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1 iling, revealing an additional mechanism for tiling.
2 et protocol and efficient server-based image tiling.
3 long-standing theoretical studies on random tiling.
4 pidermal cells and in dendrite branching and tiling.
5 embles into a two-dimensional rhombus random tiling.
6 ates self-avoidance, whereas Dscam2 mediates tiling.
7 rtening of filopodia, and errors in cellular tiling.
8 be described via an icosahedrally symmetric tiling.
9 t DSCAM functions in both self-avoidance and tiling.
10 eyond the complexity observed in Archimedean tiling.
11 tic territories that show little overlap, or tiling.
12 estriction of terminals to single columns as tiling.
13 rystalline structure mapped upon the Penrose tiling.
14 ontact-mediated dendritic self-avoidance and tiling.
15 fficulties with the replication of spherical tiling.
16 baxonal domain-a phenomenon we term synaptic tiling.
17 ne protein Turtle, a key regulator of axonal tiling.
22 y to instead capture candidate CREs, thereby tiling across the targeted regions and markedly increasi
25 We analyse the geometry of the experimental tiling and discuss factors relevant for the stabilizatio
27 n serotonergic neurons disrupts local axonal tiling and global assembly of serotonergic circuitries a
29 trate a framework for programming random DNA tilings and show how to control the properties of global
32 nd cessation of growth, territory formation, tiling, and self-avoidance requires a quantitative compa
34 ur results show that the high-resolution ASO-tiling approach can identify cis-elements that modulate
38 matin immunoprecipitation followed by genome tiling array analysis (ChIP-chip) as the preferred appro
41 ay donkey (Equus asinus) using a whole-exome tiling array and the array comparative genomic hybridiza
44 al. use chromatin immunoprecipitation (ChIP) tiling array assays (ChIP-chip) to show that physical in
45 rformed chromatin immunoprecipitation (ChIP) tiling array assays (ChIP-chip) with a number of circadi
48 predicted gene models, ESTs and whole-genome tiling array data representing several developmental sta
52 We report on chromatin immunoprecipitation-tiling array experiments to globally map binding sites f
55 of plant centromeres, we developed a genomic tiling array for four fully sequenced rice (Oryza sativa
56 matin immunoprecipitation followed by genome tiling array hybridization (ChIP-chip) is a powerful app
57 ith high-throughput sequencing (ChIP-seq) or tiling array hybridization (ChIP-chip) is increasingly u
60 chip data sets collected on widely different tiling array platforms for two different organisms (Sacc
61 we conducted the first objective analysis of tiling array platforms, amplification procedures, and si
66 lling the false positive rate in genome-wide tiling array studies is very important, because the numb
72 Through the use of a high-density genomic tiling array, we generated DNA and histone methylation p
74 nd, we designed and implemented a customized tiling array, which enabled genome-wide, strand-specific
80 th methods, hybridized them independently to tiling arrays (1% genome) and compared the data to have
81 immunoprecipitation coupled with Arabidopsis tiling arrays (ChIP-chip) and gene expression studies, w
82 immunoprecipitation in conjunction with DNA tiling arrays (ChIP-chip) revealed that genomic occupanc
83 tion (ChIP) and high-resolution whole-genome tiling arrays (ChIP-chip) that Nhp6A is localized to spe
85 ults in both a spike-in experiment on ENCODE tiling arrays and an estrogen receptor ChIP-chip experim
87 led with recent developments in whole-genome tiling arrays and high-throughput next-generation sequen
88 by comparative hybridization to whole-genome tiling arrays and microarray-assisted bulk segregant ana
90 with an original array design strategy using tiling arrays and statistical procedures that average in
92 he genome using high-density oligonucleotide tiling arrays and then extended the TimEX method genome-
93 sing a ChIP-chip approach and the Affymetrix tiling arrays for Arabidopsis thaliana and found that ap
95 omatin immunoprecipitation coupled with KSHV tiling arrays identified the recruitment sites of the co
98 precipitation assays applied to human genome tiling arrays in conjunction with RNA microarray reveale
99 g a spike-in experiment on Affymetrix ENCODE tiling arrays in the presence of simulated blobs coverin
100 sing anti-O-GlcNAc ChIP-on-chip whole-genome tiling arrays on wild-type and mutant strains, we detect
101 omatin immunoprecipitation combined with DNA tiling arrays or high-throughput sequencing (ChIP-chip a
103 sequencing technologies and high-resolution tiling arrays provide an unprecedented opportunity to co
104 opy number changes of loci genome-wide using tiling arrays revealed terminal deletions extending up t
107 ulate snoRNA formation, we used high-density tiling arrays to analyze transcripts in paf1Delta cells
108 nic 'dark matter' transcription was found by tiling arrays to be pervasive, it was seen to contribute
110 is (ChIP-chip) experiments with whole-genome tiling arrays to compare Su(Hw), dCTCF, boundary element
112 oprecipitation along with Drosophila genomic tiling arrays to define potential targets of the glial t
