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1 in 11 additional individuals (including one sib-pair).
2 SM-IV OCD definite and probable; 50 affected sib pairs).
3 ans without diabetes (from 162 families, 750 sib-pairs).
4 ring two alleles IBD at a putative QTL for a sib-pair.
5 ngs (study participants), forming an exposed sib-pair.
6 in an additional 140 families with affected sib pairs.
7 rkers in nuclear families and in independent sib pairs.
8 enotype data were developed for sib and half-sib pairs.
9 umber of putative sib pairs are not actually sib pairs.
10 or all the association in age of onset among sib pairs.
11 icant correlation in the ages of onset among sib pairs.
12 oint marker allele-sharing probabilities for sib pairs.
13 nd common diseases, with samples of affected sib pairs.
14 eir relatives, in a sample that included 369 sib pairs.
15 sets of affected relatives, such as affected sib pairs.
16 e all significantly correlated in concordant sib pairs.
17 i and 1.45 to MODY3-linked loci in Caucasian sib pairs.
18 ait loci in humans, using extreme discordant sib pairs.
19 s or in an analysis restricted to discordant sib pairs.
20 ntitative traits, such as extreme discordant sib pairs.
21 th three or more affected sibs compared with sib pairs.
22 porating 530 families and up to 736 affected sib pairs.
23 of the linkage evidence derives from the CA sib pairs.
24 present in one sibling within each of the 45 sib-pairs.
25 ising of 278 families, 634 siblings, and 470 sib-pairs.
26 The panel contains 350 siblings and 245 sib-pairs.
27 ed independently in a study of affected LOAD sib-pairs.
28 comprises rare but highly efficient extreme sib pairs (207 discordant, 258 high concordant, and 99 l
31 ning 48 cM across chromosome 18q12-q22 in 81 sib pairs affected with autoimmune thyroid disease (AITD
32 reported a two-stage genomewide screen of 48 sib pairs affected with intracranial aneurysms (IAs) tha
33 e-wide nonparametric linkage analysis of 480 sib-pairs affected with type 2 diabetes revealed linkage
35 ngly suggests that one should incorporate EC sib pairs along with ED sib pairs, in both design and an
36 with a sample size expanded to 139 affected sib pairs, along with 83 other affected relative pairs (
37 009), SimWalk2 Statistic A (P = 0.0002), and sib-pair analyses (maximum likelihood score = 6.07) all
46 imum LOD scores (MLS) obtained from affected-sib-pair analysis of all 345 families yielded suggestive
56 design to include unaffected and discordant sib pairs, analytical power and robustness to type I err
57 hen 50% of families consisted of an affected sib pair and one parent genotyped under an additive gene
58 multipoint identity by descent (IBD) between sib pairs and false-positive evidence for multipoint mod
60 d4;) by genotyping extremely concordant (EC) sib pairs and including them along with ED sib pairs in
62 nflation as a function of the resemblance of sib pairs and the criteria for discordance used for sele
64 y of each of the three loci in 66 discordant sib pairs and were analyzed with multipoint methods.
