ライフサイエンスコーパス: simple sequence repeat

1 inheriting an abnormally large unstable DNA simple sequence repeat.

2 can be attributed to induced instability of simple sequence repeats.

3 real-time PCR amplification of loci carrying simple sequence repeats.

4 of this region and subsequent generation of simple sequence repeats.

5 s revealed the presence of a total of 19,379 simple sequence repeats.

6 se substitutions and insertions/deletions in simple sequence repeats.

7 ome also contains a vast number (>12,000) of simple sequence repeats.

8 train MC58 revealed 65 genes associated with simple sequence repeats.

9 s chromosome ends by the synthesis of tandem simple-sequence repeats.

10 nternal RNA template to synthesize telomeric simple-sequence repeats.

11 he revelation that the variable expansion of simple sequence repeats accounted for anticipation spawn

12 ael over the last 28 y in flowering time and simple sequence repeat allelic turnover.

13 Polymorphic simple-sequence repeat analyses at 15 loci on chromosome

14 s (GDs) among parents were estimated with 44 simple sequence repeat and 2303 single-nucleotide polymo

15 Simple sequence repeat and single-nucleotide polymorphis

16 ns were identified and characterised via 131 simple sequence repeats and 1612 SNPs anchored to the ri

17 On all platforms, simple sequence repeats and genome redundancy tended to

18 arker type (single-nucleotide polymorphisms, simple sequence repeats and insertion/deletions) and loc

19 ve identified tracts of potentially unstable simple sequence repeats and their potential functional s

20 A paucity of long simple-sequence repeats and retroelements is consistent

21 A fingerprinting strategy based on genetic (simple sequence repeat) and geochemical (multielement an

22 putative MITEs, transposon-like elements, 5 simple sequence repeats, and low-copy-number DNAs of unk

23 ents (MITEs), remnants of DNA transposons, 4 simple sequence repeats, and low-copy-number DNAs of unk

24 equence tags, expressed sequence tag-derived simple sequence repeats, and repetitive sequences.

25 Telomerase supplements the tandem array of simple-sequence repeats at chromosome ends to compensate

26 ed hypervariable nuclear markers using inter-simple sequence repeat banding patterns to test these cl

27 protein is dedicated to synthesis of tandem, simple-sequence repeats by virtue of its specialization

28 We used chloroplast simple sequence repeats (cpSSRs) to examine whether ther

29 A simple sequence repeat (D4S391) with high heterozygosity

30 the C. ensifolium transcriptome to identify simple sequence repeats derived from gene regions (genic

31 significantly higher counts of (AG)n dimeric simple sequence repeats (Di-SSRs) in the genomes, coding

32 s used to study evolution of 22 dinucleotide simple sequence repeat (diSSR) sites whose upstream flan

33 To study evolution of dinucleotide simple sequence repeats (diSSRs) we searched recently av

34 Our results suggest that these simple sequence repeat DNA loci will be useful for ident

35 Affected sib pair studies using a simple sequence repeat DNA polymorphism physically linke

36 instances also identify a physically linked simple sequence repeat DNA polymorphism that can be used

37 al localization of >3,000 genetically mapped simple sequence repeat DNA polymorphisms.

38 works in Escherichia coli using hypermutable simple sequence repeats embedded in the spacer region of

39 uberosum ssp. tuberosum, containing mainly a simple sequence repeat encoding histidine and aspartate.

40 rived microsatellite (expressed-sequence tag simple-sequence repeat (EST-SSR)) primers to survey gene

41 , this framework can also be used for direct simple sequence repeats genotyping.

42 SSRs (simple sequence repeats) have been shown to have a varie

43 Here, we study the inheritance of cpDNA simple sequence repeats in 323 offspring derived from gr

44 Variation in simple sequence repeats in key genes can provide a mecha

45 strand DNA synthesis is known to destabilize simple sequence repeats in yeast and Escherichia coli.

46 Use of simple sequence repeats is advantageous because of the l

47 Localized hypermutation mediated by simple sequence repeats is an important mechanism of suc

48 mediated through variation in the length of simple sequence repeats, is recognized as an important m

49 , hence, the comparative assessment of Inter-simple sequence repeat (ISSR) and Start codon targeted (

50 DNA were obtained from single spores (Inter Simple Sequence Repeat (ISSR) fingerprints).

51 Furthermore, they implicate simple sequence repeats, linked to gene regulation and u

52 Simple sequence repeats located within reading frames me

53 We identified 83 simple sequence repeat loci that are polymorphic between

54 This study utilised 13 polymorphic simple sequence repeat loci to investigate the impact of

55 used molecular data from chloroplast DNA and simple sequence repeats loci of P. machrisii and P. auri

56 stry of salmonid fishes, was detected at one simple sequence repeat locus and suggested by the presen

57 to adapt a genotyping approach based on SSR (Simple Sequence Repeat) marker to a discriminating traci

58 of the 22 BC(5)F(1) were genotyped using 12 simple sequence repeat markers around the Pi-ta genomic

59 e progeny were screened with 115 polymorphic simple sequence repeat markers covering >90% of the mous

60 As simple sequence repeat markers derived from BESs have so

61 screened with forty-three highly polymorphic simple sequence repeat markers in PCR-based assays.

