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1 inobenzoic acid (pABA) and 5-phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) to produce 4-(beta-D-ribo
4 hanism in which a histidine deprotonates the ribosyl 2'-hydroxyl pinned in place by a serine, leading
5 e complex of the cyclase with an NAD analog, ribosyl-2'F-2'deoxynicotinamide adenine dinucleotide (ri
7 -(3)H] KIE of 1.4% indicate that significant ribosyl 5'-reconfiguration and purine rotation occur on
9 enzyme responsible for cADPR synthesis, ADP-ribosyl (ADPR) cyclase, is rapidly induced by ABA in bot
10 veal how these enzymes differentiate between ribosyl and deoxyribosyl nucleotides or nucleosides and
11 nate motion for NAMPT to be migration of the ribosyl anomeric carbon from the pyrophosphate leaving g
12 ate motion involves a 2.1-A excursion of the ribosyl anomeric carbon, whereas the adenine ring and th
13 ribosyltransferases similar to CT and an ADP-ribosyl(arginine)protein hydrolase (ADPRH), which cleave
16 t Drosophila insulator proteins are poly(ADP-ribosyl)ated and that mutation of the poly(ADP-ribose) p
17 efined its substrate specificity as mono(ADP-ribosyl)ated aspartate and glutamate but not lysine resi
18 urther, we demonstrated that LXR is poly(ADP-ribosyl)ated by PARP-1, a potential mechanism by which P
20 osyl)ation reactions, E2F-1 was not poly(ADP-ribosyl)ated by wild-type PARP-1 in vitro, indicating th
24 38- to 87-kDa and the 17- to 38-kDa poly(ADP-ribosyl)ated protein expression increased by 74% and 275
25 ng elevated intracellular levels of poly(ADP-ribosyl)ated proteins (PAR(high)) responded to pharmacol
28 Single or double deletion of the poly(ADP-ribosyl)ated regions and PARP inhibition increased the h
32 presence of DNA and NAD(+), PARP-1 poly(ADP-ribosyl)ates itself and Ku70/80 but not WRN, and gel-shi
34 report that HMGN1 affects the self-poly(ADP-ribosyl)ation (i.e., PARylation) of poly(ADP-ribose) pol
35 ankyrase 1 usually results in their poly(ADP-ribosyl)ation (PARsylation) and can lead to ubiquitylati
38 PARP1 binds to and modifies PAP by poly(ADP-ribosyl)ation (PARylation) in vitro, which inhibits PAP
43 polymerase 1 (PARP1) catalyzes the poly(ADP-ribosyl)ation (PARylation) of proteins, a posttranslatio
45 ociated with an increase in protein poly(ADP-ribosyl)ation (PARylation), and was blocked by pharmacol
46 ranslational modifications, such as poly(ADP-ribosyl)ation (PARylation), regulate chromatin-modifying
51 domain of WRN strongly inhibits the poly(ADP-ribosyl)ation activity in H2O2-treated control cell line
53 hat couples DNA damage detection to poly(ADP-ribosyl)ation activity through a poorly understood mecha
54 function being involved both in the poly(ADP-ribosyl)ation and being a constituent of the NAD(+) salv
55 odifies various nuclear proteins by poly(ADP-ribosyl)ation and functions as a key enzyme in the base
56 ctivity controls reversible protein poly(ADP-ribosyl)ation and potentially of how the defects in this
58 der hypoxic conditions, we detected poly(ADP-ribosyl)ation and reduced activity of GAPDH; inhibition
59 Moreover, RECQ1 regulates PARP1 auto-(ADP-ribosyl)ation and the choice between long-patch and sing
61 ty is required for PARP-1-dependent poly(ADP-ribosyl)ation at the promoters of commonly regulated tar
62 Suppression of DNA damage-induced poly(ADP-ribosyl)ation by PARP inhibitors impairs early DNA damag
64 In vitro, TIN2 protected TRF1 from poly(ADP-ribosyl)ation by tankyrase 1 without affecting tankyrase
65 hows that XPC-RAD23B is a target of poly(ADP-ribosyl)ation catalyzed by PARP1, which can be regarded
66 ore, our results suggest that Hrp38 poly(ADP-ribosyl)ation controls eye pattern formation via regulat
71 unohistochemistry revealed enhanced poly(ADP-ribosyl)ation in all experimental groups manifesting neu
72 view, we discuss recent findings on poly(ADP-ribosyl)ation in DNA damage response as well as the mole
73 viously, we hypothesized a role for poly(ADP-ribosyl)ation in plant defense responses when we detecte
75 and provided evidence for a role of poly(ADP ribosyl)ation in Stat-mediated transcriptional responses
85 Our results suggest that PARP-1 poly(ADP-ribosyl)ation is a terminal event in the apoptotic respo
93 results suggest that p65 NF-kappaB poly(ADP-ribosyl)ation may be a critical determinant for the inte
94 s, our results suggest that protein poly(ADP-ribosyl)ation may be a general mechanism to target prote
99 vivo data support a model in which poly(ADP-ribosyl)ation of DDB2 suppresses DDB2 ubiquitylation and
100 d pathogen-dependent changes in the poly(ADP-ribosyl)ation of discrete proteins were also observed.
