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4 largest of which is the D(3)(h)()-symmetric "trefoil" 2 and is composed of three [18]annulenes fused
6 d that the topological landscape of the beta-trefoils allows for the population of diverse, geometric
7 s, propellers, 2-solenoid, super-roll, clam, trefoil and box are not widely distributed and were prob
8 components in both PK and DSAEK groups were trefoil and coma from the anterior corneal surface (P <
10 CC harbors two lectin-like domains: the beta-Trefoil and the beta-Prism domains; however, precise con
11 sitions in the pseudo-symmetric units of the trefoil, and are juxtaposed to one another in conformati
12 hanges in astigmatism, spherical aberration, trefoil, and coma with accommodation, which must arise f
13 r generally poor thermal stability, the beta-trefoil architecture appears capable of substantial ther
16 linear DNAs demonstrates that the two chiral trefoils are produced in equal amounts, suggesting that
19 or (EGF-R) activation was also necessary for trefoil auto- and cross-induction, and both spasmolytic
21 ations and surface features of the family of trefoil cell motility factors (porcine SP, pS2, and hITF
24 an square of total higher order aberrations, trefoil, coma, tetrafoil, secondary astigmatism, and sph
25 P > 0.05), but the WF-guided group had less trefoil compared with the WF-optimized group (0.14 +/- 0
26 e N- and C-terminal regions outside the beta-trefoil core in FGF9 are ordered and involved in the for
28 he betaC'-betaE loop interacts with the beta-trefoil core region of FGF1, in the FGF1-FGFR3c structur
33 n motifs, we expressed the isolated VVH beta-trefoil domain and used glycan-chip screening to identif
34 intermolecular disulfide bonds via an extra-trefoil domain cysteine residue and are present in vivo
36 gnificant structural differences between the trefoil domain in the monomer and dimer TFF3 are in the
38 RAM domain of Notch interacts with the beta trefoil domain of CSL; however, the C-terminal domain of
41 s in loop regions within the C-terminal beta-trefoil domain which showed greatly reduced ganglioside
43 de (SP, 106 residues) form a small family of trefoil domain-containing mammalian cell motility factor
47 s compared with the TFF1 dimer where the two trefoil domains are connected by a flexible region with
48 h N-terminal mART and C-terminal tandem beta-trefoil domains associate to form an overall architectur
49 triplicated repeats in each of the four beta-trefoil domains of fascins are significantly similar in
50 eals a novel arrangement of four tandem beta-trefoil domains that form a bi-lobed structure with appr
53 f strongly induced after mucosal damage, the trefoil/EGF-R relationship may be pivotal in the generat
55 e factors revealed that the human intestinal trefoil factor (ITF) gene promoter bears a previously un
56 ' flanking sequence of the murine intestinal trefoil factor (ITF) gene was found to confer goblet cel
60 GF-I, interleukin (IL)-1beta, and intestinal trefoil factor (ITF) messenger RNAs (mRNAs) were measure
61 out inducing marker genes such as intestinal trefoil factor (ITF) or myo-inositol-1-phosphate synthas
64 molytic polypeptide (rHSP) or rat intestinal trefoil factor (ITF) were administered at different dose
66 ially ameliorate injury including intestinal trefoil factor (ITF), a small protease-resistant peptide
68 in the intestine-specific peptide intestinal trefoil factor (ITF), in which colonic restitution is le
72 (81%) of the gene encoding murine intestinal trefoil factor (mITF) and its whole genomic organization
73 and efficacy of recombinant human intestinal trefoil factor (rhITF) administered as topical oral spra
74 eceptor (TLR) 2 and modulation of GC-derived trefoil factor (TFF) 3 are functionally linked in the in
77 ed in malignant brain tumors (DMBT1) and the trefoil factor (TFF) proteins have all been proposed to
78 d for Ki67, ER, progesterone receptor (PgR), trefoil factor 1 (PS2), HER1 (epidermal growth factor re
79 repress estrogen-stimulated transcription of trefoil factor 1 (TFF1 or pS2) by stalling RNA polymeras
80 ), comprising the regulatory elements of the trefoil factor 1 (Tff1) gene and the tamoxifen-inducible
85 -mediated induction of many genes, including trefoil factor 1 and keratin 14, were inhibited by great
86 n of the estrogen-regulated proteins PgR and trefoil factor 1, regardless of HER1/2 status (P < 0.000