62 -pairs, for the haplotype generated from two simple sequence repeat markers within the LPL gene).

63 a whole-genome scan with highly polymorphic simple sequence repeat markers, a maximum LOD score of 3

64 Using simple sequence repeat markers, we developed a bacterial

65 t, separated by 10-42 species-specific inter-simple sequence repeat markers.

66 For maize chromosome 1, mapping 45 simple-sequence repeat markers delineated 10 groups of R

67 c variation was also found using ISSR (inter-simple sequence repeat) markers, and population structur

68 a also suggest that highly unstable expanded simple sequence repeats may act as sensitive reporters o

69 d develop PCR primers that permit the use of simple sequence repeats (microsatellites) to detect diff

70 We found 1,742 simple sequence repeat motifs in 1,585 BESs, spanning 27

71 Here we characterize natural variation in simple-sequence repeats of 2-10 bp from inbred Drosophil

72 c library was screened for clones containing simple sequence repeat, or microsatellite, loci.

73 population, we measured the copy numbers of simple sequence repeats, or microsatellites, in Mycobact

74 by this method with that measured by inter-(simple sequence repeat) PCR and microsatellite instabili

75 tes of fractional allelic loss and/or inter-(simple sequence repeat) PCR instability; these seven loc

76 genomes through use of the technique inter-(simple sequence repeat) PCR, we have found genomic alter

77 akly associated with that measured by inter-(simple sequence repeat) PCR.

78 identified, with a distribution of one SSR (simple sequence repeat) per 8.36 kbp and 2,000 were suit

79 We have identified a unique simple sequence repeat polymorphic marker (hLMX1.2CA1) i

80 A simple sequence repeat polymorphism (ipf1CA2) was identi

81 This simple sequence repeat polymorphism, and thus the IPF-1

82 We studied the extent to which genotyping of simple sequence repeat polymorphisms (SSRs) in pooled DN

83 dred thirty-six new STSs, including 10 novel simple sequence repeat polymorphisms that are being used

84 containing both gene-specific sequences and simple sequence repeat polymorphisms.

85 thod for high-throughput genetic analysis of simple sequence repeat polymorphisms.

86 strategies using both single-nucleotide and simple-sequence-repeat polymorphisms.

87 reveals numerous genes, genome-wide repeats, simple sequence repeats (potential genetic markers), and

88 riation mediated by changes in the length of simple sequence repeat regions within several genes, mos

89 typed, and while most used primers flanking simple sequence repeats, some genes were included.

90 ed wild species progenitors, with 50 nuclear simple sequence repeat (SSR) (also known as microsatelli

91 istic domestication-related QTL, we analyzed simple sequence repeat (SSR) diversity from 102 markers

92 ccurrence Locator (TROLL), is a light-weight Simple Sequence Repeat (SSR) finder based on a slight mo

93 al genetic structure than many forest trees (simple sequence repeat (SSR) FST=0.21), with major genet

94 A set of 47 simple sequence repeat (SSR) loci showed stronger eviden

95 (cotton) genomes, 780 cDNA, genomic DNA and simple sequence repeat (SSR) loci were re-sequenced in G

96 s estimated using a Bayesian analysis of 141 simple sequence repeat (SSR) loci.

97 ion of Chinese soybean landraces assessed by simple sequence repeat (SSR) markers and allelic variati

98 The map includes 14 simple sequence repeat (SSR) markers and four genes in a

99 Microsatellite or simple sequence repeat (SSR) markers have wide applicabi

100 A tiered marker analysis with 151 simple sequence repeat (SSR) markers in 90 individuals o

101 lar, we analysed 15 previously characterised Simple Sequence Repeat (SSR) markers to estimate genetic

102 I 491423] and CPP37 [PI 639033]), developing simple sequence repeat (SSR) markers, and identifying si

103 ereals for their potential use in developing simple sequence repeat (SSR) markers.

104 We have examined simple sequence repeat (SSR) polymorphisms and two singl

105 ia virginiana Mill., based on a whole-genome simple sequence repeat (SSR)-based genetic map and on ma

106 Simple sequence repeat (SSR)-based genetic markers are b

107 f the 112 gaps of 5-10 cM in the preexisting simple sequence repeat (SSR)-based map, while 111 genes

108 rations in expression of surface antigens by simple sequence repeat (SSR)-mediated phase variation.