68 type model (DSM-IV OCD definite; 41 affected sib pairs) and a broad phenotype model (DSM-IV OCD defin
70 virtue of the sampling design, the number of sib pairs, and the availability of genotyped parents, th
74 Multipoint analysis, designating all AITD sib pairs as affected, showed a peak NPL score of 3.46 (
75 based on affected, discordant, or unaffected sib pairs, as well as on pairs defined by threshold valu
76 n 34 extended families (297 individuals, 349 sib pairs) ascertained through index cases with neovascu
79 3.93 on chromosome 18, a two-point affected sib pair (ASP) LOD score of 3.11 on chromosome 16, sever
80 s not inflate type I error rates of affected sib pair (ASP) statistics in the whole parameter space,
81 known, "model free" methods-such as affected sib pair (ASP) tests-are often preferred over LOD-score
82 ers on chromosome 21q, single-locus affected-sib-pair (ASP) analysis detected a high proportion (57%-
84 fits and costs of stratification of affected-sib-pair (ASP) data were examined in three situations: (
87 est (TDT) has higher power than the affected-sib-pair (ASP) mean test when linkage disequilibrium (LD
89 in 187 and 356 families containing affected sib pairs (ASPs) yielded apparently conflicting results,
90 are available for unrelated cases, affected sib pairs (ASPs), or only one sibling per Asp. We constr
91 parents, containing 97 independent affected sib pairs (ASPs), with follow-up in 49 additional multip
94 ary to obtain a power of 80% with concordant sib pairs at a significance level of .0001 are given, st
96 tipoint analysis done for all low-concordant sib pairs available showed that the maximal logarithm of
98 f association in family triads or discordant sib pairs but are not theoretically valid in multiplex f
99 xamine further the use of extreme concordant sib pairs but consider the effect of parents' phenotypes
100 al correlation of the quantitative trait for sib pairs but considerably less on the allele frequency
101 ed to QTL analysis, with a new sample of 126 sib pairs, by means of a multipoint mapping method and e
102 ive-compulsive disorder) was conducted on 77 sib pairs collected by the Tourette Syndrome Association
103 These algorithms cannot be applied in many sib-pair collections, because of lack of parental-genoty
105 analysis was carried out in a sample of 497 sib pairs concordant for recurrent major depressive diso
106 sociation, with simultaneous modeling of the sib-pair covariance structure for a test of linkage.
115 ise and multipoint methods for regression of sib-pair differences in identity by descent, as well as
117 ter space, and that, in any case, discordant sib pairs (DSPs) can be used to control for marker-marke
118 naffected sibs, which provided 51 discordant sib pairs (DSPs) for the initial screen and 29 for the f
119 sed tests of association that use discordant sib pairs (DSPs) in which one sib is affected with a dis
120 families (including 250 full-sib and 46 half-sib pairs), each with at least one individual with opioi
121 have proposed the use of extreme discordant sib pairs (EDSPs) for mapping quantitative trait loci in
124 titative-trait loci (QTLs) by use of extreme sib pairs (ESPs) is shown to be a function of the three
125 nts, affected sib pair, extremely discordant sib pairs, etc.) that truncate all "negative evidence ag
126 methods (e.g., variance components, affected sib pair, extremely discordant sib pairs, etc.) that tru
127 se are false positive results, all available sib pair families (n = 429) were typed using a 92% infor
128 osome regions to type 1 diabetes in affected sib pair families have revealed that the major susceptib
129 was performed with data from 67 keratoconus sib pair families with 110 affected sib pairs of white o
131 undertook a genomewide scan in 158 Canadian sib-pair families and identified three regions of sugges
132 dy of mainly paucibacillary leprosy-affected sib-pair families from South India, in addition to the e
133 pping, linkage was evaluated in 385 affected sib-pair families using 13 evenly spaced polymorphic mic
134 combined analysis of MN cohorts 1 and 2 (187 sib-pair families) showed that markers in 6p11-p21 (D6S4
138 families recruited on the basis of affected sib pairs for asthma reveal significant association for
139 both the selection of maximally informative sib pairs for genotyping and the subsequent analysis of
140 hundred fifteen nuclear families yielded 870 sib pairs for linkage, with significant logarithm of odd
141 ecting the sampling scheme, such as affected sib pairs, for qualitative traits, or extreme discordant
