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1 sus and five clonal groups for M. abscesssus subsp. bolletii, with just one clone detected in two pat
2 essus subsp. bolletii (n = 24), M. abscessus subsp. abscessus (n = 6), Mycobacterium fortuitum (n = 3
3 MIC90 values for 81 isolates of M. abscessus subsp. abscessus and 12 isolates of M. abscessus subsp.
4 esence of two clonal groups for M. abscessus subsp. abscessus and five clonal groups for M. abscesssu
5 susceptibility breakpoints for M. abscessus subsp. abscessus be changed from </=2 to </=4 mug/ml and
7 . massiliense and 15% to 20% of M. abscessus subsp. abscessus isolates renders these species intrinsi
8 lated U.S. and Western European M. abscessus subsp. abscessus isolates that are genetically distinct
9 Sequencing of the erm gene of M. abscessus subsp. abscessus will predict inducible macrolide suscep
11 and a nonfunctional erm gene in M. abscessus subsp. massiliense and 15% to 20% of M. abscessus subsp.
12 scessus subsp. abscessus and 13 M. abscessus subsp. massiliense isolates identified by whole-genome s
13 p. abscessus and 12 isolates of M. abscessus subsp. massiliense were 8 mug/ml and 4 mug/ml, respectiv
14 rately identified 41 Mycobacterium abscessus subsp. abscessus and 13 M. abscessus subsp. massiliense
15 rolide resistance in Mycobacterium abscessus subsp. abscessus, calling into question the usefulness o
16 cies identified were Mycobacterium abscessus subsp. bolletii (n = 24), M. abscessus subsp. abscessus
18 died the natural hybrid (Fragaria x ananassa subsp. cuneifolia) between two sexually dimorphic octopl
19 ubsp. tularensis (subtypes A.I and A.II) and subsp. holarctica (type B) strains from F. tularensis su
21 Mycoplasma mycoides subsp. capri (Mmc) and subsp. mycoides (Mmm) are important ruminant pathogens w
22 cebo (placebo group, n = 365) or B. animalis subsp. lactis at a dose of 10(9) colony-forming units/d
23 oides ovatus was out-competed by B. animalis subsp. lactis Bl-04 in mixed cultures growing on raffino
24 this study show that the use of B. animalis subsp. lactis failed to prevent nosocomial infections in
26 iet), and probiotic, Bfidobacterium animalis subsp. lactis (Bb12) (final dose verified at 10(5) colon
27 cillus acidophilus, Bifidobacterium animalis subsp lactis, Faecalibacterium prausnitzii, Bacteroides
28 The FMPP contained Bifidobacterium animalis subsp Lactis, Streptococcus thermophiles, Lactobacillus
29 pensions containing Bifidobacterium animalis subsp. lactis (B. lactis) HN019 was topically administer
30 asei 01); QB - with Bifidobacterium animalis subsp. lactis (BB 12); and QC, co-culture with the three
32 s acidophilus LA-5, Bifidobacterium animalis subsp. lactis BB-12 and Propionibacterium jensenii 702.
33 from the probiotic Bifidobacterium animalis subsp. lactis Bl-04 binds alpha-(1,6)-linked glucosides
34 t supplemented with Bifidobacterium animalis subsp. lactis DN-173010 versus a placebo yogurt, followe
35 were produced using Bifidobacterium animalis subsp. lactis HN019 in co-culture with Streptococcus the
36 stigate the role of Bifidobacterium animalis subsp. lactis in preventing nosocomial infections in the
37 two fully sequenced Bifidobacterium animalis subsp. lactis strains, BL-04 and DSM 10140, to hydrogen
38 ial virulence in vivo, since fewer S. aureus subsp. aureus NCTC8325-4 DeltasdrD bacteria than bacteri
40 ethicillin-susceptible Staphylococcus aureus subsp. aureus in a patient who was concomitantly coloniz
41 : a fruit blotch bacterium Acidovorax avenae subsp. citrulli (Aac), chilli vein-banding mottle virus
42 ial fruit blotch bacterium Acidovorax avenae subsp. citrulli (Aac), Chilli veinal mottle virus (ChiVM
44 ommon (n = 238, 92.6%), followed by M. avium subsp. avium serotype 1 (n = 12, 4.7%) and serotype 2, 3
45 minissuis; the bird type, including M. avium subsp. avium serotype 1 and serotype 2, 3 (also M. avium
46 hich have been shown to induce anti-M. avium subsp. hominissuis activity when added to THP-1 cells in
48 itates an improved understanding of M. avium subsp. hominissuis and how it establishes infection.