101 entation and resulted in persistent poly(ADP-ribosyl)ation of DNAS1L3; it did not, however, prevent t
103 onclusion, these data indicate that poly(ADP-ribosyl)ation of GAPDH and the subsequent inhibition of
104 on was found to be a consequence of poly(ADP-ribosyl)ation of GAPDH by poly(ADP-ribose) polymerase (P
108 ors of PARP-1 auto-modification and poly(ADP-ribosyl)ation of histone H1 in the absence of free DNA e
110 , and gel-shift assays showed that poly-(ADP-ribosyl)ation of Ku70/80 decreases the DNA-binding affin
112 Numerous bacterial toxins catalyze mono(ADP-ribosyl)ation of mammalian proteins to influence cell ph
113 (PARP-1) can be hyperactivated, causing (ADP-ribosyl)ation of nuclear proteins (including itself), re
114 1 itself becomes activated, but the poly(ADP-ribosyl)ation of other cellular proteins is severely imp
115 Our results show that the covalent poly(ADP-ribosyl)ation of p53 is a time-dependent protein-poly(AD
116 B sites and showed that TNF induced poly(ADP-ribosyl)ation of RelA when bound to the Phex promoter.
117 nds to DNA breaks and catalyzes the poly(ADP-ribosyl)ation of several substrates involved in DNA dama
118 that Parg null mutation does cause poly(ADP-ribosyl)ation of Squid and hrp38 protein, as well as the
119 ollowing that, we demonstrated that poly(ADP-ribosyl)ation of Squid and hrp38 proteins inhibits splic
120 ing to nicked DNA, PARP-1 catalyzes poly(ADP-ribosyl)ation of the acceptor proteins and itself using
121 ing to nicked DNA, PARP-1 catalyzes poly(ADP-ribosyl)ation of the acceptor proteins using NAD (+) as
122 proximal tubules after IRI leads to poly(ADP-ribosyl)ation of the key glycolytic enzyme glyceraldehyd
123 Phosphorylation, acetylation, or poly(ADP-ribosyl)ation of the linker residues may therefore act a
125 RP-1 action) or by the formation of poly(ADP-ribosyl)ation of topoisomerase I (PARP-1/NAD action).
128 g factor 2 (TRF2) and is capable of poly(ADP-ribosyl)ation of TRF2, which affects binding of TRF2 to
129 e demonstrate that DDB2 facilitated poly(ADP-ribosyl)ation of UV-damaged chromatin through the activi
132 RP-interacting protein that removes mono(ADP-ribosyl)ation on glutamate amino acid residues in PARP-m
133 that WS cells are deficient in the poly(ADP-ribosyl)ation pathway after they are treated with the DN
135 ed on the signaling role of PARP in poly(ADP-ribosyl)ation rather than any role that can be ascribed
136 of p53 is a time-dependent protein-poly(ADP-ribosyl)ation reaction and that the addition of this tum
137 t with the conclusion that the auto-poly(ADP-ribosyl)ation reaction catalyzed by PARP-1 facilitates t
138 rast to p53, a positive acceptor in poly(ADP-ribosyl)ation reactions, E2F-1 was not poly(ADP-ribosyl)
139 ational modification of proteins by poly(ADP-ribosyl)ation regulates many cellular pathways that are
140 gether, these findings suggest that poly(ADP-ribosyl)ation regulates the interaction between hnRNPs a
141 sses Nanos translation, whereas its poly(ADP-ribosyl)ation relieves the repression effect, allowing r
144 the suppression of topoisomerase I poly(ADP-ribosyl)ation through the competition with NAD for the b
145 crease in activity of GAPDH and its poly(ADP-ribosyl)ation were prevented by overexpression of either
148 ction, which caused increased Hrp38 poly(ADP-ribosyl)ation, also resulted in the rough-eye phenotype
149 gh aberrant crosstalk between CTCF, poly(ADP-ribosyl)ation, and DNA methylation may be a general mech
151 ilization is largely independent of poly(ADP-ribosyl)ation, it cannot solely explain the chromatin re
152 ot an efficient covalent target for poly(ADP-ribosyl)ation, our results are consistent with the concl
153 onally, DDB2 itself was targeted by poly(ADP-ribosyl)ation, resulting in increased protein stability
155 idly modified by tankyrase-mediated poly(ADP-ribosyl)ation, which promotes the proteolysis of Axin an
156 eta-catenin signaling by preventing poly(ADP-ribosyl)ation-dependent AXIN degradation, thereby promot
157 efense-associated expression of the poly(ADP-ribosyl)ation-related genes PARG2 and NUDT7 and observed
170 magnesium salt present did they generate the ribosyl cation by binding to the leaving group and then
173 pports a mechanism where, after nicotinamide-ribosyl cleavage, the carbonyl oxygen of acetylated subs
174 on involves the cleavage of the nicotinamide-ribosyl, cleavage of an amide bond, and transfer of the
175 artial 3'-OH polarization and H3'-endo-->exo ribosyl configuration at the spMTAN transition state.