143 hort arm of chromosome 8 (P = 0.002, n = 125 sib-pairs, for the haplotype generated from two simple s
144 yses of 10 markers in 345 full- and 219 half-sib pairs from 29 multiplex Afro-Caribbean families prov
147 e to the 6p25-21.3 region in a sample of 181 sib pairs from 82 nuclear families that were selected on
148 ymorphisms (SNPs) and 50K transcripts in 400 sib pairs from the MRCA family panel, has been widely us
151 posed sib-pair was matched up to 5 unexposed sib-pairs from the Multi-Generation Registry by birth an
153 n two sets of data: (1) 325 individuals (225 sib pairs) from the Beaver Dam Eye Study (BDES), and (2)
154 a subset of families (102 families; n = 224 sib pairs) from the Beaver Dam Eye Study and performed a
155 e Study (BDES), and (2) 297 individuals (346 sib pairs) from the Family Age Related Maculopathy Study
158 es, for linkage analysis to obesity, and 236 sib pairs in 82 nuclear families, for linkage analysis t
161 629 women from 311 extended families (1,242 sib pairs) in the Framingham Heart Study Offspring cohor
162 ns of genes shared identical by descent by a sib pair, in terms of the generalized lambda's for sib p
164 d no evidence of linkage, among 201 affected sib pairs, in the region of chromosome 2 that contains t
166 -Elston method was developed for independent sib pairs; its generalization to nonindependent sib pair
168 ir, in terms of the generalized lambda's for sib pairs (lambda S), parent-offspring pairs (lambda O),
169 itional previous population of 66 BMI >or=35 sib-pairs led to a significant LOD score of 3.8 at the 1
172 w, freely available computer program, Splat (Sib Pair Linkage Analysis Testing), that can perform any
173 A genome-wide scan (GWS) using affected sib pair linkage analysis was performed on 218 sibling p
175 thwestern American Indian tribe, significant sib pair linkage of antisocial alcoholism to HTR1B G861C
176 ein, no evidence for linkage was observed by sib-pair linkage analyses (P values ranged from .24 to .
179 utistic siblings), we performed a multipoint sib-pair linkage analysis between autism and 35 microsat
180 he CETP promoter and used it in quantitative sib-pair linkage analysis in 119 female dizygotic (DZ) t
181 milies with NIDDM and conducted quantitative sib-pair linkage analysis with candidate loci for insuli
182 study over the standard genomewide affected-sib-pair linkage analysis, for a range of different unde
186 to simultaneously estimate, on the basis of sib-pair linkage data, both the position of a trait locu
187 ort, we have used a covariate-based affected-sib-pair linkage method to analyze the chromosome 21 cli
192 use three approaches: pedigree and affected sib-pair linkage studies and association studies of popu
194 een individuals has serious consequences for sib-pair linkage studies: false relationships bias the s
196 wo at OB, five at TUB, and three at ASP) for sib-pair linkage to BMI, percentage body fat, resting me
200 rametric linkage (NPL) analysis and affected sib pair (MAPMAKER/SIBS) nonparametric methods also show
205 (APP) region is strongly linked to affected sib pairs of the oldest current age (i.e., age either at
207 s screened with heterologous liver cDNA from sib-pairs of contrasting HDL-C phenotypes on two differe
208 2076 affected sib-pairs and 66 affected half-sib-pairs of the British Genetics of HyperTension study.
209 for example, allele sharing proportions for sib pairs or logarithm of odds (lod) scores in general s
213 ely to be ascertained than affected non-twin sib pairs (or 7 times more likely if "stoppage" plays a
214 atellite (in the total sample of informative sib-pairs p = 0.039, in selected sample of one or zero a
216 , the intraclass correlations (ICCs) between sib-pairs (pairs of unaffected siblings and schizophreni
217 airs, we assume that they are the same among sib pairs, parent-offspring pairs, and monozygotic twins
223 d volumetric magnetic resonance imaging in a sib pair "quad" design to study the family aggregation o
225 evere suicide attempts (P=.006 in unaffected sib pairs; regression: P=.01), alcoholism (P=.003 in una
226 on: P=.01), alcoholism (P=.003 in unaffected sib-pairs; regression: P=.02), and Karolinska Scales of
229 Sib-pair analysis based on a maximum of 258 sib pairs revealed suggestive linkages between the perce
230 e genes including nicotinic receptors in 200 sib pairs selected from the Mid-South Tobacco Family pop
231 linkage to suicidality (P=.006 in unaffected sib pairs), severe suicide attempts (P=.006 in unaffecte
232 he implicit assumption that randomly sampled sib pairs share half their alleles identical by descent
