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2 nique ribonuclease activity that cleaves the single-stranded 3'-end from tRNAs that contain guanine d
6 but also reporter gene expression from both single-stranded and double-stranded (self-complementary)
8 between the empty and full capsids for both single-stranded and self-complementary AAV vectors indic
14 etermined the kinetics and thermodynamics of single-stranded break ligation by LIG3alpha and LIG3beta
15 umerically study the thermal conductivity of single-stranded carbon-chain polymers with multiple subs
17 obases at 37 degrees C from both double- and single-stranded circular template DNA using specific pri
19 e detected for the telomere repeat TTAGGG in single-stranded configuration, showing that secondary st
20 de experimental evidence that ComFA binds to single stranded DNA (ssDNA) and has ssDNA-dependent ATPa
21 ipment and facilitates the immobilization of single stranded DNA (ssDNA) probe sequences on a wide va
23 ed through pH-assisted thiol-gold bonding of single stranded DNA and salt aging, with preconjugated b
24 telomeric G-quadruplex DNA to complementary single stranded DNA and to telomere binding protein POT1
27 which is able to detect the hybridization of single stranded DNA probe with its complementary target
28 stranded MLPA products and subsequently to a single stranded DNA reporter probe bearing a HRP molecul
29 ch is able to detect hybridization of probe (single stranded DNA-ssDNA) and hybrid (double stranded D
30 s, as well as numerous circular Rep-encoding single-stranded DNA (CRESS DNA) viral genomes, were iden
31 mbination of alternating double-stranded and single-stranded DNA (dsDNA and ssDNA) regions of varying
33 ich forms helical nucleoprotein filaments on single-stranded DNA (ssDNA) and catalyzes strand invasio
34 ate-free synthesis of high-molecular-weight, single-stranded DNA (ssDNA) and demonstrate that it proc
35 nnealase, a protein that binds complementary single-stranded DNA (ssDNA) and facilitates its annealin
36 A orchestrates these processes by binding to single-stranded DNA (ssDNA) and interacting with several
45 through the cell cytoplasm, and deliver the single-stranded DNA (ssDNA) genome to the nucleus, where
48 epsilon has greater contact with the nascent single-stranded DNA (ssDNA) of the leading strand on act
49 nerated DSB ends are processed to yield long single-stranded DNA (ssDNA) overhangs, which are quickly
50 her hand, BLM and RECQ5 demonstrated similar single-stranded DNA (ssDNA) reeling activities that were
51 te of cytosine deamination is much higher in single-stranded DNA (ssDNA) than in double-stranded DNA,
52 egy relies on the preferential adsorption of single-stranded DNA (ssDNA) to GO over aptamer-target co
54 tion and genomic substitution rates, RNA and single-stranded DNA (ssDNA) viruses may be important con
55 gle-stranded DNA binding protein (SSB) wraps single-stranded DNA (ssDNA) with high affinity to protec
56 (AFM) to show that Ver preferentially binds single-stranded DNA (ssDNA) with no sequence specificity
57 ate containing RNA:DNA hybrids and displaced single-stranded DNA (ssDNA), has emerged as a major sour
58 on of the DNA damage signal, accumulation of single-stranded DNA (ssDNA), sensitivity to replication
59 or the detections of metal ion, dopamine and single-stranded DNA (ssDNA), with detection limits of 1.
