ライフサイエンスコーパス: segmentation

1 tions of neurons in the images are found via segmentation.

2 aps (28.02%-61.45%), and SUV (45.49%-45.63%) segmentation.

3 al clustering (SC), parametric maps, and SUV segmentation.

4 statistics, from sensory flow integration to segmentation.

5 exhibits striking heterogeneity in molecular segmentation.

6 ain an enhanced and denoised 7 T MRI for PVS segmentation.

7 junction was analyzed through semiautomated segmentation.

8 his distinctive and unusual pattern of axial segmentation.

9 tter volumetry was performed after automatic segmentation.

10 ysiological functions, influenced pronephros segmentation.

11 specified regions using semi-automated SDOCT segmentation.

12 cilitates automated three-dimensional neural segmentation.

13 guides user interactions to improve overall segmentation.

14 lana vitrectomy with or without delamination/segmentation.

15 aps (28.02%-61.45%), and SUV (45.49%-45.63%) segmentation.

16 age, and (ii) the absence of requirement for segmentation.

17 ellular signalling mutants, result in slower segmentation.

18 s to form in this agglomerate causing flawed segmentation.

19 xpression is required for neutrophil nuclear segmentation.

20 reased signalling levels, and observe faster segmentation.

21 DNNs and tailored specifically for EM image segmentation.

22 proved by problem layout that aids cognitive segmentation.

23 formed by a specialized cytokinesis known as segmentation.

24 ufficient image contrast necessary for image segmentation.

25 he PESE and DESE enhancers during Drosophila segmentation.

26 interactive data analysis, such as freehand segmentation.

27 surements of the growing germband throughout segmentation.

28 ng water-fat separated MR imaging and manual segmentations.

29 e the speed and accuracy of MRI-based rectum segmentations.

30 ompared with Dixon-based soft-tissue and air segmentation (-5.8% +/- 3.1) and anatomic CT-based templ

31 nvestigate if this deficit extends to object segmentation, a process implicated in visual word form r

32 on at fine scales, thereby greatly improving segmentation accuracy and producing comparable annotatio

33 dent validation dataset, the CNN showed high segmentation accuracy for reader1 (Dice Similarity Coeff

34 lt layer segmentations were used to evaluate segmentation accuracy of a normal macula of a white man

35 vergence; lithospheric faults driving margin segmentation act as windows through which inherited serp

36 A binary segmentation algorithm combined with a two-dimensional s

37 A semiautomated segmentation algorithm divided PR-OCTA into superficial,

38 An automated interface fluid segmentation algorithm evaluated intraoperative dynamics

39 , we described and validated an unsupervised segmentation algorithm for the assessment of tumor heter

40 We developed a calling pipeline based on a segmentation algorithm for the detection of these rearra

41 Here, a rapid nodule segmentation algorithm is presented.

42 a sample of) the input yields an approximate segmentation algorithm that is efficient enough for geno

43 The San Diego Automated Segmentation Algorithm was used to automatically segment

44 volumes were derived from a graph-cut based segmentation algorithm.

45 solution reconstruction, and an unsupervised segmentation algorithm.

46 tomographic images of the cytoskeleton by a segmentation algorithm.

47 ross-sections were segmented using automatic segmentation algorithms embedded in the SD-OCT systems.

48 Existing nodule segmentation algorithms employ machine learning that tra

49 ron microscopy and deep-learning-based image segmentation algorithms to visualize the distribution, a

50 thickness when using automated retinal layer segmentation algorithms without manual refinement.

51 Our biomarker quantification and nuclear segmentation algorithms, written in MATLAB, have also be

52 s and workflows for manual and semiautomated segmentation allow us to observe the spatial arrangement

53 Dual segmentation allows for massive parallelization, which l

54 mpared with CT: standard Dixon 4-compartment segmentation alone, Dixon with a superimposed model-base

55 uencing compositional variations and spatial-segmentation along the entire 1100 km-long Cascades Arc.