115 tical strategy using customized high-density tiling arrays to investigate coordinated patterns of gen
116 matin immunoprecipitation linked to promoter tiling arrays to profile H3 lysine-9 acetylation (H3K9Ac
118 probes on the Affymetrix whole human genome tiling arrays to the entire genome in less than 6 CPU ho
119 rescue system as well as through the use of tiling arrays we detected the SCL/TAL1, LMO2, Ldb1, E2A
122 chnical platforms, including strand-specific tiling arrays, Agilent custom expression arrays, strand-
124 5R human adrenocortical cells using promoter tiling arrays, leading to the identification of 445 gene
126 q), supplemented with data from high-density tiling arrays, to globally sample transcripts of the fis
127 identified by hybridization to high-density tiling arrays, validated by quantitative PCR, and tested
130 ssay, MIRA) in combination with whole-genome tiling arrays, we have characterized by MIRA-chip the en
131 ecipitation (ChIP) coupled with whole genome tiling arrays, we identified 5299 genomic regions of PPA
134 DNA oligonucleotide probes for high-density tiling arrays, which can be used in a number of genomic
150 , using fragments of (3(3).4(2)) Archimedean tiling as the 'wetting layer' between the periodic and a
151 Finally, the design of the quasicrystalline tilings as platelets in nematic liquid crystals is inher
152 plates self-assemble into long-range ordered tilings at the liquid-air interface formed by a hexane w
154 achieved in the form of original Penrose P1 tiling by using pentagonal colloidal platelets in layers
155 hromatin affinity precipitation coupled with tiling chip (ChAP-chip) and ChAP followed by quantitativ
156 iant (CNV) prediction pipelines and an exome-tiling chromosomal microarray were also applied to ident
158 n this, we propose a measure (the spike time tiling coefficient) to replace the correlation index.
163 e systems is via the propagation-reaction of tiling defects, giving rise to dynamic heterogeneity.
165 ghput method, cis-regulatory element scan by tiling-deletion and sequencing (CREST-seq), for the unbi
168 ranged in a circuit-specific manner and that tiling does not apply universally across brain regions a
170 on studies with repetitive and nonrepetitive tiling error we show that both algorithms are only remov
171 irst derive an extreme member of this unique tiling family by showing that the "holes" in the optimal
175 ion, and number per individual, cumulatively tiling >99% of the genome, with an average of 10 indels
178 om shading and texture flows, as well as the tiling hypothesis of the visual space for different curv
182 sterior parietal cortex coded information by tiling in time neurons that were transiently informative
183 x molecules and may be mapped onto a rhombus tiling in which an ordered array of vertices is embedded
186 entral to our design of the quasicrystalline tilings is the symmetry breaking imposed by the platelet
187 ns across the palmar surface of the hand and tiling it with receptors at their known densities, we re
189 performance by using a real-time adjustable tiling light sheet and creating a flexible compromise be
192 By using an antisense oligonucleotide (ASO)-tiling method, we systematically screened the proximal i
193 small effect size is a necessary feature of tiling microarray 'peak' finding algorithms, as cellular
194 atin immunoprecipitation (ChIP) coupled with tiling microarray (chip) experiments have been used in a
195 nt years, from hybridization with spotted or tiling microarray (ChIP-chip), to pair-end tag sequencin
196 ere initially identified using an intergenic tiling microarray and were confirmed by northern blottin
200 opsis thaliana using ChIP and a high-density tiling microarray, and integrated this with previous map
205 rphism detection accuracy of a high-density 'tiling' microarray with 2.56 million probes by comparing
206 atin immunoprecipitation (ChIP) coupled with tiling microarrays (ChIP-chip) to determine the genomic
207 d chromatin immunoprecipitation coupled with tiling microarrays (ChIP-chip) to determine the genomic
208 r, a systematic screen using high-resolution tiling microarrays allowed us to identify a group of gen
211 genomic DNA from each strain to whole-genome tiling microarrays and detected 1.89 million single nucl
213 ion signals detected by high-density genomic tiling microarrays contain comprehensive transcriptomic
214 robe sequence composition on the efficacy of tiling microarrays for identifying novel transcription a
217 eaf tissue are hybridized to oligonucleotide tiling microarrays of the plastid ORFeome and report the
218 d by chromatin immunoprecipitation to genome tiling microarrays to construct a genome-wide map of BEA
219 d the protocol together with AGRONOMICS1 DNA tiling microarrays to establish genome-wide DNase I sens
220 parasitism may be derived through the use of tiling microarrays to establish high resolution, genome-
225 ts were analyzed by genome-wide high-density tiling microarrays, DNA sequencing, and copy number vari
227 sive evaluation of HOX gene expression using tiling microarrays, with validation, showed that distant
231 ne edge rather than covering, suggesting the tiling model is better than the covering model for struc
232 show that some of the previously identified tiling mutants fail to confine dendrites in a 2D plane.
