ライフサイエンスコーパス: short tandem repeat

1 d by deletion of a single repeat unit from a short tandem repeat.

2 2 highly variable HLA class II regions and 5 short tandem repeats.

3 corresponding to complex insertions and long short tandem repeats.

4 ed with the accumulation of deletions within short tandem repeats.

5 onor origin in three of the five analyzed by short-tandem repeats.

6 The results indicate that two polymorphisms, short tandem repeat 1 and insertion/deletion polymorphis

7 from the controls in the frequencies of nine short tandem-repeat alleles.

8 Analysis of short tandem repeats also detected polymorphisms that su

9 mission and remain 100% donor as assessed by short tandem repeat analysis of the marrow 6 and 12 mont

10 Spectral karyotyping and short tandem repeat analysis of the UISO cells matched t

11 CTG18.1 was genotyped using a combination of short tandem repeat analysis, triplet repeat-primed poly

12 arting genomes available for subsequent STR (short tandem repeat) analysis by a whole genome amplific

13 framework for cell line annotation linked to short tandem repeat and single nucleotide polymorphism p

14 One hundred four short tandem repeat and STS markers have been localized

15 n-B DNA-forming motifs coverage by including short tandem repeats and adds key visualization tools to

16 s motifs predicted to form static DNA bends, short tandem repeats and homo(purine*pyrimidine) tracts

17 characterizing repetitive sequences, such as short tandem repeats, and aiding contig assembly in sequ

18 cleotide variants, insertions and deletions, short tandem repeats, and copy number variants.

19 Short tandem repeats are among the most polymorphic loci

20 Insertion-deletion polymorphisms at these short tandem repeats are common (80% of repeats examined

21 ical strains were genotyped according to the short tandem repeats assay.

22 mammals in possessing a segment of related, short tandem repeats at a defined location, but in Tupai

23 tranded DNA, and vWF, TH01, TPOX, and CSF1PO short tandem repeats can be separated with single-base r

24 Molecular analysis based on 15 short tandem repeats confirmed the size of the duplicati

25 random genome-wide search using polymorphic short tandem repeats demonstrated linkage with D14S121 (

26 We present the use of short tandem repeat DNA "fingerprinting" technology as a

27 hnology (NIST) has compiled and maintained a Short Tandem Repeat DNA Internet Database since 1997 com

28 ted instrument for the analysis of multiplex short tandem repeat DNA profiles from reference buccal s

29 The use of expert systems to interpret short tandem repeat DNA profiles in forensic, medical an

30 romosomes and are composed of long tracks of short tandem repeat DNA sequences bound by a unique set

31 the genomic DNA inserts from the 34 YACs, 13 short tandem repeats, eight expressed sequence tags, and

32 rge insertions, small indels (10-50 bp), and short tandem repeat expansions and contractions.

33 Short tandem repeats for DNA fingerprinting represents a

34 ication was done for nine highly polymorphic short tandem repeats for each specimen and a unique DNA

35 luorescence-based detection of the amplified short tandem repeat fragments and subsequent analysis of

36 Through single nucleotide polymorphism and short tandem repeat genotype analysis we demonstrate tha

37 electrophoresis devices allow us to perform short-tandem-repeat genotyping assays in under 2 min and

38 tagged site mapping, and binary-marker and Y-short tandem repeat haplotyping to understand the struct

39 ngth resulting from variations in numbers of short tandem repeats has been shown to provide a high le

40 xamine haplotype distributions defined by 12 short tandem repeats in a sample of 1269 men from 41 Ind

41 her two polymorphisms, GXAlu and EVI-20, are short tandem repeats in intron 27b.

42 their 3' coding regions that differ from the short tandem repeats in other vlp genes yet retain struc

43 r HLA genes simultaneously with analysis for short tandem repeats in the HLA region to select and tra

44 We show the presence of numerous short tandem repeats in the human cytomegalovirus (HCMV)

45 le population genetic studies of eukaryotes, short tandem repeats known as microsatellites, have been

46 Nuclear short tandem repeat loci also show evidence of this expa

47 Short tandem repeat loci tightly linked to candidate gen

48 to 5 bp are referred to as microsatellite or short tandem repeat loci.