56 a semi-automated magnetic resonance imaging segmentation analysis pipeline to a 3-year longitudinal

57 7 T T2*-weighted imaging for cortical lesion segmentation and 3 T T1/T2-weighted myelin-sensitive ima

58 Custom T1 segmentation and a novel high-resolution gray matter par

59 CellECT provides tools for convenient segmentation and analysis of 3D+t membrane datasets by i

60 Robust methods for the segmentation and analysis of cells in 3D time sequences

61 this work is a novel method for interactive segmentation and analysis of microscopy data, which lear

62 The segmentation and analysis tools presented here generaliz

63 ction (MRAC) is generally conducted by image segmentation and assignment of discrete attenuation coef

64 automated cell lineaging and performed joint segmentation and cell tracking in entire Drosophila embr

65 e interpolation is used to correct errors in segmentation and check consistency of assigned identitie

66 We also performed manual segmentation and compared the results between the propos

67 lated for each patient using a 3-dimensional segmentation and computerized volumetry technique and co

68 shed method of voxel-based morphometry (VBM8 segmentation and diffeomorphic anatomical registration t

69 by extensive comparative analysis to manual segmentation and existing quantification tools and demon

70 vision approaches have been applied to cell segmentation and feature extraction, whereas machine-lea

71 al neuroscience as an objective basis for AR segmentation and for interpreting AR dynamics under vari

72 Prototype fully automated spinal segmentation and fracture detection software were then u

73 rototype software for fully automated spinal segmentation and fracture detection.

74 These networks also enable the simultaneous segmentation and identification of different mammalian c

75 datasets with a reliable method for membrane segmentation and no ability in programming required.

76 different methods, one based on large scale segmentation and one on meta-atom interleaving, and comp

77 l Imaging Toolbox is a powerful tool for the segmentation and processing of large spectral imaging da

78 phasors allowed for decomposition, unmixing, segmentation and quantification of our in vivo data from

79 st methods are lacking that enable automatic segmentation and quantification of PC shape parameters s

80 Segmentation and recognition of objects in a visual scen

81 Image segmentation and registration techniques have enabled bi

82 Retinal layer segmentation and resultant vascular image compared with

83 earthquake ruptures are controlled by fault segmentation and should motivate reevaluation of these i

84 hite matter hyperintensities using automated segmentation and summarized atrophy patterns using machi

85 formation about context (e.g., figure-ground segmentation and surround suppression) [2-5], and feedba

86 development and objective evaluation of cell segmentation and tracking algorithms.

87 have designed and implemented a toolkit for segmentation and tracking of cardiac waves in optical ma

88 Segmentation and tracking of cells in long-term time-lap

89 erformed better than other methods under the segmentation and tracking scenarios included in the chal

90 lenge results using performance measures for segmentation and tracking that rank all participating me

91 es such as image restoration, cell and crypt segmentation, and cancer grading.

92 ration of individual segments and throughout segmentation, and examine the relative contribution of n

93 cell nuclei is the basis of cell detection, segmentation, and feature extraction in high content mic

94 7T T2*-weighted imaging for cortical lesion segmentation, and neurological and cognitive evaluation.

95 they could be beneficial for interpretation, segmentation, and quantification of the PET/CT images.

96 passing-based inference handles recognition, segmentation, and reasoning in a unified way.

97 on, a machine learning-based classification, segmentation, and statistical modelling system was devel

98 ical uncertainties, specimen photobleaching, segmentation, and stitching inaccuracies.

99 They exert indentation, segmentation, and termination on the viscous sublayer st

100 This study sought to develop an automated segmentation approach based on histogram analysis of raw

101 ribe a novel hybrid behavioral-psychographic segmentation approach to segment stakeholders on potenti

102 tudy, we used a state-of-the-art hippocampal segmentation approach, and we found that patients with B

103 cation rate, particularly if delamination or segmentation are required.