87 erstood, this study investigated the role of trefoil factor 2 (TFF2), a well-established regulator of
88 previously identified hypomethylated genes (trefoil factor 2 and lipocalin 2) between pancreatic and
89 se tags corresponded to genes (lipocalin and trefoil factor 2) previously shown to be overexpressed i
90 his study, we demonstrate in mice that TFF2 (trefoil factor 2), an epithelial cell-derived repair mol
91 of cells that coexpressed intrinsic factor, trefoil factor 2, and Griffonia (Bandeiraea) simplicifol
93 munohistochemical staining for the biomarker Trefoil Factor 3 (TFF3), could be used to identify patie
94 x10(-16); MAF=0.22) in LRP2 (associated with trefoil factor 3 [TFF3]), and rs11048230 (P=4.77x10(-8);
95 a14) and masculine (cytochrome P450 4a12 and trefoil factor 3) genes, as well gender-neutral (H19 fet
96 gelatinase-associated lipocalin, cystatin C, trefoil factor 3, tissue inhibitor of metalloproteinase
97 probably because of the higher expression of trefoil factor 3, Toll-interacting protein, and zonula o
98 ion (cyclooxygenase-2 [COX-2] and intestinal trefoil factor [ITF]), and prostaglandin E2 (PGE2) level
99 ecreased apoptosis, and decreased intestinal trefoil factor expression in the mucosa of both the smal
100 observed robust regulation of the secretory trefoil factor family (TFF) members, including a causal
104 neck cells located below the isthmus express trefoil factor family 2 (TFF2) protein, TFF2 messenger R
106 cursor compartment for IPMNs and the role of Trefoil factor family 2 (TFF2)-a protein expressed by PD
107 e rapid emergence of spasmolytic polypeptide/trefoil factor family 2 (TFF2)-expressing metaplasia (SP
111 gene that encodes a peptide belonging to the trefoil factor family of protease-resistant peptides.
112 the first demonstration that a member of the trefoil factor family of proteins is bound covalently to
118 al control of GalNAc transfer by single TFF (Trefoil factor) domains as high stringency determinants.
120 tinct members of the family (pS2, intestinal trefoil factor, and spasmolytic polypeptide) are produce
121 nes (multidrug resistance gene-1, intestinal trefoil factor, CD73), resulting in attenuated loss of b
122 other surface molecules, such as intestinal trefoil factor, help to maintain the structural integrit
126 he genes (claudin4, lipocalin2, 14-3-3sigma, trefoil factor2, S100A4, mesothelin, and prostate stem c
129 forming growth factor, melatonin, serotonin, trefoil factors and H2S all enhance mucosal barrier func
132 hanisms in ulcer healing, the interaction of trefoil factors with the mucus gel, the interaction of g
135 rget genes upregulated by GATA-4 and -5, the trefoil factors, inhibinalpha, and disabled-2 (Dab2) are
136 talloproteinases, heat-inducible factors and trefoil factors, protective functions of submucosal mono
137 ts indicate that the global fold of the beta-trefoil family determines the energy landscape but that
140 spasmolytic polypeptide, is a member of the trefoil family of peptides and is expressed primarily in
141 can potentially be exploited for other beta-trefoil family proteins in the IL-1 and FGF families.
145 lop designer cytokine activity into the beta-trefoil fold and may be of general use in regulation of
152 interactions within the pseudosymmetric beta-trefoil fold of IL-1beta highlight the backbone water in
156 the extrinsic effect of lectin domains (beta-trefoil fold) of polypeptide GalNAc-transferases (ppGalN
158 phobic core residues that stabilize the beta-trefoil fold, as well as interfacial residues that are l
159 viously revealed that they both adopt a beta-trefoil fold, similar to those found in Kunitz soybean t
160 tor-1, a member of the 3-fold symmetric beta-trefoil fold, was subjected to a series of symmetric con
166 rands, distinguishing cospin from other beta-trefoil-fold serine protease inhibitors in which beta4-b
168 the anterior corneal surface (P < 0.05) and trefoil from the posterior corneal surface (P < 0.05).
172 ed, showed reduced expression of the gastric trefoil genes SP and pS2, suggesting that trefoil peptid
173 n (HSQC) NMR spectra confirmed that the beta-trefoil global fold was largely intact under these three
174 within the immunodominant H chain as a beta-trefoil (Hcbetatre) structure; we hypothesize that induc
175 uces more negative-noded than positive-noded trefoils, indicating an asymmetry in the interaction bet
177 f this tail suggests that ClpXP tightens the trefoil knot against GFP, which prevents GFP unfolding.