60 sitive coactivator of transcription (PC4), a single-stranded DNA (ssDNA)-binding protein, as a novel
65 PF and ERCC-XPF and show that the binding to single-stranded DNA (ssDNA)/dsDNA junctions is dependent
66 rial strategies (1) , especially small lytic single-stranded DNA (the microviruses) and RNA phages (t
68 lyzed, radical reaction process that cleaves single-stranded DNA and requires only redox-inactive met
69 nzymes, dimerization enables processivity on single-stranded DNA and results in higher levels of muta
70 e and reveals new interactions between short single-stranded DNA and the vestibule of a biological po
71 exed, expanded proteomic technique that uses single-stranded DNA aptamers to assay 4783 human protein
75 Here the authors show that APOBEC3G binds single-stranded DNA as an active deaminase monomer, subs
77 nthetic sequence that mimics freshly unwound single-stranded DNA at replication fork showed that RPA
78 when recombinantly expressed had the general single-stranded DNA binding activity of RPA complexes, u
80 ralogous to the large subunit of the general single-stranded DNA binding heterotrimer replication pro
84 The nascent DNA colocalized with the VACV single-stranded DNA binding protein I3 in multiple punct
86 lymerase gamma holoenzyme, the mitochondrial single-stranded DNA binding protein mtSSB, the replicati
87 factor IIH prevented the accumulation of the single-stranded DNA binding protein replication protein
88 hairpin RNA (shRNA) screening, we identified single-stranded DNA binding protein replication protein
95 -CRISPR), a targeting strategy in which long single-stranded DNA donors are injected with pre-assembl
96 A double-strand breaks (DSBs) to generate 3'-single-stranded DNA facilitates DSB repair via error-fre
97 The separation and partitioning of large single-stranded DNA fragments of the homologous chromoso
98 We demonstrated that Brca2 protein prevents single-stranded DNA gap accumulation at replication fork
99 tions arise through the aberrant repair of a single-stranded DNA gap, in a process that is dependent
102 phosphate, and also for cytosine residues in single-stranded DNA generated from a phagemid, in which
103 determine how they contribute to duplex and single-stranded DNA handling, and test the cellular cons
104 ded binding proteins both protect and expose single-stranded DNA has important implications for our u
106 unequivocally establishes the existence of a single-stranded DNA incorporation pathway in human cells
108 ude that ROS contribute to TLD by converting single-stranded DNA lesions into double-stranded DNA bre
109 NA hybridized to the complementary DNA and a single-stranded DNA loop, are formed in switch regions o
111 pose that these contigs correspond to linear single-stranded DNA molecules that fold onto themselves
112 ate recombination (SPDIR), facilitates short single-stranded DNA molecules to invade and replace geno
113 olecule arrays by electrostatically adhering single-stranded DNA of gene-like length onto positively
114 ce receptor of interest is conjugated with a single-stranded DNA oligonucleotide, which hybridizes to
117 ins for Proteomics) is an approach that uses single-stranded DNA oligonucleotides to capture specific
118 and diffusion constants of several different single-stranded DNA oligonucleotides trapped in an MspA
120 fficient covalent immobilization of purified single-stranded DNA probe oligomers on cleaned gold micr
121 ine starvation leads to accumulation of both single-stranded DNA regions and intracellular ROS, and i
122 ivery of CRISPR/Cpf1 ribonucleoproteins with single-stranded DNA repair templates results in precise
123 nd resection, which generates long tracts of single-stranded DNA required for checkpoint activation a
127 gents, to prime second strand synthesis of a single-stranded DNA template and generate millions of pa
129 D/APOBEC family enzymes convert cytosines in single-stranded DNA to uracils, causing base substitutio
130 In the case of the ubiquitous human circular single-stranded DNA virus family Anelloviridae, there is
134 ore, the measurements of thermally denatured single-stranded DNA were carried out and the value of (G
136 eir destinations allows for a simple robot a single-stranded DNA with one leg and two foot domains fo
137 reaction (PER) cascades, which grow nascent single-stranded DNA with user-specified sequences follow
138 tional R-loops (RNA/DNA duplex and displaced single-stranded DNA) and DNA double-strand breaks (DSBs)
139 on associated with increased accumulation of single-stranded DNA, a substrate of APOBEC3A, triggering
140 bustly with specific sequences of unmodified single-stranded DNA, and we have identified five tags th
141 an essential replisome component that binds single-stranded DNA, has a role in replication-coupled n
142 sequence, the proteinosome payload (dextran, single-stranded DNA, platinum nanoparticles) is traffick
143 ese mutants compared with wild type DnaC for single-stranded DNA, suggesting that the substitutions a
144 rminal ATPase of MCM is compact and contacts single-stranded DNA, via a set of pre-sensor 1 hairpins
145 uble-strand breaks creates long stretches of single-stranded DNA, which are rapidly bound by replicat
146 tides, called staple strands, to fold a long single-stranded DNA, which is called a scaffold strand,
147 for deaminating cytosine bases to uracil in single-stranded DNA, with characteristic sequence prefer
148 ethods, this amplification requires only the single-stranded DNA-binding protein gp32 from bacterioph
149 nal proteins, including the telomeric repeat single-stranded DNA-binding protein Teb1 and its heterot
152 d of telomeric sequence-specific double- and single-stranded DNA-binding proteins, Taz1 and Pot1, res
153 Here, we present a study of surfactant and single-stranded DNA-wrapped SWNTs suspended in aqueous s
165 1 (hFEN1) catalyzes the essential removal of single-stranded flaps arising at DNA junctions during re
166 delocalized phonon-like modes in DNA provide single-stranded "flexible hinges" to assist in loop form
167 processing nucleases, in order to close the single-stranded gap and terminate further resection.
