In our studies of repeated sequences in the genome of the marine shrimp, P

156 Host defense mechanisms monitor repeated sequences in the genome, modulating their chrom

157 logous recombination in yeast between common repeated sequences in the targeted chromosomal fragment.

158 Template jumping also occurs between repeated sequences in the Tomato and green fluorescent p

159 The R751 genome reveals a family of repeated sequences in these regions which may form the b

160 a rationale for the extensive repertoire of repeated sequences in this genome.

161 The instability of repeated sequences in this strain may be linked to the l

162 ed for this purpose, we searched for various repeated sequences including inverted, direct tandem, an

163 the pattern of methylation of several highly repeated sequences including the rDNA arrays, a Y-specif

164 Detailed analyses of repeated sequences indicate that many of the Glycine rep

165 wo examples were control of transcription by repeated sequence inserts in sea urchin genomes.

166 mid-based recombination assay to investigate repeated sequence instability in human cells.

167 location and DNA sequence divided the seven repeated sequences into two classes.

168 mitochondrial DNAs is the presence of large repeated sequences involved in intramolecular and interm

169 which suggests that hairpin formation in the repeated sequence is disrupted.

170 lity and that the secondary structure of the repeated sequence is disrupted.

171 ous recombination occurring among misaligned repeated sequences is a significant source of the molecu

172 s proteolytic maturation in which any of six repeated sequences is cleaved by the nutrient-responsive

173 ion patterns on the complementary strands of repeated sequences is difficult using standard bisulfite

174 Homologous recombination between dispersed repeated sequences is important in shaping eukaryotic ge

175 leting multiple nucleotides between directly repeated sequences is reduced by approximately 10-fold i

176 ed with a transgene locus containing several repeated sequences is undesirable.

177 by negative regulation of DNA methylation at repeated sequences, linking to telomere maintenance and

178 The NT4 repeated sequence LKTEN was highly homologous with a sit

179 ple inputs; these include the interaction of repeated sequences, local states of histone lysine methy

180 marked changes resulted in demethylation of repeated sequences, loss of insulin-like growth factor I

181 ssion of rearrangements involving divergent, repeated sequences may underlie the genome instability s

182 arently due to the copy number of a 135-base repeated sequence, may be the cause of the differential

183 eta-actin mRNA, Vera specifically binds to a repeated sequence motif in the Vg1 localization element

184 ber of a diverse protein family defined by a repeated sequence motif known as the KEL repeat (KREP).

185 Instead, it contains a repeated sequence motif similar to a regulatory element

186 disordering amino acid proline, they contain repeated sequence motifs and extensive posttranslational

187 lar numbers of genes, with abundant tandemly repeated sequence motifs, and transposable elements alon

188 o tested peptides we created that included 3 repeated sequence motifs.

189 s of G(i)-like G proteins contain homologous repeated sequences named G protein regulatory (GPR) moti

190 a mechanism for metabolic regulation, since repeated sequences nucleate heterochromatin formation in

191 ose that rearrangements between short tandem repeated sequences occur by errors made during a replica

192 We hypothesize that polymorphisms in repeated sequences occur with some baseline distribution

193 f collagen is the triple helix formed by the repeated sequence of -Gly-Xaa-Yaa-.

194 line in the Yaa position of the -Gly-Xaa-Yaa-repeated sequence of collagen plays a crucial role in th

195 ington's disease is caused by expansion of a repeated sequence of the amino acid glutamine in the abn

196 ht healthy subjects listening passively to a repeated sequence of unrelated words.

197 ain, typically eliminating five of the seven repeated sequences of 20 amino acids (aa) each in the ce

198 aa in length at its N-terminal end, and four repeated sequences of about 34 aa at its C-terminal end.

199 ates that LGN is a mosaic protein with seven repeated sequences of about 40 aa in length at its N-ter

200 Long repeated sequences of DNA and their associated secondary

201 Recently, it has been shown that short, repeated sequences of intermittent ischemia and reperfus

202 Repeated sequences of neural activity are a pervasive fe

203 iefly, the task involves the presentation of repeated sequences of odors at a single port and require

204 ntramolecular recombination between tandemly repeated sequences of rho(-) mtDNA to produce small, cir

205 ated template-matching algorithm to identify repeated sequences of syllables and a modified dynamic t

206 ed and recorded, determining variants within repeated sequences of the human genome remains a challen

207 t Cdc4, which is an F-box protein containing repeated sequences of WD40 (a unit containing about 40 r

208 The repeated sequencing of bacterially-cloned fragments of p

209 l repair of double-strand breaks in tandemly repeated sequences often results in the loss of one or m

210 s recombination (NAHR), mediated by flanking repeated sequences or segmental duplications.