49 Three short-tandem-repeat loci, vWA, THO1, and TPOX, are coamp

50 G861C polymorphism and for a closely linked short-tandem repeat locus, D6S284.

51 to an intravenous glucose challenge and the short tandem repeat marker D1S198, indicative of a genet

52 70 kindreds was completed using deCODE 1100 short tandem repeat marker set at an average 4-cM densit

53 Genetic linkage analysis used 167 short tandem repeat markers (STRPs) spaced throughout th

54 Genotyping of five short tandem repeat markers in the region was performed

55 veloping and typing 116 gene-specific and 12 short tandem repeat markers on the 5,000-rad horse x ham

56 ies with genetically confirmed DM2, using 19 short tandem repeat markers that we developed that flank

57 Here, we used short tandem repeat markers to explore fine-scale geneti

58 ith available genotypes on approximately 400 short tandem repeat markers using a general pedigree var

59 A genome-wide scan using 387 short tandem repeat markers was conducted for obesity am

60 malian Genotyping Service at Marshfield (404 short tandem repeat markers).

61 the DPD1 gene to a 3.2-cM region flanked by short tandem repeat markers, D19S881 and D19S718.

62 es feasible with currently available sets of short tandem repeat markers, spaced at intervals as larg

63 oss of single nucleotide polymorphism and/or short tandem repeat markers.

64 e form of KCS was performed with polymorphic short tandem repeat markers.

65 s PCR template for a genome wide screen with short tandem repeat markers.

66 nome using a first-generation genetic map of short tandem repeat markers.

67 We genotyped 15 short tandem-repeat markers evenly spaced in the 112 cM

68 To map the modifier loci, we typed 811 short-tandem repeat markers ( approximately 5 cMdense) i

69 d sibling pairs with T2D using 372 autosomal short-tandem repeat markers at an average spacing of 9 c

70 Linkage analysis between short-tandem repeat markers on chromosome 19 and COPD ph

71 We genotyped 5 short-tandem-repeat markers that spanned a 4.4-centimorg

72 fferences most often due to mutations in the short-tandem-repeat markers, although some likely instan

73 ion divergence over a 6000 km distance using short tandem repeat (microsatellite) loci and allozyme l

74 logy recently evaluated the performance of a short tandem repeat multiplex with dried whole blood sta

75 files are constructed using microsatellites, short tandem repeats of 2-5 bases.

76 ses a total of 175 markers (139 genes and 36 short tandem repeats, of which 53 are fluorescence in si

77 78% of which carried long runs of degenerate short tandem repeats, often several kilobases in length,

78 r, genetic linkage analysis with polymorphic short tandem repeats on the long arm of chromosome 17 re

79 The non-B DNA structures formed by short tandem repeats on the nascent strand during DNA re

80 recovered from personal genomes by profiling short tandem repeats on the Y chromosome (Y-STRs) and qu

81 telomerase, an enzyme system that generates short, tandem repeats on the ends of chromosomes, other

82 Six novel polymorphisms, including two short tandem repeats, one 4-nucleotide insertion/deletio

83 sed as the template for PCR amplification of short tandem repeat polymorphic markers (STRPs).

84 were pooled and used as the PCR template for short tandem repeat polymorphic markers (STRPs).

85 Segregation patterns of short tandem repeat polymorphic markers from four chromo

86 Using short tandem repeat polymorphism (STR) markers with hete

87 directly sequenced to design PCR primers for short tandem repeat polymorphism (STRP) analysis of fami

88 Haplotypes consisting of alleles at a short tandem repeat polymorphism (STRP) and an Alu delet

89 amount and extent of LD among 5048 autosomal short tandem repeat polymorphism (STRP) loci ascertained

90 re examined for loss of heterozygosity using short tandem repeat polymorphism (STRP) markers.