49 gocytes cocultured with established M. avium subsp. hominissuis biofilm and surveyed various aspects
50 Our data collectively indicate that M. avium subsp. hominissuis biofilm induces TNF-alpha-driven hype
52 ay determined that contact with the M. avium subsp. hominissuis biofilm led to early, widespread onse
54 nitial colonization of the airways, M. avium subsp. hominissuis forms microaggregates composed of 3 t
56 mmune serum significantly inhibited M. avium subsp. hominissuis infection throughout the respiratory
60 a pathogenic mechanism utilized by M. avium subsp. hominissuis to bind and invade the host respirato
66 e types: the human or porcine type, M. avium subsp. hominissuis; the bird type, including M. avium su
69 itoring cellular markers, only live M. avium subsp. paratuberculosis bacilli were able to prevent pha
72 ted in a greater recovery of viable M. avium subsp. paratuberculosis cells from milk than from sample
73 nt decreased the recovery of viable M. avium subsp. paratuberculosis cells more than treatment with N
75 d with transcriptional responses of M. avium subsp. paratuberculosis during macrophage infection.
76 hree evaluated for the isolation of M. avium subsp. paratuberculosis from milk, as it achieved the lo
77 the transcriptional level, over 300 M. avium subsp. paratuberculosis genes were significantly and dif
81 in the pathogenesis and immunity of M. avium subsp. paratuberculosis infection, a potential role that
88 To improve our understanding of M. avium subsp. paratuberculosis pathogenesis, we examined phagos
89 cipher the role of sigma factors in M. avium subsp. paratuberculosis pathogenesis, we targeted a key
91 that was shown to be important for M. avium subsp. paratuberculosis survival inside gamma interferon
92 edding cows are truly infected with M. avium subsp. paratuberculosis than are passively shedding M. a
93 crophage recruitment in response to M. avium subsp. paratuberculosis using a MAC-T bovine macrophage
94 sted a substantial role for sigL in M. avium subsp. paratuberculosis virulence, as indicated by the s
97 f the cell communication pathway by M. avium subsp. paratuberculosis, which loosens the integrity of
98 d whether it is possible that these M. avium subsp. paratuberculosis-infected animals could have been
106 serotype 1 and serotype 2, 3 (also M. avium subsp. silvaticum); and the ruminant type, M. avium subs
108 disease (JD), caused by Mycobacterium avium subsp paratuberculosis (MAP), occurs worldwide as chroni
112 A, Ag85B, and Ag85C from Mycobacterium avium subsp. paratuberculosis (MAP) (K(D) values were determin
113 zed for the isolation of Mycobacterium avium subsp. paratuberculosis (MAP) from milk and colostrum, w
114 le diagnostic assays for Mycobacterium avium subsp. paratuberculosis (MAP) have poor sensitivities an
115 sms of host responses to Mycobacterium avium subsp. paratuberculosis (MAP) infection during the early
116 m kansasii (n = 10), and Mycobacterium avium subsp. paratuberculosis (n = 10), cases exposed to M. bo
119 The infection biology of Mycobacterium avium subsp. paratuberculosis has recently crystallized, with
120 s between epithelium and Mycobacterium avium subsp. paratuberculosis have not been intensively studie
122 e genetic relatedness of Mycobacterium avium subsp. paratuberculosis isolates harvested from bovine f
123 hat were low shedders of Mycobacterium avium subsp. paratuberculosis were passively shedding or truly
125 GALV infection in the Indonesian M. burtoni subsp. was consistent with the susceptibility of the spe
127 DNA and bacterial culture from M. capricolum subsp. capripneumoniae strain ILRI181, while no amplific
128 a specific target sequence in M. capricolum subsp. capripneumoniae, as found in the genome sequence
130 subsp. capri (Mmc) and Mycoplasma capricolum subsp. capricolum (Mcap), and the main factors driving t
131 ious disease caused by Mycoplasma capricolum subsp. capripneumoniae that affects goats in Africa and
132 (AAO) on vitamin C in carrots (Daucus carota subsp. sativus), namely Nantes, Egmont Gold and baby car
136 nonhost resistance against Xanthomonas citri subsp. citri (Xcc) and Pseudomonas syringae pv. phaseoli
137 omology with the avrBs2 of Xanthomonas citri subsp. citri (Xcc), the causal agent of citrus canker di