169 ble-stranded DNA breaks (SSBs and DSBs), and single-stranded gaps can block progression of the DNA re
173 This method combines an ultra-sensitive single-stranded library construction with barcoding erro
174 cing System of Digitalized Barcode Encrypted Single-stranded Library from Extremely Low (quality and
175 tructures (duplex, hairpin, G-quadruplex and single-stranded), ligand types (ion, small organic molec
177 ate that introducing anti-GAA duplex RNAs or single-stranded locked nucleic acids into patient-derive
179 manufactured electrode array and exposed to single-stranded MLPA products and subsequently to a sing
180 tem is composed of two nanoconjugates: (1) a single-stranded morpholino oligonucleotide (MORF1) attac
183 signal (a hemi-methylated d(GATC) site or a single-stranded nick) and the replication error after th
184 avirales is composed of viruses that possess single-stranded, non-segmented negative-sense (NNS) RNA
185 spindle tuber viroid (PSTVd) is a circular, single-stranded, noncoding RNA plant pathogen that is a
187 semble of flexible polyelectrolytes, such as single-stranded nucleic acids (ssNAs), is complicated by
188 tic domain (CD2) alone is capable of binding single-stranded nucleic acids and is important for deami
190 to enable them to bind a variable number of single-stranded nucleotides depending on the salt and pr
191 a CRISPR plasmid expressing Cas9/gRNA and a single-stranded oligodeoxynucleotide HDR donor template
192 ization of FOXO protein via CRISPR-assisted, single-stranded oligodeoxynucleotide-mediated homology-d
194 urrent article, we demonstrate that RNAs and single-stranded oligonucleotide analogs, or xeno nucleic
196 onversion with either double-stranded DNA or single-stranded oligonucleotide donors by up to 5.6-fold
197 DNA logic gate circuits typically provide a single-stranded oligonucleotide output, limiting the abi
198 and internalization of highly polar anionic single stranded oligonucleotides into cells and tissues.
199 precision genome editing in plants that uses single-stranded oligonucleotides (ssODNs) to precisely a
208 ransduced by the double-stranded but not the single-stranded recombinant AAV2 vectors progressed thro
209 unds, and that motifs are found in a loop or single stranded region of the potential RNA secondary st
210 e many different aspects of RNA ranging from single stranded regions to discrete secondary or tertiar
212 expressed COL1A gene, and co-injected with a single-stranded repair template into porcine zygotes.