235 Designation of only GD cases as affected (74 sib pairs) showed a peak NPL score of 3.09 (P=.001).
236 kage Analysis Testing), that can perform any sib pair statistical test currently in use, as well as a
237 advocate the ASP/DSP design with appropriate sib-pair statistics that test the difference in allele s
239 e high proportion of twins found in affected-sib-pair studies can be adequately explained by the high
240 Using simulation, we have investigated, for sib-pair studies, the robustness of the likelihood-ratio
243 nome-wide linkage scan in the Irish Affected Sib Pair Study of Alcohol Dependence (IASPSAD) sample al
245 fer relationships typically encountered in a sib-pair study, as a function of marker allele frequenci
248 Here we show that the robustness of affected-sib-pair tests is related to the shape of the constraint
249 of magnitude more efficient than two common sib-pair tests of linkage; (2) extreme sampling results
250 utation frequencies were greater in affected sib pairs than in sporadic CD cases but actually decreas
251 dures for mapping quantitative-trait loci in sib pairs that allows a simultaneous test of allelic ass
254 xtremely discordant and extremely concordant sib pairs that were available in the sample is more powe
255 ing study was done in which an additional 19 sib pairs that were low concordant for circulating eosin
257 ains >10,000 relative pairs (including 1,249 sib pairs) that are useful for linkage analyses, we perf
258 to 364 ARM families with up to 329 affected sib pairs, the linkage signal on chromosome 9 vanished,
261 on available through genotyping 118 affected sib pairs, their parents and other affected family membe
262 ata, we identified in a sample of 961 female sib-pairs, three genome-wide significant QTLs for apolip
263 number of affected twin pairs among affected sib pairs to expected values in two separate samples of
266 onal "model-free" tests such as the affected sib-pair, transmission/disequilibrium, haplotype relativ
267 ocus to structure the space of observations, sib-pairs, triads, and singletons can be analyzed jointl
268 th the conditional analysis and the affected-sib-pair two-locus analysis provided further evidence fo
271 nt evidence for linkage among low concordant sib pairs was found for several markers in the region un
273 sociation in age of onset between members of sib pairs was observed when the analysis was performed u
276 ions of affected relatives (such as affected sib pairs); we call this "generalized single ascertainme
278 391 families, containing up to 452 affected sib pairs, we found linkage evidence in four regions: 1q
279 binations between HD and sexual phenotype in sib pairs, we predict, for the postulated HD gene, a mal
281 be considerably reduced by including extreme sib pairs when the parents also have similarly extreme v
282 We similarly classified our data set of 82 sib pairs with AutD, identifying 45 families with AutD a
283 Tabulation of allele sharing in affected sib pairs with D20S197 and D12S349 suggests that affecte
285 These two observations-sex concordance in sib pairs with HD and cosegregation of HD and LWD-impell
287 e analysis was followed by identification of sib pairs with linkage and construction of core shared h
288 we model locus heterogeneity among affected sib pairs with prostate cancer by including covariates i
291 ion to model the squared trait difference of sib pairs with the shared allele identical by descent (I
293 We performed exome sequencing on an affected sib-pair with normal ultrastructure in more than 85% of
295 int linkage methods were applied to affected sib-pairs with inflammatory bowel disease, and significa
296 nt marker densities and heterozygosities for sib pairs (with and without parental genotypes), sib tri
297 ave identified seven patients (including two sib pairs) with a predominantly late onset limb-girdle m
299 l on the trait data for a sample of affected sib pairs, with disease penetrances and disease-SNP hapl
300 Two-point linkage analysis using affected sib pairs yielded LOD scores of 3.15 at D12S1623 and 1.4
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