176 eotides at sGC alpha1beta1 require a 3'-endo ribosyl conformation (versus 3'-exo in 3'-MANT-2'-dATP).
177 Mammalian CD38 and its Aplysia homolog, ADP-ribosyl cyclase (cyclase), are two prominent enzymes tha
179 r molecular inhibition of CD38 abolished ADP-ribosyl cyclase activity and disrupted elongation of the
180 show that CD38 expression and endogenous ADP-ribosyl cyclase activity are developmentally regulated d
181 a glucocorticoid, on CD38 expression and ADP-ribosyl cyclase activity in HASM cells stimulated with T
182 is a multifunctional protein possessing ADP-ribosyl cyclase activity responsible for both the synthe
183 time PCR, and Western blot analysis, and ADP-ribosyl cyclase activity was assayed with nicotinamide g
184 ificant augmentation of CD38 expression, ADP-ribosyl cyclase activity, and Ca2+ responses to the agon
185 TNF-alpha augmented CD38 expression and ADP-ribosyl cyclase activity, which were attenuated by dexam
186 is of beta-NAD(+), but also carrying out ADP-ribosyl cyclase and ADP-ribosyltransferase activities, m
187 ydrolytic activity and lacked detectable ADP-ribosyl cyclase and ADP-ribosyltransferase activities.
188 sis of a BFA-ADP-ribose conjugate by the ADP-ribosyl cyclase CD38 and (ii) covalent binding of the BF
189 ibitors of cADPR hydrolysis by the human ADP-ribosyl cyclase CD38 catalytic domain (shCD38), illustra
190 ous assay with sirtuin-1 (Sirt1) and the ADP-ribosyl cyclase CD38, the resulting steady-state kinetic
193 family of related enzymes, including the ADP-ribosyl cyclase from Aplysia california (ADPRAC) and CD3
198 sly reported that cADPR, produced by the ADP-ribosyl cyclase, CD38, controls calcium influx and chemo
203 y, a family of ectocellular enzymes, the ADP-ribosyl cyclases (ARCs), has emerged as being able to ch
204 substrate: poly(ADP-ribose) polymerases, ADP-ribosyl cyclases (CD38 and CD157), and sirtuins (SIRT1-7
207 a-linked nucleotide N(1) -(5-phospho-alpha-D-ribosyl)-DMB (alpha-ribazole-5'-P, alpha-RP), a precurso
208 e result of nicotinamide intercepting an ADP-ribosyl-enzyme-acetyl peptide intermediate with regenera
213 he enzyme and a conformational change in the ribosyl group leading to migration of the anomeric carbo
214 s with oxacarbenium mimics replacing the NMN-ribosyl group of NAD(+) show 200-620-fold increased affi
215 gresses, carbocation character builds on the ribosyl group, the distance between the purine and the c
217 nd BcmB that prefer substrates containing 2'-ribosyl groups have a phenylalanine positioned in the ac
218 ansferase (ART-2)-mediated attachment of ADP-ribosyl groups to cell surface proteins; expression of A
219 rase, the enzyme that uses NAD to attach ADP-ribosyl groups to cell surfaces, are also resistant to C
220 ce ART-2 uses NAD but not ADPR to attach ADP-ribosyl groups to the cell surface, and that these group
221 thine and that ADP-ribosylated HNP-1 and ADP-ribosyl-HNP-(ornithine) were isolated from bronchoalveol
227 inding of DNA, although the presence of a 3'-ribosyl hydroxyl group partially overcame this requireme
228 ormed to study the effect of polarization of ribosyl hydroxyls, torsional angles, and the effect of b
232 (N-methyl)anthraniloyl substitutions at the ribosyl moiety and compared the data with that for the s
234 pectively, which catalyze the removal of the ribosyl moiety from nucleosides so that the nucleotide b
237 recedented transfer and isomerization of the ribosyl moiety of S-adenosylmethionine (AdoMet) to a mod
238 )2-like transition-state model, in which the ribosyl moiety possesses significant bond order to both
241 es in hPNP cause this stack, centered on the ribosyl O-4' oxygen, to squeeze together and push electr
