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1 pears to overcome inhibition mediated by the silencer.
2 in mice harboring point mutations in the Cd4 silencer.
3 s may similarly disrupt function of the ESS1 silencer.
4 e of Sir proteins and, in part, on the HMR-I silencer.
5 development and in DN cells lacking the CD4 silencer.
6 itment of histone acetyl transferases to the silencer.
7 by putatively disrupting an exonic splicing silencer.
8 on-sensitive and limited to the unmethylated silencer.
9 protein (hnRNP) A1-dependent exonic splicing silencer.
10 e element further supports its activity as a silencer.
11 riptional silencing on the Abf1p side of the silencer.
12 ting that it is the inherent property of the silencer.
13 ne c-MYC promoter region functions as a gene silencer.
14 novel functional components of the splicing silencer.
15 ypersensitivity (DHS) site located 3' to the silencer.
16 lement 1), can act as both an enhancer and a silencer.
17 s self-perpetuating independently of the Cd4 silencer.
18 as carriers for chemotherapy agents and gene silencers.
19 spread from these sites independently of the silencers.
20 the internal regions of HMR as well as with silencers.
21 ns were recombinationally separated from the silencers.
22 nteracted with Sir1 and recruits Sir1 to the silencers.
23 nhancers or create predicted exonic splicing silencers.
24 for ARS318 (HMR-I), which is one of the HMR silencers.
25 ents (REs) such as enhancers, repressors and silencers.
26 ons that contribute to the activities of the silencers.
27 gypsy LTR retrotransposon in P3 which act as silencers.
28 ency responders and Class II sRNAs acting as silencers.
29 pressive features that may act as long-range silencers.
30 d photocurrents three times those of earlier silencers.
32 e-dimensional structure of the exon splicing silencer 3 (ESS3) from HIV-1 has been determined using N
34 iption factor-binding site and abrogates the silencer activity in luciferase assays, an effect mimick
37 croRNA, including miR1, which exerted robust silencer activity over the induction of GATA-6 leading t
38 rotein CTCF to the target promoters, and the silencer activity requires the binding of the REST/NRSF
41 The identification of TRIM28 as a retroviral silencer adds to the growing body of evidence that many
42 ed silencing and interacted with core miRISC silencers Ago2 and Rck/p54 in an RNA-dependent manner an
43 We also discovered that, although the HMR-E silencer alone was sufficient to block transcription of
44 -kb silencer and the DHS, but not the 0.4-kb silencer alone, failed to maintain CD4 expression upon p
45 r, we found that in Saccharomyces cerevisiae silencers also influence the extent of silenced chromati
47 tive elongation factor b (P-TEFb) appose the silencer and enhancer in CD4-negative thymoma cells and
48 We previously identified a recombination silencer and heterochromatin targeting element in the Vk
50 kb sequence in intron 1 including the 0.4-kb silencer and the DHS, but not the 0.4-kb silencer alone,
51 e sites, the Sir proteins are recruited to a silencer and then associate with adjacent chromatin.
52 effects were also seen: Effective enhancers, silencers and 3' splice sites tend to be single stranded
53 osophila melanogaster, temperature-sensitive silencers and activators are widely used to control the
54 veloped an experimental strategy to identify silencers and EBs using transient transfection assays.
57 s been shown that Sum1-1p is directed to the silencers and internal regions of the HM loci, and inter
60 lished by the combined actions of cis-acting silencers and trans-acting proteins, including Sir2p, Si
61 ons had a higher ratio of splicing enhancers/silencers and were more conserved across mammals than th
62 ments (CREs, i.e., enhancers, promoters, and silencers) and the trans factors (e.g., transcription fa
64 Runx3 bind to the Ifng promoter and the Il4 silencer, and deletion of the silencer decreases the sen
65 suggest that the 5'ss D2, the proximal GGGG silencer, and the ESE act competitively to determine the
67 ng strong but spatially delimited binding to silencers, and weaker and more variable Ume6-dependent b
68 vely target CRF neurons with the optogenetic silencer archaerhodopsin tp009 (CRF-ArchT) to examine th
70 scopy to analyze the dynamic effects of four silencers associated with diverse modifications: DNA met
71 itial hnRNP A1 binding to an exonic splicing silencer at the 3' end of human immunodeficiency virus t
73 In S. cerevisiae, Sir1 is recruited to the silencers at HML and HMR via its ORC interacting region
74 er mapping in T. delbrueckii revealed single silencers at HML and HMR, bound by Td-Kos3, Td-Sir2, and
75 lent information regulator (Sir) proteins to silencers at the silent mating-type loci and to telomere
80 in detail the interaction between enhancers, silencers, boundary elements and promoters at individual
81 eage choice, whereby inactivation of the DRE silencer by a strong TCR signal leads to CD4 commitment,
85 t binding of Mi-2beta with Ikaros to the Cd4 silencer caused silencer inactivation, thereby allowing
86 regulators, including potential activators, silencers, chromatin remodelers, and ancillary factors.