211 Large blocks of tandemly repeated sequences, or satellites, surround the centrome

212 ribosomal DNA tend to be formed of high copy repeated sequences organized in tandem arrays.

213 ParB bound in vitro to repeated sequences present in a region, parS, that posse

214 essing recombination in Arabidopsis at every repeated sequence ranging in size from 108 to 556 bp.

215 the chromosome of this bacterium is a set of repeated sequences related to msDNA.

216 vegetative cells of fungi are undefined, but repeated sequences seem particularly susceptible to thes

217 Repeated sequences serve as donor and acceptor templates

218 BatC and BatE contain 2-4 repeated sequences similar to the tetratricopeptide repe

219 Highly repeated sequences smaller than 100 nt have been describ

220 umerary B chromosome were determined using a repeated sequence specific to the centric region.

221 Over 50% of the genome consists of repeated sequences, such as retrotransposons and genes f

222 ctures and several unusual sets of conserved repeated sequences suggesting novel regulatory systems f

223 The egg receptor for lysin is a tandemly repeated sequence that evolves by concerted evolution.

224 he intervening D(H)s form part of a tandemly repeated sequence that expresses tissue-specific, antise

225 These similarities include a repeated sequence that forms the basis of the reiterated

226 GlnR binding site includes four copies of a repeated sequence that may be the recognition site for t

227 belements of the silencer include five short repeated sequences that are required for Tra2 binding bu

228 oteins containing short lysine-rich tandemly repeated sequences that are sufficient to localize to th

229 Telomeres consist of short repeated sequences that are synthesized by telomerase, a

230 east in part, of relatively short modules of repeated sequences that are the source of insertion-dele

231 telomeres of most organisms consist of short repeated sequences that can be elongated by telomerase,

232 d endonuclease (VDE) and flanked by directly repeated sequences that can be used for intrachromatid s

233 ombination events between the abundant short repeated sequences that characterize the genomes of high

234 verse-transcribing genetic elements, require repeated sequences (the donor and acceptor sites) betwee

235 If heterologies are present between repeated sequences, the mismatch repair system dependent

236 'regional' centromeres embedded in tandemly repeated sequences to holocentromeres that extend along

237 s of rearranged gene clusters are flanked by repeated sequences, tRNAs, or pseudogenes.

238 Deletion analysis has shown that a repeated sequence, TTTTGAT, is required for ToxR binding

239 merase, telomeric DNA, is typically a G-rich repeated sequence, (TTTTGGGG)(n) in the ciliate Euplotes

240 e well-studied BimA protein, and found short repeated sequences unique to Burkholderia species, as we

241 amplification technique that creates tandem repeated sequences, was used in combination with a fluor

242 for the structural analysis of DNA in mirror-repeated sequences we modified a conventional protocol.

243 ng the genetic loci containing the conserved repeated sequences, we have characterized a prtP gene ho

244 Whereas dispersed repeated sequences were demethylated in mutant germ cell

245 tion experiments, it was concluded that both repeated sequences were essential for specific protein b

246 gions of extensive divergence that contained repeated sequences were found 3' to this conserved regio

247 MR imaging time and examinations with repeated sequences were recorded.

248 The directly repeated sequences were upstream of the polypurine tract

249 cal for TR2-11-f binding were mapped to both repeated sequences, whereas the spacer and the flanking

250 e more effectively resolves conflicts due to repeated sequences which is the main difficulty of the s

251 oth cases phiRv1 is inserted into a REP13E12 repeated sequence, which presumably contains the bacteri

252 This repeated sequence, which we refer to as the upstream hom

253 merous copies of the (TTAGGG)(n).(AATCCC)(n) repeated sequence with multiple TTAGGG repeats in 3' sin

254 Repeated sequences with >100 base pair lengths occupy mo

255 ng the ribosomal DNA (rDNA), are composed of repeated sequences with well-defined copy numbers that m

256 Integration occurred before or after the repeated sequence, with one integration site between the

257 site-directed mutations to identify directly repeated sequences within attN1 that were required for s

258 Only the repeated sequences within DMD2 were required for imprint

259 We find that very short (e.g. 20 nt) perfect repeated sequences within much longer probes (e.g. 350-1

260 Each of the 20 repeated sequences within the FR contains a binding site

261 Genome assembly is difficult due to repeated sequences within the genome, which create ambig

262 The distribution of these repeated sequences within the karyotype of this species,

263 mutation correlates with DNA methylation and repeated sequences within the loci, recent experiments a

264 at the strand junction profoundly influences repeated sequences within three-way junctions.

265 e, pairings between different copies of long repeated sequences would usually become irreversible.

266 Nup475 contains two tandemly repeated sequences YKTELCX8CX5CX3H (Cys3His repeats) tha