213 xygen species, NOX2 oxidase, is activated by single stranded RNA and DNA viruses in endocytic compart
214 or the replication of various positive-sense single stranded RNA viruses, which hijack this cellular
216 ssential host factor for many positive-sense single-stranded RNA (+RNA) viruses including human patho
217 important roles in inhibiting positive-sense single-stranded RNA (+ssRNA) viral infection, especially
218 Higher ratios of HCV double-stranded to single-stranded RNA (ssRNA) correlated positively with I
219 show that topological structures containing single-stranded RNA (ssRNA) free of strong base pairing
220 ata from a competition assay between SLA and single-stranded RNA (ssRNA) indicate that SLA competes w
221 ndicates that small phages, particularly the single-stranded RNA (ssRNA) leviviruses, have a previous
222 The recent discovery of the positive-sense single-stranded RNA (ssRNA) Orsay virus (OV) as a natura
223 ly for adenoviruses, which resembles that of single-stranded RNA (ssRNA) viruses but differs from the
224 h pump their genome into a preformed capsid, single-stranded RNA (ssRNA) viruses, such as bacteriopha
225 rified human PRC2 recognizes G > C,U >> A in single-stranded RNA and has a high affinity for folded g
227 tion motif, domains are the largest class of single-stranded RNA binding domains in the human proteom
230 the HIV-1 genome, which is in the form of a single-stranded RNA enclosed inside a capsid shell, must
233 the transcription of the relatively flexible single-stranded RNA into a more rigid filamentous struct
235 (CCMV) is capable of packaging both purified single-stranded RNA molecules of normal composition (com
236 se H activity that act in concert to convert single-stranded RNA of the viral genome to double-strand
238 A virus (IAV) genomes are composed of eight single-stranded RNA segments that are coated by viral nu
239 lex RNA regardless of the orientation of the single-stranded RNA tail, it preferred a 5' to 3' polari
240 e CRISPR RNA and can be programmed to cleave single-stranded RNA targets carrying complementary proto
241 MthRnl) catalyzes intramolecular ligation of single-stranded RNA to form a closed circular RNA via co
243 arainfluenza virus (PIV) is a negative-sense single-stranded RNA virus in the Paramyxoviridae family.
245 n is a common strategy among positive-sense, single-stranded RNA viruses for bypassing the host cell
247 stroviruses are nonenveloped, positive-sense single-stranded RNA viruses that cause gastrointestinal
248 a large family of enveloped, negative-sense, single-stranded RNA viruses with significant economic an
249 We found that during sickness behavior, single-stranded RNA viruses, double-stranded RNA ligands
263 of a uridine two nucleotides downstream in a single-stranded segment, which we rationalize structural
266 we report a method, which is dubbed SISSOR (single-stranded sequencing using microfluidic reactors),
267 sequence the three-dimensional structures of single stranded (ss) DNA required for aptamer applicatio
271 y critical roles in controlling infection of single-stranded (ss) DNA geminiviruses and ssRNA viroids
273 DNA replication forks generates stretches of single-stranded (ss) DNA on both strands that are expose
276 RAD51 first forms a presynaptic filament on single-stranded (ss) DNA, which catalyses pairing with h
278 for the first time, the interaction of long single-stranded (ss) RNAs with cognate homologous double
282 perimentally construct diverse multikilobase single-stranded structures, including a 10,000-nucleoti
283 mportant for the processing of DNA ends into single-stranded substrates for homologous recombination.
284 lization of CpG oligodeoxynucleotide 1826, a single-stranded synthetic DNA adjuvant, eliciting an enh
285 r, G4-T-oligo has similar cellular uptake as single-stranded T-oligo, as shown by FACS analysis.
289 piezophila Argonaute (MpAgo) protein cleaves single-stranded target sequences using 5'-hydroxylated g
290 cific proteins that bind as a heterodimer to single-stranded telomere DNA to prevent illicit DNA dama
292 c mutations in hPOT1 OB-fold fail to bind to single-stranded telomeric DNA, eliciting a DNA damage re
293 lted out into a transcription bubble and the single-stranded template DNA is delivered to the RNAP ac
294 leolytic resection of DNA ends to generate a single-stranded template for the recruitment of another
295 NAP-promoter open complex (RPo) containing a single-stranded transcription bubble, and selects a temp
296 NAP-promoter open complex (RPo) containing a single-stranded 'transcription bubble,' and selects a tr
299 Here, we created site-specifically modified single-stranded vectors for replication in primate (COS7
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