91 Whole genome short tandem repeat polymorphism (STRP) screening showed

92 oduction with certain alleles of the IL-10.R short tandem repeat polymorphism at -4.0 kb suggested th

93 c.828+3A>T mutation, which extends from the short tandem repeat polymorphism D6S282 to c.1013G>A (rs

94 differences across the approximately 900 kb, short tandem repeat polymorphism data indicate a very re

95 Phenotypes and genotypes at 1107 short tandem repeat polymorphism markers were obtained f

96 CD4 locus on chromosome 12 that consist of a short tandem-repeat polymorphism and an Alu insertion/de

97 analyzed 16 of the t(11;22) families, using short tandem-repeat-polymorphism markers on both chromos

98 dred and thirty-one tri- and tetranucleotide short tandem repeat polymorphisms (STRPs) developed by t

99 we completed genetic linkage analysis using short tandem repeat polymorphisms (STRPs) distributed ov

100 ding single nucleotide polymorphisms (SNPs), short tandem repeat polymorphisms (STRPs), variable numb

101 Fifteen new short tandem repeat polymorphisms and 2 biallelic polymo

102 ent) in which previous linkage studies using short tandem repeat polymorphisms failed to identify a d

103 ons, and linkage analysis was performed with short tandem repeat polymorphisms flanking these genes.

104 Our purpose was to evaluate inherited short tandem repeat polymorphisms of the insulin-like gr

105 de polymorphisms (SNPs) and microsatellites (short tandem repeat polymorphisms or STRPs) are used to

106 ed in AIDS cohorts for candidate gene-linked short tandem repeat polymorphisms revealed significant g

107 n, paternity was established by analyzing 24 short tandem repeat polymorphisms.

108 Two dinucleotide short tandem-repeat polymorphisms (STRPs) and a polymorp

109 ight CEPH families; they incorporated >8,000 short tandem-repeat polymorphisms (STRPs), primarily fro

110 Using genotypes from nearly 8,000 short tandem-repeat polymorphisms typed in eight of the

111 Genotyping of Weber Screening Set 9 (387 short tandem-repeat polymorphisms with average spacing a

112 tic distances based on Alu and nuclear RSPs, short tandem-repeat polymorphisms, and mtDNA, in the sam

113 tion-site polymorphisms (RSPs), 60 autosomal short-tandem-repeat polymorphisms (STRPs), 13 Alu-insert

114 this idea, we measured associations between short-tandem-repeat polymorphisms (STRPs), which can mut

115 Estimates from short-tandem-repeat polymorphisms have negligible bias,

116 rkers with heterozygosity similar to that of short-tandem-repeat polymorphisms.

117 The short tandem repeat profile is a simple numerical code t

118 mplete autosomal STR and Y-STR (Y chromosome short tandem repeat) profiles were routinely obtained wi

119 We adopted a commercially available short tandem repeat profiling methodology to cynomolgus

120 Here, we developed STR-FM, short tandem repeat profiling using flank-based mapping,

121 ytometry, immunofluorescence microscopy, and short tandem repeat profiling.

122 search institutes worldwide were analyzed by short tandem repeat profiling.

123 ximal sequences common to rye and wheat, the short tandem-repeat pSc119.2 and rDNA sequence pTa71, sh

124 on of each unit was measured by quantitative short tandem repeat region analysis.

125 Nearly single base resolution of short tandem repeats relevant to human identification is

126 rminal segment; a central segment containing short tandem repeats rich in cysteine, proline, glutamin

127 Mutations at short tandem repeat sequence loci confound interpretatio

128 forensic analyses, sex chromosomal (X and Y) short tandem repeat sequences and mitochondrial DNA sequ

129 Short tandem repeat sequences have relatively limited in

130 Microsatellites are short tandem repeat sequences that are highly prone to e

131 Instability at short tandem repeat sequences, microsatellites, is a typ

132 ates of frameshift mutations are observed in short tandem repeat sequences.

133 We propose that rearrangements between short tandem repeated sequences occur by errors made dur

134 ic DNA at the ends of chromosomes consist of short, tandem repeat sequences.