104 User corrected segmentations are then propagated to neighboring time po

105 tissue probability maps to facilitate tissue segmentation as part of the standard preprocessing pipel

106 segmentation using Topcon Advanced Boundary Segmentation at 9 Early Treatment of Diabetic Retinopath

107 (intensity and/or phase) and type of retinal segmentation (automatic or manual).

108 ent of an object's features) and used manual segmentation based on a recently developed protocol to d

109 opose an improved system of nomenclature and segmentation boundaries for detailed 3-dimensional retin

110 of PAPC in chicken embryos disrupted somite segmentation by altering the CDH2-dependent epithelializ

111 as a method for registration and subsequent segmentation by validating it against the performance of

112 Segmentations can be propagated to multiple time points,

113 an easy-to-use software for automated image segmentation, cell tracking and quantitative analysis of

114 and replication labeling combined with image segmentation, centroid mapping and nearest-neighbor anal

115 Cell image segmentation (CIS) is an essential part of quantitative

116 Contrasting phenotypes in the segmentation clock and somite patterning of mutant mice

117 Together, our work argues that the segmentation clock behaves as an excitable system, intro

118 ation in regulating the output period of the segmentation clock by altering its spatial pattern.

119 lular, rhythmic patterning system termed the segmentation clock is thought to govern the sequential p

120 he rhythmic signaling pulse delivered by the segmentation clock is translated into the periodic morph

121 entation of the body axis is regulated by a "segmentation clock".

122 rtebrae, relies on a genetic oscillator (the segmentation clock) driving the rhythmic activity of sig

123 ting the role of collective processes in the segmentation clock.

124 Vertebrate somitogenesis is regulated by a segmentation clock.

125 Lobar segmentations delineated by major fissures on both CT sc

126 se hits provide insight into human vertebral segmentation disorders and myopathies.

127 concentration, genotype and timing to target segmentation disorders, birth defects that affect the sp

128 isk assessment model-based on age and SD OCT segmentation, drusen characteristics, and retinal pathol

129 mages were also reviewed for the presence of segmentation error in the central macular subfield, and

130 The fiber scaffold segmentation error was assessed by comparing fiber diame

131 retinal subfield thickness in the absence of segmentation error.

132 Identification and correction of segmentation errors in time-series data is of prime impo

133 jects received a T1 MP-FLASH scan for tissue segmentation followed by 31P MRS, chemical shift imaging

134 h example is the need for automated EM image segmentation for neurite reconstruction.

135 highlight of this tool is reliable membrane segmentation for probes that are rapidly internalized.

136 7 (mean +/- SD) between automated and manual segmentations from clinical experts and a mean correlati

137 s of kidney volumes in agreement with manual segmentations from clinical experts.

138 A set of pair-rule (PR) segmentation genes (PRGs) promotes the formation of alte

139 anscription factors encoded by the pair-rule segmentation genes.

140 The evolution of the human pattern of axial segmentation has been the focus of considerable discussi

141 eometrical dimensions of p-n legs, height of segmentation, hot-side temperature, and load resistance,

142 noise sensitivity in image registration and segmentation, however, our results indicate that appropr

143 If the vulnerability segmentation hypothesis holds within leaves, higher orde

144 e apply two existing methods to complete PVS segmentation, i.e., (1) vesselness-thresholding and (2)

145 e methods, such as image registration, image segmentation, identification of brain structures, implem

146 We develop here a framework for segmentation in arbitrary data domains that only require

147 he evolution and developmental regulation of segmentation in other arthropods, including insects.

148 undamentally similar mechanisms may underlie segmentation in short-germ and long-germ arthropods.