138 isease, which is caused by Xanthomonas citri subsp. citri, is one of the most devastating diseases of
139 -like (TAL) effectors from Xanthomonas citri subsp. malvacearum (Xcm) are essential for bacterial bli
140 ocky Mountain lodgepole pine (Pinus contorta subsp. latifolia), a conifer that dominates millions of
143 ude, pre-hydrolysis of BLG by L. delbrueckii subsp. bulgaricus CRL 454 has a positive effect on BLG d
144 Pre-hydrolysis of BLG by L. delbrueckii subsp. bulgaricus CRL 454 increases digestion of BLG ass
145 ive of the group b Lactobacillus delbrueckii subsp. bulgaricus (Ldb)-infecting bacteriophages, was sh
146 he contribution of Lactobacillus delbrueckii subsp. bulgaricus CRL 454 to BLG digestion and to analys
149 S. enterica subsp. salamae, and S. enterica subsp. arizonae share features of the infection strategy
150 n 3588/07 against the genomes of S. enterica subsp. enterica serovar Typhimurium strain LT2 and Salmo
154 ng (e.g., avrA, sopB, and sseL), S. enterica subsp. salamae invades HeLa cells and contains homologue
155 se results show that S. bongori, S. enterica subsp. salamae, and S. enterica subsp. arizonae share fe
156 d EspJ homologues in S. bongori, S. enterica subsp. salamae, and Salmonella enterica subsp. arizonae
157 rica subsp. salamae, and Salmonella enterica subsp. arizonae The beta-lactamase TEM-1 reporter system
158 h a nuclease domain from Salmonella enterica subsp. arizonae This modified V. cholerae strain was abl
161 We report here that Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) use
162 posable immunosensor for Salmonella enterica subsp. enterica serovar Typhimurium LT2 (S) detection us
163 taphylococcus aureus and Salmonella enterica subsp. enterica serovar Typhimurium, were exposed to 25
164 draft genome assembly of Salmonella enterica subsp. salamae strain 3588/07 against the genomes of S.
165 differences between Yersinia enterocolitica subsp. enterocolitica and Yersinia enterocolitica subsp.
167 resistance profiles of 38 Streptococcus equi subsp. zooepidemicus isolates were determined from a ken
168 rent bacteremia caused by Streptococcus equi subsp. zooepidemicus, likely transmitted from mother to
170 ntical to that of pXFAS01 from X. fastidiosa subsp. fastidiosa strain M23; the two plasmids vary at o
171 d plasmid (pXF51) sequences of X. fastidiosa subsp. pauca strain 9a5c and more distant similarity to
172 ent in the Riv5 strain of Xylella fastidiosa subsp. multiplex isolated from ornamental plum in southe
173 three of the phenotypically defined C. fetus subsp. fetus strains to C. fetus subsp. venerealis strai
174 ed C. fetus subsp. fetus strains to C. fetus subsp. venerealis strains, when considering the core gen
175 extracts of Propionibacterium freudenreichii subsp. shermanii and after immunoaffinity purification i
176 t to longitudinally document S. gallolyticus subsp. pasteurianus as a cause of meningitis in four epi
179 een bacteremia by Streptococcus gallolyticus subsp. gallolyticus (SGG) and colorectal neoplasia (CRN)
180 Colonization by Streptococcus gallolyticus subsp. gallolyticus (SGG) is strongly associated with th
183 ven its similarity to free-living S. griseus subsp. griseus NBRC13350, comparative genomics will eluc
185 human isolates and Streptococcus halichoeri subsp. halichoeri is proposed for the gray seal isolates
186 a novel subspecies, Streptococcus halichoeri subsp. hominis, is proposed for the human isolates and S
187 nominations S. pseudoporcinus subsp. hominis subsp. nov. for the human isolates and S. pseudoporcinus
188 ) isolated from Mentha longifolia (L.) Huds. subsp. longifolia by using Ames Salmonella test (TA 1535
189 y matched the 16S rRNA of C. hyointestinalis subsp. lawsonii (56%), C. troglodytis (33%), C. upsalien
190 vided into four distinct clusters, including subsp. animalis, nucleatum, polymorphum, and fusiforme/v
192 llus cereus ATCC 10987, Campylobacter jejuni subsp. jejuni 81-176 and C. jejuni NCTC 11168, all of wh
193 PDB:3KZT], Cj0202c from Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) [PDB:3K7C
194 ctococcus lactis subsp. lactis and L. lactis subsp. cremoris (R704); QLA - with Lactobacillus acidoph
196 of two starter strains of Lactococcus lactis subsp. cremoris (strains from the Culture Collection of
197 o inhibited by 50% CFS of Lactococcus lactis subsp. lactis and 25% CFS of Leuconostoc lactis. subsp.