135 Short tandem repeat (STR) alleles are popular for use as

136 describe a method for the discrimination of short tandem repeat (STR) alleles based on active microa

137 able of accurately determining the length of short tandem repeat (STR) alleles.

138 he Mer knockdown lines were authenticated by short tandem repeat (STR) analysis before publication, t

139 centration process is developed for forensic short tandem repeat (STR) analysis using a streptavidin-

140 length was determined by direct sequencing, short tandem repeat (STR) assay and Southern blotting.

141 ping community with details on commonly used short tandem repeat (STR) DNA markers.

142 ophoretic (ME) separation for rapid forensic short tandem repeat (STR) forensic profiling in a single

143 c device for amplification and separation of short tandem repeat (STR) fragments as well as an instru

144 to examine the genomic region for additional short tandem repeat (STR) genetic markers in order to cl

145 hromosome haplogroup analyses coupled with Y-short tandem repeat (STR) haplotypes were used to (1) in

146 Recently, short tandem repeat (STR) length polymorphisms have been

147 mirates (UAE) were typed across 15 autosomal short tandem repeat (STR) loci (D8S1179, D21S11, D7S820,

148 polymorphisms have many advantages over the short tandem repeat (STR) loci currently used to assay g

149 cat breeds was assessed utilizing a panel of short tandem repeat (STR) loci genotyped in 38 cat breed

150 lated data based on allele frequencies in 12 short tandem repeat (STR) loci in four populations in Ar

151 , and Zambia and additionally genotyped four short tandem repeat (STR) loci that flank the lactase en

152 The PCR amplification of tetranucleotide short tandem repeat (STR) loci typically produces a mino

153 A panel of 11 short tandem repeat (STR) loci with repeat units of 1, 2

154 leotide polymorphisms (SNPs) and exactly one short tandem repeat (STR) locus.

155 ide search using a set of highly polymorphic short tandem repeat (STR) markers and 19 affected indivi

156 " cataracts segregating in a white family to short tandem repeat (STR) markers D20S847 (LOD score [Z]

157 band, as well as genotyping a battery of 387 short tandem repeat (STR) markers distributed across the

158 ory of these mutations in the AJ population, short tandem repeat (STR) markers were used to map a 9.3

159 castes is low (RST = 0.96% for 45 autosomal short tandem repeat (STR) markers), reflecting a largely

160 ome-wide search using 241 highly polymorphic short tandem repeat (STR) markers, 13 of the 14 affected

161 isible with the usual cell authentication by short tandem repeat (STR) markers.

162 al interval was established by genotyping of short tandem repeat (STR) microsatellite markers.

163 An autosomal 10 cM genome-wide scan of short tandem repeat (STR) polymorphic markers was analyz

164 types, an autosomal 10-cM genomewide scan of short tandem repeat (STR) polymorphic markers was perfor

165 Genotyping based on short tandem repeat (STR) regions is used in human ident

166 alysis of an eight-loci, two-color multiplex short tandem repeat (STR) system for human identificatio

167 A short tandem repeat (STR) typing method is developed for

168 Such applications include multiplex short tandem repeat (STR) typing, which is demonstrated

169 Short tandem repeat (STR) variants are highly polymorphi

170 Short tandem repeat (STR) variation has been proposed as

171 ronic microdeletion and a highly polymorphic short tandem repeat (STR) within its breakpoints.