149 pose a model for growth zone dynamics during segmentation in which the growth zone is functionally su

150 measurements in xenograft tumors allows for segmentation into distinct tissues when using the novel

151 Nuclear segmentation is a hallmark feature of mammalian neutroph

152 Drosophila segmentation is a well-established paradigm for developm

153 opagated to multiple time points, and once a segmentation is available for a time sequence cells can

154 Because SC tumor segmentation is based on the intrinsic structure of the

155 Vertebrate segmentation is characterized by the periodic formation

156 lidation of automated image registration and segmentation is crucial for accurate and reliable mappin

157 This suggests that segmentation is impaired in readers with dyslexia but on

158 onality, we suggest that effective cognitive segmentation is important in all organized behavior, exp

159 ped versus saddle-shaped mitral annulus (MA) segmentation is more biomechanically appropriate to dete

160 Although the use of neural networks in image segmentation is not completely new, we developed novel i

161 genes encoding proteins that control nuclear segmentation is unclear.

162 me-PCR (qPCR) analyses, individual trabecula segmentation (ITS)-based analysis, finite element analys

163 ly 24GB RAM work well in 2017 for these dual segmentation jobs.

164 In addition, TWS can provide unsupervised segmentation learning schemes (clustering) and can be cu

165 manner, suggesting that this type of dynamic segmentation may be useful for integrated (epi)genome-wi

166 d functions, such as sequence plot, fragment segmentation, measure tool and meta-information display,

167 In this study, an automated segmentation method based on deep learning has been prop

168 Purpose To describe a fully automated segmentation method that yields object-based morphologic

169 lume limit of determinability of the applied segmentation method was a sphere volume of 0.16 mL.

170 ods and analysis and find that our automated segmentation method was not biased to prevent detection

171 e Mapper tracks objects independently of the segmentation method, detects mitosis in confluence, sepa

172 It is accordingly referred to as a "dual segmentation" method.

173 omparable results to previous automatic cone segmentation methods which utilized ad hoc rules for dif

174 le cells extremely challenging using current segmentation methods.

175 ve been proposed and implemented to evaluate segmentation methods.

176 ernated with erratic patterns resembling the segmentation motor pattern of the small intestine.

177 sults in a robust and efficient workflow, as segmentation need only be performed at one cardiac phase

178 biases in WES data, employing advanced novel segmentation, normalization and de-noising techniques th

179 a semiautomatic computation method based on segmentation of bones in CT and of lesions in PET.

180 Accurate segmentation of brain electron microscopy (EM) images is

181 atlases for completely automatic multi-atlas segmentation of fetal brain MRI.

182 software for simple, yet accurate, automated segmentation of fluorescent images, and automated data e

183 ep convolutional neural network designed for segmentation of glandular structures.

184 Volumetric segmentation of global gray matter, white matter, ventri

185 ens of cellular features can be derived from segmentation of hologram-derived images.

186 Material/Automatic lung segmentation of HRCT scans in 41 severe COPD patients (G

187 ce tomography (SD-OCT), supervised automated segmentation of individual retinal layers is possible.

188 parameters were obtained by using automated segmentation of multisection hyperpolarized (129)Xe MR v

189 dorsal macaque visual areas V2 and V3 in the segmentation of natural object stimuli and locally ambig

190 luated our method by participating in the 3D segmentation of neurites in EM images (SNEMI3D) challeng

191 Detecting nodules requires segmentation of nodule pixels from pixels showing sedime

192 In such scenes, colour contributes to the segmentation of objects from backgrounds, but does it al

193 The choriocapillaris segmentation of OCT-A revealed the presence of a hyperfl

194 However, automatic segmentation of polycystic kidneys is a challenging task

195 arning can perform accurate localization and segmentation of rectal cancer in MR imaging in the major

196 rning methods for automatic localization and segmentation of rectal cancers on multiparametric MR ima

197 To evaluate the segmentation of retinal layers among 3 OCT angiography i

198 graphy (OCT) angiography depends on accurate segmentation of retinal layers.

199 Semiautomated segmentation of short-axis cine images was used to creat

200 henomenon, we previously performed automated segmentation of songs but failed to detect the proposed

201 Except semi-automatic segmentation of the AAA and intraluminal thrombus (ILT)

202 finement" to correct errors in the automated segmentation of the anterior (internal limiting membrane

203 y normalized gray matter image obtained from segmentation of the baseline T1-weighted volumetric MRI.