242 the enzyme's capacity to contact individual ribosyl OH groups reduced the k(cat)/K(m) value of the T
243 ects predicted a 3-endo conformation for the ribosyl oxacarbenium-ion corresponding to H1'-C1'-C2'-H2
244 on and transition state stabilization of the ribosyl oxocarbenium ion occur from neighboring group in
246 ]Galf for galactan biosynthesis and 5-P-[14C]ribosyl-P-P as a donor of [14C]Araf for arabinan synthes
247 We used these findings to develop a novel ribosyl phosphate-modified derivative of c-di-GMP contai
249 ase in Bcl2-like protein 4, cleaved Poly ADP-Ribosyl Polymerase 1 and cleaved Caspase 3 levels with a
250 -regulated iNOS, nitrotyrosine, and poly-ADP-ribosyl polymerase expression and inhibited CAR-induced
251 peroxynitrite-poly-adenosine 5'-diphosphate ribosyl polymerase pathway contributes to the cellular i
252 ble nitric oxide synthase (iNOS) or poly(ADP-ribosyl) polymerase (PARP1) in only their marrow-derived
254 y an H. pylori toxin, the intrinsic poly(ADP-ribosyl) polymerase activity of PARP-1 is activated by a
257 rs) that recognize specific parts of the ADP-ribosyl posttranslational modification, and is removed b
260 ith varied C1'-N9, C1'-Ophosphate distances, ribosyl pucker configurations and N7-protonation states.
261 nsition states are characterized by C2'-endo ribosyl pucker, based on the beta-secondary [2'-(3)H] KI
264 ; anti-Hib capsular polysaccharide IgG, poly-ribosyl-ribitol-phosphate (PRP), IgG subclass, and cellu
265 (C1'-Ophosphate distance = 2.26 A), 2'-C-exo-ribosyl ring pucker and the O5'-C5'-C4'-O4' dihedral ang
266 tion by the substrate phosphodianion and the ribosyl ring, respectively, and an 8.6 kcal/mol stabiliz
268 a three-site mAC pharmacophore; the 2',3'-O-ribosyl substituent and the polyphosphate chain have the
269 bases, revealing an unprecedented effect of ribosyl substitution on electronic energy relaxation.
271 nuclear enzyme poly-adenosine 5'-diphosphate ribosyl synthetase, and eventual severe energy depletion
272 A nucleoside queuosine (Q), an unprecedented ribosyl transfer from the cofactor S-adenosylmethionine
276 It was shown in system (b) that oligo(ADP-ribosyl) transfer to histone H(1) is 1% of that of auto(
277 to significantly lower adenosine diphosphate ribosyl transferase (ADPRT)/PARP-1 activities in respons
278 either the receptor binding (CRM107) or ADP-ribosyl transferase (CRM197) activities do not inhibit t
279 osyl transferases, including human adenosine ribosyl transferase 5 (ART5) and Cholera toxin subunit A
283 stabilization, but DTA and PTA catalyze ADP-ribosyl transferase reactions more from ground-state des
284 Inhibition of the NAD(+) hydrolysis and ADP-ribosyl transferase reactions of DTA gave K(i) values fr
287 /NtrC, and DRAT (dinitrogenase reductase ADP-ribosyl transferase)-DRAG (dinitrogenase reductase-activ
288 catalyzed by the dinitrogenase reductase ADP-ribosyl transferase-dinitrogenase reductase-activating g
292 transition states previously reported for N-ribosyl transferases and is the first demonstration of a
293 ed PARP12, a member of a large family of ADP-ribosyl transferases, as an interferon-induced gene (ISG
294 N(tz)AD(+) also serves as a substrate for ribosyl transferases, including human adenosine ribosyl
295 d of science in motion-the field of poly(ADP-ribosyl) transferases (PARPs) and ADP-ribosylation.
296 unctions of intracellular mammalian mono(ADP-ribosyl)transferases, such as any ability to regulate Ab
297 ransfers (UDP-glucose), and electron and ADP-ribosyl transfers (NAD(P)H/NAD(P)(+)) to drive metabolic
300 cts predicted a 3'-endo conformation for the ribosyl zwitterion, corresponding to a H1'-C1'-C2'-H2' t
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