87 ion and affinity purification to isolate the silencer complex assembled in vitro and identify the con
89 the optimal target was mapped to a splicing silencer containing two pseudoacceptor sites sandwiched
90 o promote silencing and found that the HMR-E silencer contributed to an increased steady-state associ
94 er and the Il4 silencer, and deletion of the silencer decreases the sensitivity of Il4 to repression
95 encers, it is possible that the promotion of silencer degradation by viral transactivators may be a c
99 sly, we reported that the neuron-restrictive silencer element (NRSE) of mu opioid receptor (MOR) func
100 gradient via a conserved Schnurri/Mad/Medea silencer element (SSE) unlike NEEs at brk, sog, rho, and
101 tic stem and progenitor cell (HSPC)-specific silencer element (the Gata1 methylation-determining regi
102 RSF DNA-binding sequence (neuron restrictive silencer element [NRSE]), in vitro and in vivo, reduced
103 and show that it contains a transcriptional silencer element acting on both the AWT1 and WT1-AS prom
104 (ASO) that blocks an SMN2 intronic splicing silencer element and efficiently promotes exon 7 inclusi
105 maining independent causal variant disrupt a silencer element and putatively increase ESR1 and RMND1
106 form a G-quadruplex structure that acts as a silencer element for c-MYC transcriptional control.
107 lation of Cx36 requires a neuron-restrictive silencer element in the Cx36 gene promoter, and the down
108 l analyses show that SNP rs2494737 maps to a silencer element located within AKT1, a member of the PI
112 tone 3'-UTR motif and the neuron-restrictive silencer element, as well as striking examples of novel
113 s by a separate RNA and that the replication silencer element, located within RIV, defines the templa
115 ed the inter-relationship between the UGCAUG silencer elements and the previously identified intronic
116 ure analyses to demonstrate that the two HMR silencer elements are in close proximity and functionall
117 functionally confirmed four enhancer and two silencer elements by performing luciferase reporter assa
119 xtaposition to one another, and enhancer and silencer elements operate over large distances to regula
120 pression module" and identified enhancer and silencer elements that are likely to be responsible for
121 n, by enabling distal regulatory enhancer or silencer elements to directly interact with proximal pro
122 cruits chromatin-modifying complexes to RE1 'silencer elements', which are associated with hundreds o
127 stent with the ties functioning as barriers, silencers, enhancers or locus control regions, depending
128 cis-regulatory elements, such as insulators, silencers, enhancers, and promoters, work together to ti
131 SF2 or to the creation of an exonic splicing silencer (ESS) element that functions by binding of the
132 st all of a diverse panel of exonic splicing silencer (ESS) elements alter splice site choice when pl
134 ic analysis revealed that an exonic splicing silencer (ESS) regulated caspase-9 pre-mRNA processing i
135 verts an exonic-splicing enhancer (ESE) to a silencer (ESS), causing frequent exon7 skipping in SMN2
136 splicing enhancers (ESE) and exonic splicing silencers (ESS) in human inherited disease is still poor
137 silencer (ISS), a bipartite exonic splicing silencer (ESS3a/b), and an exonic splicing enhancer (ESE
138 rength of several classes of exonic splicing silencers (ESSs) evolved in a correlated way, whereas sp
139 c splicing enhancers (ESEs), exonic splicing silencers (ESSs), intronic splicing enhancers (ISEs), an
140 uld be designated as enhancers (ESEseqs) and silencers (ESSseqs), with an ESRseq score indicating the
142 eanalyze Johnson et al.'s neuron-restrictive silencer factor (NRSF) ChIP-Seq data without relying on
143 transcriptional repressor neuron-restrictive silencer factor (NRSF), which negatively regulates Crh g
144 with the function of the neuron-restrictive silencer factor (NRSF/REST), an important transcription
145 ap in vivo binding of the neuron-restrictive silencer factor (NRSF; also known as REST, for repressor
148 cing Transcription Factor/Neuron-Restrictive Silencer Factor (REST/NRSF) is a gene-silencing factor t
149 cing transcription factor/neuron-restrictive silencer factor (REST/NRSF) silences neuronal genes in n
150 1-silencing transcription/neuron-restrictive silencer factor (REST/NRSF)--thought to regulate hundred
152 anscription factor (REST)/neuron-restrictive silencer factor is important in a broad range of disease
153 anscription factor]/NRSF (neuron-restrictive silencer factor) actively represses a large array of cod