204 ate development, the sequential and rhythmic segmentation of the body axis is regulated by a "segment

205 e effects, if well-regulated, do not prevent segmentation of the current best TE materials from being

206 The approach is based on a segmentation of the image data and focuses on classifyin

207 Rapid, remote, automated segmentation of the images was performed using custom op

208 imodal retinal imaging including en face OCT segmentation of the inner nuclear layer was performed in

209 nition of the mitral valve plane (VP) during segmentation of the left ventricle for SPECT myocardial

210 es and global object context, to compute the segmentation of the scene.

211 biased by the arbitrary, language-dependent segmentation of the signal, and virtually precludes the

212 mean sensitivity and specificity values for segmentation of the SLA surface images were 0.80 +/- 0.1

213 Freesurfer automated segmentation of the subcortical surface was carried out

214 The periodic segmentation of the vertebrate body axis into somites, a

215 The segmentation of time series and genomic data is a common

216 RAT) volumes were generated by semiautomated segmentation of total RPEDC within a 5-mm-diameter macul

217 s sequencing BAM file post-processing, joint segmentation of total- and allele-specific read counts,

218 his method is capable of generating accurate segmentations of large MSI data sets acquired on the new

219 FLAB-based segmentation on static (18)F-FDG PET images is in best a

220 normal limits) between scans with automated segmentation only and scans using manual refinement.

221 Automated segmentation only resulted in a thinner global RNFL thic

222 y circle, and exported the native "automated segmentation only" results.

223 ed and related either to motion integration, segmentation or transparency.

224 Accurate whole-brain segmentation, or brain extraction, of magnetic resonance

225 any phenotypes, including neurodegeneration, segmentation, patterning and planar polarity defects.

226 While many automated methods for segmentation perform very well, few generalize reliably

227 retinal layers and we rated individual layer segmentation performance by random effects meta-analysis

228 The segmentation performance for grey matter at C2/C3 level

229 We address reconstruction and segmentation performance on samples with different size,

230 The experimental results show that the PVS segmentation performances can be significantly improved

231 g gene expression wave pattern and shortened segmentation period, producing embryos with more, shorte

232 We identify molecular pathways and segmentation phenotypes, which we share in an open-acces

233 interest in whole slide tissue images, run a segmentation pipeline on the selected regions to extract

234 r estimations and output variations in image segmentation pipelines.

235 h popular existing architectures for several segmentation problems, showing that the proposed archite

236 timated with an advanced multiatlas regional segmentation procedure, and voxelwise volumetric analyse

237 Existing segmentation procedures typically detect more than 90% o

238 ut images underwent a 4-step automated image segmentation process consisting of stationary noise remo

239 As a result, no image segmentation processing is needed for further analysis o

240 that incorporates two different multi-atlas segmentation propagation and fusion techniques: The Opti

241 A standardized segmentation protocol for the D-shaped MA was developed

242 ve pressure, but its hydraulic vulnerability segmentation provides significant protection of the pere

243 ted to solve SCD, which consider only one of segmentation quality or partition quality.

244 tissue microarrays, including algorithms for segmentation, quantification, and heterogeneity analysis

245 A pitch segmentation recognition method combined with different

246 tasks when running an analysis job with dual segmentation reduces the size, scope and execution time

247 Moreover, we demonstrate that successful segmentation requires a smooth change of compatibility f

248 from standardized grading and semiautomated segmentation, respectively, at baseline.