181 strategy for the preparation of a molecular trefoil knot from a flexible bipyridine oligomer and a z
182 ere the near-quantitative self-assembly of a trefoil knot from a naphthalenediimide-based aqueous dis
183 e stereoselective synthesis of a left-handed trefoil knot from a tris(2,6-pyridinedicarboxamide) olig
188 to show that the free energy cost to form a trefoil knot in the denatured state of a polypeptide cha
189 slipknot can be transformed into a tightened trefoil knot involving approximately 13 amino acid resid
190 ut the use of only (R,R)-1 leads solely to a trefoil knot of Lambda-handedness, whereas (S,S)-1 forms
191 ional methods to investigate the effect of a trefoil knot on the breaking strength of a polymer stran
194 tein Data Bank, a previously unreported deep trefoil knot was found in acetylornithine transcarbamyla
198 the AdoMet-binding pocket, formed by a deep trefoil knot, contains a bound phosphate molecule, which
205 embers of the alpha/beta-knot clan form deep trefoil knots in their native backbone structure, a topo
207 roteins considered to be knotted form simple trefoil knots with one end of the chain extending throug
208 rom small-molecule building blocks have been trefoil knots, the first pentafoil knot was recently syn
209 structures and colloidal particles, such as trefoil knots, with 'frozen' orientational order of flak
210 strategy is reported for the production of a trefoil knotted polymer from a copper(I)-templated helic
213 Here, we characterized the effects of the trefoil-knotted protein MJ0366 from Methanocaldococcus j
215 biaceae type 1 RIPs fused with a double beta trefoil lectin gene similar to the actual Cucurbitaceae
223 of macromolecules indicates that the simple trefoil or 'overhand' knot is likely to be present in an
224 y favour the formation of constructs tied in trefoil or pentafoil, or even of more exotic torus knots
225 showed the lowest values at central zone for trefoil (P = .043) and tetrafoil (P = .002) in AC group.
226 ned unchanged (P = 0.07) while the change in trefoil (P = 0.047) postoperatively, was not clinically
232 -coated pits, suggesting that integration of trefoil peptide responses may occur after internalizatio
236 to block apoptosis correlated with a loss of trefoil peptide-induced transactivation of the EGF recep
239 al anti-inflammatory agents, confirming that trefoil peptides increased the barrier properties of the
241 ic trefoil genes SP and pS2, suggesting that trefoil peptides may individually regulate transcription
242 ines the effects of exogenously administered trefoil peptides on experimental injury in rats in vivo.
244 may be responsible for marked resistance of trefoil peptides to proteolytic digestion, enabling them
246 nked to those encoding the other known human trefoil peptides, namely the breast cancer estrogen-indu
247 enerating bicarbonate, mucus, phospholipids, trefoil peptides, prostaglandins (PGs), and heat shock p
248 there have been striking findings regarding trefoil peptides, the protective effect of regulatory pe
253 a are shared among other members of the beta-trefoil protein family, although clear differences can e
254 op 2/loop 3 regions, which suggest that each trefoil protein has a specific target or group of target
256 These showed that the 6.67 kDa secreted trefoil protein is present as an approximately 25 kDa co
263 have explored the sequence space of all beta-trefoil proteins and have determined that the actin-bind
264 provide statistical evidence that these beta-trefoil proteins are all homologues, having arisen from
269 ssary for this response, suggesting that the trefoil receptor or its signal transduction is GSH sensi
273 synthesis and characterization of star- and trefoil-shaped polyethynyl aromatic structures, which re
275 at might function either supporting the beta-trefoil structure or in the communication between both s
276 -1beta (IL-1beta) structural motif is a beta-trefoil super fold created by six two-stranded beta-hair
279 The interaction between DMBT1(gp340) and trefoil TFFs proteins was investigated using an ELISA as
281 lly important cytokine with a symmetric beta-trefoil topology, are characterized using optical spectr
285 forms, especially in the P1.1 helix and the trefoil turn in the single-stranded region connecting P4
286 that this local conformational change in the trefoil turn is kinetically coincidental with a previous
291 pair and the A-minor motif of the catalytic trefoil turn that depend on the identity of the N-1 base
295 versions of an extant protein fold (the beta-trefoil) were produced by top-down symmetric deconstruct
298 tively were vertical coma (Z3(-1)), vertical trefoil (Z3(-3)), and secondary astigmatism (Z4(4)).
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