154 TC-binding factor), NRSF (neuron-restrictive silencer factor) and STAT1 (signal transducer and activa
155 factor (REST; also called neuron restrictive silencer factor) binds to a core group of approximately
156 nscription (also known as neuron-restrictive silencer factor) to position 509 of the KCC2 promoter th
157 ctor (REST; also known as neuron-restrictive silencer factor, NRSF) is a universal feature of normal
163 P rs12038474 is located in a transcriptional silencer for CDC42 and the risk allele increases express
164 re-selection stage is independent of a known silencer for Thpok, and requires the last zinc-finger mo
165 In contrast, H-NS, a global transcriptional silencer, formed two compact clusters per chromosome, dr
167 of the HML-E silencer is more permissive to silencer function than that of HML-I or HMR-E, despite t
169 DNA sequence elements, such as enhancers and silencers, function to control the spatial and temporal
170 statistically significant enhancers and five silencers functional in either liver or astrocyte cells,
174 t al. (2014) determine that the chemogenetic silencer hM4Di-DREADD suppresses presynaptic glutamate r
175 transcription of the HMR locus, a secondary silencer, HMR-I, boosted the level of Sir proteins at HM
176 We compared the abilities of two different silencers, HMR-E and a telomeric repeat, to promote sile
178 ing enhancers and to disrupt exonic splicing silencers, implying positive selection for these splicin
179 ibition involved binding of pStat3 to a gene silencer in a second conserved enhancer region (enhancer
180 function as an enhancer in one tissue but a silencer in another tissue from the same intronic region
181 tively regulated through activity of the Cd4 silencer in CD4(-)CD8(-) double-negative (DN) thymocytes
183 sal, which revealed a continuous role of the silencer in mature CD8 cells while exposing a remarkable
185 rmore, TRIC-induced expression of a neuronal silencer in nutrient-activated cells enhanced stress res
187 otein-coupled receptor hM4D is a presynaptic silencer in the presence of its cognate ligand clozapine
188 biased experimental search for enhancers and silencers in a 153-kb region containing the human apolip
189 noncanonical nucleic acid structures, act as silencers in the promoter regions of human genes; putati
193 in 1 (SIRT1), a histone deacetylase and gene silencer, in the eutopic endometrium from women with end
194 2beta with Ikaros to the Cd4 silencer caused silencer inactivation, thereby allowing for CD4 expressi
197 of all CREs, including promoters, enhancers, silencers, insulators and transcription factor binding s
199 erent regulatory motifs including enhancers, silencers, insulators, barriers, and boundaries act simi
200 ncreased transcriptional repression, and the silencer is also shown to be an in vitro and in vivo tar
202 e positioning in the immediate vicinity of a silencer is independent of its orientation and genomic c
205 encing in CD8 cells, thus suggesting the Cd4 silencer is not the (only) determinant of heterochromati
206 oncogenic role of EZH2 as a transcriptional silencer is well established; however, additional functi
207 They ensure that the action of enhancers and silencers is restricted to the domain in which these reg
208 partite motif of the human intronic splicing silencer ISS-N1, which controls survival of motor neuron
210 Antisense treatment to SMN2 intron7-splicing silencer (ISS) improves SMN expression and motor functio
211 that ASOs directed against an intron splice silencer (ISS) in the survival motor neuron 2 (SMN2) gen
212 gh a complex network of an intronic splicing silencer (ISS), a bipartite exonic splicing silencer (ES
213 cing enhancers (ISEs), and intronic splicing silencers (ISSs), which are typically located near the s
214 exon 7 and identified two intronic splicing silencers (ISSs): one in intron 6 and a recently describ
215 1 also stimulate the degradation of cellular silencers, it is possible that the promotion of silencer
217 lso binds to an additional intronic splicing silencer, located at the 3' end of intron 10, to promote
219 50 nucleotides downstream of 3'ss A1; a GGGG silencer motif proximal to 5'ss D2; and an SRp75-depende
220 ucleotide that targets the intronic splicing silencer N1 (ISS-N1), located downstream of the 5' splic
222 neither the initiation of DNA replication at silencers nor the passage of a replication fork through
225 sion of negative JAK/STAT regulators such as silencer of cell signaling 1 (SOCS1) or protein-tyrosine