172 and corresponding non-tumor (N) tissue using short tandem repeat (STR)-microsatellites and restrictio

173 The polymorphisms in the test data are short tandem repeats (STR) and are multi-allelic (someti

174 Functional short tandem repeats (STR) are polymorphic in the popula

175 we constructed a haplotype of 10 polymorphic short tandem-repeat (STR) markers flanking the BRCA2 loc

176 e-wide scan with a set of highly polymorphic short tandem-repeats (STR) in individuals from five well

177 Short-tandem repeat (STR) allelic intensities were colle

178 A genome-wide scan of 380 short-tandem repeat (STR) markers was performed in eight

179 Previous studies have shown that specific short-tandem-repeat (STR) and single-nucleotide-polymorp

180 We identified polymorphisms in 15 out of 25 short-tandem-repeat (STR) loci previously selected by in

181 ll line authentication, but only one method (short tandem repeat [STR] profiling) has been the subjec

182 New short tandem repeats (STRs) and additional DNA samples w

183 y measurement of marker associations with 15 short tandem repeats (STRs) and an insertion/deletion po

184 Short tandem repeats (STRs) are found in many prokaryoti

185 Short tandem repeats (STRs) are highly mutable genetic e

186 Short tandem repeats (STRs) are highly variable elements

187 Short tandem repeats (STRs) are hyper-mutable sequences

188 Short tandem repeats (STRs) are implicated in dozens of

189 Short tandem repeats (STRs) are mutation-prone loci that

190 allelic profiling assay for the analysis of short tandem repeats (STRs) by using a highly optimized

191 Single nucleotide polymorphisms (SNPs) and short tandem repeats (STRs) differ in mutation rate and

192 Some untranslated sequence (UTR)-localized, short tandem repeats (STRs) exhibit evidence of selectio

193 Short tandem repeats (STRs) have a wide range of applica

194 pping by assessing allele frequencies of 744 short tandem repeats (STRs) in African Americans, Hispan

195 Length variation in short tandem repeats (STRs) is an important family of DN

196 pectrometry as a new approach for genotyping short tandem repeats (STRs) is demonstrated.

197 g single-nucleotide polymorphisms (SNPs) and short tandem repeats (STRs) on the nonrecombining portio

198 The analysis of short tandem repeats (STRs) plays an important role in f

199 2,563 genome-wide SNPs and the other with 13 short tandem repeats (STRs) used in forensic application

200 We reported that distinct, short tandem repeats (STRs) were coupled with rigorous p

201 Over 100 biallelic markers and 19 chromosome short tandem repeats (STRs) were genotyped to produce a

202 satellites are multi-allelic and composed of short tandem repeats (STRs) with individual motifs compo

203 Short tandem repeats (STRs), also known as microsatellit

204 availability of large data sets derived from short tandem repeats (STRs), insertion deletion polymorp

205 For 2-bp microsatellites or short tandem repeats (STRs), standard deviations of +/-0

206 Identifying large expansions of short tandem repeats (STRs), such as those that cause am

207 deletion insertion polymorphisms (DIPs), and short tandem repeats (STRs), suitable for linkage or ass

208 es of engraftment based on identification of short tandem repeats (STRs), variable number of tandem r

209 a genome-wide survey of the contribution of short tandem repeats (STRs), which constitute one of the

210 NPs), insertions and deletions (indels), and short tandem repeats (STRs)--have been extensively repor

211 de polymorphisms (SNPs), microsatellites (or short tandem repeats, STRs) have received great attentio

212 Microsatellites are short tandem repeats that are widely dispersed among euk

213 Microsatellites are short tandem repeats that evolve predominantly through a

214 for the purpose of molecular typing by using short tandem repeats; the success rate was increased fro

215 ements of the titins and is also composed of short tandem repeats, this suggests that the repeat moti

216 lencers and enhancers between closely linked short tandem repeats TNFd and TNFe.

217 Short tandem repeats (TRs), or microsatellites, are ofte

218 by pseudoknots of antitoxic RNA, encoded by short tandem repeats upstream of the toxin gene.

219 chromosome (20 biallelic polymorphisms and 5 short tandem repeats) variation in approximately 265 mal

220 leotide polymorphisms (Y-SNPs) and seventeen short tandem repeat (Y-STR) loci.

221 forensic pedigree searches with Y-chromosome short tandem repeat (Y-STR) profiling in large-scale cri

222 Recombination between very short tandem repeats yields exclusively the monomeric pr

223 opulation samples by detecting Y-chromosomal short tandem repeat (YSTR) allele duplications within th