198 ulture Start, composed by Lactococcus lactis subsp. lactis and L. lactis subsp. cremoris (R704); QLA
200 utanol were identified in Lactococcus lactis subsp. lactis and Lactococcus cremoris subsp. cremoris.
202 Recombinant HPP from Lactococcus lactis subsp. lactis that was expressed in Escherichia coli con
203 Listeria monocytogenes, following Lc. lactis subsp. lactis and Leuconostoc mesenteroides subsp. cremo
205 of 50% CFS of S. thermophilus and Lc. lactis subsp. lactis were more than 70% by Staphylococcus aureu
209 he phenolic composition of B. forficata Link subsp. pruinosa (Vogel) Fortunato & Wunderlin is describ
210 s of B. forficata Link and B. forficata Link subsp. pruinosa (Vogel) Fortunato & Wunderlin, being kae
211 nfant-gut isolates of Bifidobacterium longum subsp. infantis and Bifidobacterium bifidum using indivi
213 by two subspecies of Bifidobacterium longum: subsp. infantis (B. infantis) and subsp. longum (B. long
214 etic diversity in natural Arabidopsis lyrata subsp. petraea populations that differ in demographic hi
215 ified, which corresponded to 32 A. marginale subsp. centrale genotypes detected in cattle, buffalo, a
216 ts indicated high occurrence of A. marginale subsp. centrale infections, ranging from 25 to 100% in n
218 ults demonstrate a diversity of A. marginale subsp. centrale strains from cattle and wildlife hosts f
220 interest in the epidemiology of A. marginale subsp. centrale, and, as a result, there are few reports
223 . cremoris (20%) whilst 25% CFS of Leu. mes. subsp. cremoris and Lc. lactis subsp. lactis showed stim
224 subsp. lactis and Leuconostoc mesenteroides subsp. cremoris (20%) whilst 25% CFS of Leu. mes. subsp.
225 ccum subsp. monococcum (T.m.), T. monococcum subsp. boeoticum (T.b.) and Triticum urartu (T.u.) were
226 s of 53 accessions among Triticum monococcum subsp. monococcum (T.m.), T. monococcum subsp. boeoticum
227 roteome profiling to compare the M. mycoides subsp. capri wild type with a mutant lacking the proteol
228 brane lipoprotein Q (LppQ-N') of M. mycoides subsp. mycoides as the major antigen and a possible viru
229 ltered phenotypes reminiscent of M. mycoides subsp. mycoides SC and had significant impacts on the pr
230 quences of the pathogenic strain M. mycoides subsp. mycoides SC Gladysdale and a close phylogenetic r
232 losely related bacteria, Mycoplasma mycoides subsp. capri (Mmc) and Mycoplasma capricolum subsp. capr
237 itudes utilises oilseed rape (Brassica napus subsp. oleifera) and turnip rape (B. rapa subsp. oleifer
239 authier, CDC2, and Samoa D), one T. pallidum subsp. endemicum isolate (Iraq B), the unclassified Frib
240 T. pallidum subsp. pertenue, and T. pallidum subsp. endemicum), Treponema paraluiscuniculi, and the u
241 rK expression sites, among eight T. pallidum subsp. pallidum isolates (Nichols Gen, Nichols Sea, Chic
243 e Treponema pallidum subspecies (T. pallidum subsp. pallidum, T. pallidum subsp. pertenue, and T. pal
244 reet14, UW104, and UW126), three T. pallidum subsp. pertenue isolates (Gauthier, CDC2, and Samoa D),
245 es (T. pallidum subsp. pallidum, T. pallidum subsp. pertenue, and T. pallidum subsp. endemicum), Trep
246 ce of ulcers negative for Treponema pallidum subsp pertenue on PCR, and active yaws was defined as ul
247 ction, which is caused by Treponema pallidum subsp. pallidum (TPA), has been re-emerging globally in
250 -exposed proteins, and in Treponema pallidum subsp. pallidum, the syphilis agent, it was reported to
251 NA sequencing to identify Treponema pallidum subsp. pertenue-specific sequences in a patient with act