229 cteria, which functions as a transcriptional silencer of foreign DNA by binding to AT-rich elements,
234 er that resembles the binding motif for RE-1 silencer of transcription (REST; also known as NRSF) tra
235 histone deacetylase 2 (PfHda2), is a global silencer of virulence gene expression and controls the f
236 hnRNP H and hnRNP F proteins as being novel silencers of fibroblast growth factor receptor 2 exon II
240 dentified 456 putative splicing enhancers or silencers, of which 221 were predicted to be tissue-spec
241 development via transient action of the Cd4 silencer; once established, the heterochromatin becomes
242 en reported to function as a transcriptional silencer or activator and to execute these activities th
243 ders or in exonic or intronic RNA regulatory silencer or enhancer elements, as well as in genes that
244 plicing factors with regulatory sites termed silencers or enhancers, RNA-RNA base-pairing interaction
245 nance of epigenetic information in which DNA silencers or nascent RNA scaffolds act as sensors that w
248 an inducible proximal promoter, an upstream silencer (PAUSE-1), and a distal transactivator region b
250 e and potential intersection with epigenetic silencer polycomb repressive complex 2 (PRC2), suggested
253 ed to the telomeric repeat, even though both silencers recruited similar levels of Sir proteins.
254 ochondrial division inhibitor 1 or Drp1 gene silencer reduced mitochondrial fragmentation and increas
255 as2Delta reduces the silencing activities of silencers regardless of their locations and contexts, in
256 eam of the Vkappa genes was increased in the silencer regions upstream of Jkappa1, within the Igkappa
258 exemplifies this process, with enhancer- and silencer-regulated establishment of epigenetic memory fo
260 TRF2 interacts with the master neuronal gene-silencer repressor element 1-silencing transcription fac
261 also found that the neuronal transcriptional silencer REST is necessary for FBMN migration, and we pr
265 These data imply that xDnmt1 has a major silencer role in early Xenopus development before the MB
266 at silencing proteins are first recruited to silencer sequences and then spread from these sites inde
268 in silencing: recruitment of Sir proteins to silencers, Sir protein spreading, and transcriptional re
269 treatment of eyes with KA along with a Sarm1 silencer siRNA attenuated KA-mediated degeneration of RG
275 f decoy splice sites and a higher density of silencers than exons in which splice-site mutation activ
277 In CD4 cells, Runx1 dissociates from the silencer that has become less accessible, and CD4 transc
278 ors, but p300 recruitment is impaired by the silencer that is associated with the repressor Runx1.
279 ) are involved in the function of a splicing silencer that is created de novo by a total of 83 differ
280 e activation, but Runx1 remains bound to the silencer that retains an open chromatin configuration.
281 ion rely on the function of miRNA, molecular silencers that enact post-transcriptional gene silencing
283 e exonic and intronic splicing enhancers and silencers that regulate exon 13 inclusion via trans-acti
284 on of Sir-based silencing, focusing on Sir1, silencers, the molecular topography of silenced chromati
286 mic function: it activates the translational silencers TIA-1 and TIAR and thus inhibits the translati
287 nner, and could surprisingly replace the Cd4 silencer to induce irreversible Cd4 silencing in CD8 cel
288 histone deacetylase functions as a chromatin silencer to regulate recombination, genomic stability, a
291 nsitive Cd4 allele harboring a removable Cd4 silencer, we found that a tet-controlled repressor recap
292 on-coding RNA XIST functions as a cis-acting silencer when expressed from nine different locations th
293 Sir2p and Sir3p, but not Sir4p, to the HMR-E silencer, where silencing initiates, as well as the effi
295 und that H-NS functions as a transcriptional silencer while Ler functions as an antisilencer of LPF e
296 modified duplexes can be highly potent gene silencers, with EC50s in the picomolar concentration ran
297 centrated at and immediately adjacent to the silencers, with lower levels of enrichment over the prom
298 BZLF1 promoter, Zp, are potent transcription silencers within the context of an intact EBV genome.
299 erent combinations of splicing enhancers and silencers without assuming a predefined size or limiting
300 show that the tiRNA-associated translational silencer YB-1 contributes to angiogenin-, tiRNA-, and ox
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