109 Simple sequence repeats (SSR) from BESs were analyzed an

110 d to nine quantitative trait loci (QTLs) and simple sequence repeats (SSR) markers linked to three QT

111 ied fragment length polymorphisms (AFLP) and simple sequence repeats (SSR)] we have generated genetic

112 nd wild accessions that were genotyped at 25 simple-sequence repeat (SSR) loci.

113 re was estimated on the basis of 36 unlinked simple-sequence repeat (SSR) markers.

114 Microsatellite (simple sequence repeat - SSR) and single nucleotide poly

115 transposable elements and different types of simple sequence repeat (SSRs) (micro- and minisatellites

116 A total of 507 simple sequence repeats (SSRs or "microsatellites") were

117 sualize the geographic distribution of SNPs, simple sequence repeats (SSRs) and isozyme alleles and a

118 The marker systems evaluated were simple sequence repeats (SSRs) and single nucleotide pol

119 ived from repetitive DNA sequences including simple sequence repeats (SSRs) and TEs.

120 Simple sequence repeats (SSRs) are indel mutational hots

121 Simple Sequence Repeats (SSRs) are used to address a var

122 Accurate and efficient genotyping of simple sequence repeats (SSRs) constitutes the basis of

123 Simple sequence repeats (SSRs) have been successfully us

124 A combination of nuclear and chloroplast simple sequence repeats (SSRs) have been used to investi

125 Simple sequence repeats (SSRs) in DNA sequences are comp

126 Simple sequence repeats (SSRs) in DNA sequences are tand

127 the frequency and distribution of different simple sequence repeats (SSRs) in the genome.

128 Phase variation of hypermutable simple sequence repeats (SSRs) is a widespread and stoch

129 molecular analyses; in fact, by carrying out simple sequence repeats (SSRs) markers analysis, we char

130 mammal-like landscapes of retroelements and simple sequence repeats (SSRs) not found in the chicken.

131 We analyzed diversity at 462 simple sequence repeats (SSRs) or microsatellites spread

132 Poly(A/T) tracts are abundant simple sequence repeats (SSRs) within the human genome.

133 , 545 probed by random genomic clones, 16 by simple sequence repeats (SSRs), 14 by isozymes, and 5 by

134 However, in instances such as Simple Sequence Repeats (SSRs), a 'good enough' solution

135 inferences as the highly informative marker simple sequence repeats (SSRs), as long as a sufficient

136 Approximately 8.5% of BESs contain simple sequence repeats (SSRs), most of which are AT/TA

137 Simple sequence repeats (SSRs), sometimes described as g

138 ypermutation, through polymerase slippage of simple sequence repeats (SSRs), to generate phenotypic v

139 nature of selection using microsatellites or simple sequence repeats (SSRs).

140 an (AC)11 probe for the presence of (CA/GT)n simple sequence repeats (SSRs).

141 luding DNA transposons, retrotransposons and simple sequence repeats (SSRs).

142 ributions of transposable elements (TEs) and simple sequence repeats (SSRs).

143 s genome assembly 2.0 (JGI) were scanned for Simple Sequence Repeats (SSRs); unique SSRs were then te

144 Simple-sequence repeats (SSRs) have increasingly become

145 Simple sequence repeat telomeric DNA is maintained by a

146 Furthermore, we identified 179 candidate simple sequence repeats that can be used for genotyping

147 6.7 % of BESs contained simple sequence repeats, the most abundant (47.8 %) bein

148 s shown to be enriched on the 177- and 50-bp simple sequence repeats, the non-transcribed regions aro

149 tely 12% of all GSRs contain an identifiable simple-sequence repeat, the dataset is a powerful resour

150 clude one copia-like LTR retrotransposon, 13 simple sequence repeats, three copies of a novel type II

151 reverse transcriptase responsible for adding simple sequence repeats to chromosome 3'-ends.

152 a eukaryotic reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a

153 Telomerase adds simple sequence repeats to chromosome ends using an inte

154 The telomerase enzyme adds simple sequence repeats to chromosome ends.

155 Telomerase adds telomeric simple sequence repeats to single-stranded primers in vi

156 Telomerase adds simple-sequence repeats to chromosome ends to offset the

157 ect to phase variation due to alterations in simple sequence repeat tracts.

158 s derived from unique sequences flanking the simple sequence repeat units in seven clones showed all

159 Of these, 29 clones contained multiple simple sequence repeat units.

160 s (single nucleotide polymorphisms) and SSR (simple sequence repeat) variation as a means of tracing

161 In addition, 4,285 simple sequence repeats were detected.

162 nding domain; however, different patterns of Simple Sequence Repeats were found within a 540-bp regio

163 More than two million simple sequence repeats were identified, which will faci

164 ion of endogenous florendovirus loci with TA simple sequence repeats, which are associated with chrom

165 etailed genome-scale comparative analysis of simple sequence repeats within protein coding regions am