254 s (LA-5); QLP - with Lactobacillus paracasei subsp. paracasei (L. casei 01); QB - with Bifidobacteriu
255 the probiotic strain Lactobacillus paracasei subsp. paracasei, L. casei 431 (Chr. Hansen A/S) (hereaf
257 and polar extracts of Lavandula pedunculata subsp. lusitanica (Chaytor) Franco collected in south Po
258 sp. pneumophila, 3 strains of L. pneumophila subsp. fraseri or L. pneumophila subsp. pascullei, 4 str
259 pneumophila subsp. fraseri or L. pneumophila subsp. pascullei, 4 strains of "L. donaldsonii," 3 strai
260 or subspecies: 15 strains of L. pneumophila subsp. pneumophila, 3 strains of L. pneumophila subsp. f
261 e subspecies denominations S. pseudoporcinus subsp. hominis subsp. nov. for the human isolates and S.
264 ished in the fine fescue grass Festuca rubra subsp. rubra (strong creeping red fescue) infected with
265 explain the genetic structure of P. sativum subsp. elatius in its westward expansion from its center
266 cies, while the diversity of wild P. sativum subsp. elatius was structured into 5 partly geographical
267 roasted) wattle, Acacia saligna subspecies (subsp.) saligna, pruinescens, stolonifera and lindleyi,
268 it shares more orthologues with B. subtilis subsp. subtilis NCIB 3610(T) (ANIm values, 85.4-86.7%) t
269 from the leaves of the plant Acer tataricum subsp. ginnala that has been consumed in some regions of
270 illus thuringiensis such as B. thuringiensis subsp. israelensis (ONR-60A) and B. thuringiensis subsp.
271 ein coded for by pBtoxis of B. thuringiensis subsp. israelensis, the plasmid that encodes all endotox
272 Bt152 gene is expressed in B. thuringiensis subsp. israelensis, we disrupted its function and showed
273 . israelensis (ONR-60A) and B. thuringiensis subsp. morrisoni (PG-14) pathogenic for mosquito larvae
274 squitocidal bacteria, Bacillus thuringiensis subsp. israelensis (Bti) and Lysinibacillus sphaericus (
275 t challenge with two different F. tularensis subsp. holarctica (type B) live vaccine strains, thereby
277 ibuting to the survival of the F. tularensis subsp. holarctica live vaccine strain (LVS) in macrophag
279 larctica (type B) strains from F. tularensis subsp. novicida and other near neighbors, including Fran
280 sistent with this function, an F. tularensis subsp. novicida trpB mutant is unable to grow in defined
281 distinguish the more virulent F. tularensis subsp. tularensis (subtypes A.I and A.II) and subsp. hol
282 aerobe Francisella tularensis: F. tularensis subsp. tularensis (type A) and F. tularensis subsp. hola
284 vicida and the highly virulent F. tularensis subsp. tularensis Schu S4 strain are able to secrete and
287 s spectrometry on the Francisella tularensis subsp. holarctica LVS defined three protein biomarkers t
289 we demonstrated that Francisella tularensis subsp. novicida, for which a complete two-allele transpo
290 m the highly virulent Francisella tularensis subsp. tularensis (type A) strain Schu S4 in hypervesicu
291 gia ATCC 25015 and on Francisella tularensis subsp. tularensis CCUG 2112, the most virulent Francisel
293 pies of iglE rendered Francisella tularensis subsp. tularensis Schu S4 avirulent and incapable of int
295 d characterization of Francisella tularensis subsp. tularensis strain Schu S4 mutants that lack funct
297 her with chlorogenic acid, and V. uliginosum subsp. gaultherioides dominated by malvidin derivatives
299 two magnitude orders higher in V. uliginosum subsp. gaultherioides than in V. myrtillus berries.
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