233 polymers-single-layered polymers that form a tiling network in exactly two dimensions-have potential
235 e two key amino acids, Lys-26 and Arg-79, on tiling, not only in the crystal lattice but also in the
236 of process nodes on opposite sides, compact tiling of members of molecular complexes and extensively
237 re, the authors demonstrate that dodecagonal tiling of mesoporous silica nanoparticles occurs via irr
238 age in homotypic interactions that result in tiling of neighboring cells before the establishment of
240 rahertz quantum-cascade laser with a Penrose tiling of pentagonal rotational symmetry, reaching 0.1-0
242 tal is broken in sublayers, forming a random tiling of rectangles, large triangles and small triangle
243 nstance of pentagonal, two-dimensional Cairo-tiling of silicate tetrahedra in one of the new zeolite
246 rison and quantitative analysis suggest that tiling of the different dendritic subtrees of the same n
249 f a noncountably infinite number of periodic tilings of whose smallest repeat tiling unit consists of
250 organizational feature of astrocytes is the "tiling" of the brain with non-overlapping territories.
252 Isolation by RNA Purification (ChIRP), where tiling oligonucleotides retrieve specific lncRNAs with b
253 ing cells, showing no evidence for dendritic tiling or inter-digitation consistent with homotypic rep
254 bridize zebra finch genomic DNA to a chicken tiling path microarray and identify CNVs in the zebra fi
256 quenced 15 622 BACs representing the minimal tiling path of 72 052 physical-mapped gene-bearing BACs.
267 es), can form honeycombs with highly complex tiling patterns, with cells of up to five different comp
268 d the densest known packings of the four non-tiling Platonic solids (the tetrahedron, octahedron, dod
269 cking, the densest packings of the other non-tiling Platonic solids that we obtain are their previous
270 one bipolar cells reveals that the dendritic tiling present in maturity is achieved secondarily, afte
272 a continuous variety of length scales of the tiling, ranging over three orders of magnitude in the ty
273 DA9 motoneurons, we found that the synaptic tiling requires the PlexinA4 homolog, PLX-1, and two tra
274 performance characteristics that varied with tiling resolution and the number of replicates, which ha
275 tiling array for CGH (244,000 probes, 200 bp tiling resolution) was created to identify small regions
276 vely reduces dendritic crossing and restores tiling, revealing an additional mechanism for tiling.
277 AB(6) phase and the (3(2).4.3.4) Archimedean tiling shows the promise of further exploration on the s
278 an idealized hydrated chain was obtained by tiling space with (0.2 nm)(3) cubes and projecting the a
279 To amplify breakpoints with PCR, primers tiling specified target regions are carefully selected w
280 resent in every body segment, have dendrites tiling the larval body wall nearly completely without re
282 pe local detectors that had receptive fields tiling the stimulus and were tuned to the two directions
285 rsely distributed to permit complete retinal tiling, they lack a key feature of true ganglion cell ty
286 ents with complex particle handling modes by tiling this core element using multiple transformation o
287 ltonian complexity techniques with aperiodic tilings, to construct a Hamiltonian whose ground state e
288 ed the molecular basis of self-avoidance and tiling, two fundamental principles required for the form
289 of periodic tilings of whose smallest repeat tiling unit consists of one regular octahedron and six s
291 athways of quasicrystalline materials, where tiling units arrange with local but no long-range order,
294 ation and repression profiling with reporter tiling using MPRA (Sharpr-MPRA), that allows high-resolu
297 spatial periodicity similar to a triangular tiling with a corresponding well-defined hexagonal struc
299 f two sizes, leading to a family of periodic tilings with units composed four small tetrahedra and tw
300 l viruses in this family can be described by tilings with vertices corresponding to subsets of a quas
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