249 fMOP knockdown, parasites undergo incomplete segmentation resulting in a residual agglomerate of part

250 illions of points and improve the quality of segmentation results (Dice and Jaccard metrics) by as mu

251 s and enables manual correction of automatic segmentation results or direct import of manually segmen

252 ith 414 pairs of images with cells and their segmentation results, and with 4968 movies with animated

253 incorporates various cardiac and mediastinal segmentation schemes in which upper and lower limits of

254 ndently perform all steps of automated image segmentation, semi-automated user-guided error correctio

255 The segmentation slab designed to isolate the superficial va

256 Using semiautomated LN segmentation software (Fraunhofer MEVIS), we measured no

257 te the accuracy of the macular retinal layer segmentation software of the Spectralis spectral-domain

258 rcial software and a Stanford pixel-by-pixel segmentation software that also provided topographic map

259 at the macular level, the automated retinal segmentation software was applied to determine thickness

260 Dedicated 3-dimensional segmentation software was used to obtain total hemispher

261 Semi-automated retinal segmentation software was used to quantify macular sub-l

262 milarity and Truth Estimation for Propagated Segmentations (STEPS) algorithm for segmenting white and

263 menting with and optimizing dataset-specific segmentation strategies during imaging.

264 A proposal for an improved segmentation strategy is presented.

265 Because of inherent errors in segmentation, studies of the superficial and deep vascul

266 ith low SD OCT signal-to-noise ratio and low segmentation success certainty.

267 maximum pixel (SUVmean_30%), gradient-based segmentation (SUVmean_gradient), the maximum pixel (SUVm

268 analysis software (Topcon Advanced Boundary Segmentation [TABS]; Topcon GB) to generate macular thic

269 to achieve superior performance on EM image segmentation tasks.

270 After a neoteric segmentation technique allowing accurate volume estimati

271 PFV was determined using a segmentation technique on contiguous T1-weighted axial M

272 we propose a new fully automated spinal cord segmentation technique that incorporates two different m

273 e-dimensional (3D) computed tomographic (CT) segmentation techniques to help differentiate lung adeno

274 lopment of tools and file formats to support segmentation (that is, the decomposition of a three-dime

275 mic classification; genome length, type, and segmentation; the presence or absence of an outer envelo

276 etwork can switch from motion integration to segmentation, thus being able to compute either a single

277 hree experts, we report the accuracy of cell segmentation to be 96.4% with 94.3% precision, and the a

278 vel and Bayesian information criterion-based segmentation to detect both somatic and germline CNVs ac

279 ference for anatomy and for registration and segmentation, to aid in connectivity analysis, and for g

280 The core segmentation tool is watershed-based and allows the user

281 A gradient-based segmentation tool was used to contour each patient's pri

282 ual rating scale and an automated volumetric segmentation tool.

283 Processing these images requires automated segmentation, tracking and lineaging algorithms.

284 oblem, we have introduced the Trainable Weka Segmentation (TWS), a machine learning tool that leverag

285 s, 27 histone marks, and 21 chromatin states segmentation types.

286 a measure may be obtained by means of image segmentation using magnetic resonance imaging (MRI).

287 ithelium-BM thickness, as measured by SD OCT segmentation using Topcon Advanced Boundary Segmentation

288 mpartmental modeling parametric maps and SUV segmentations using simulations of clinically relevant t

289 Volumetric analysis with automated segmentation was used to confirm radiologic interpretati

290 n with machine learning algorithm based cell segmentation, we examine expression of 35 genes at singl

291 investigate whether Notch regulates nephron segmentation, we performed Notch loss-of-function and ga

292 Arterial narrowing and segmentation were seen in all quadrants.

293 Triton DRI OCT platforms with default layer segmentations were used to evaluate segmentation accurac

294 nspect and manually refine OCT retinal layer segmentation when assessing RNFL thickness in the manage

295 int the required density for reasonable tree segmentation (where accuracy plateaus).

296 er (an open source software suite) automated segmentation, which estimates the volume of predefined c

297 that supplements standard Dixon-based tissue segmentation with a superimposed model-based bone compar

298 to cardiac CT, 3D-TEE allows for D-shaped MA segmentation with no systematic difference in MA dimensi

299 Automated segmentation without manual refinement resulted in reduc

300 The experiments with two segmentation workflows show that the proposed approach c