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1 non-tryptic (AAHAL, AHAAL, AHADL, AHDAL) and tryptic (AAAHK, AAHAK, AHAAK, HAAAK, AAAHR, AAHAR, AHAAR
2 stidine-containing pentapeptides of both non-tryptic (AAHAL, AHAAL, AHADL, AHDAL) and tryptic (AAAHK,
3 226)Glu mutants of mouse cathepsin G acquire tryptic activity and human ability to activate prourokin
10 lowly digested at 1 to 2 out of 14 potential tryptic and chymotryptic cleavage sites under duodenal c
11 lly demonstrate the lack of commutability of tryptic and cleavable SIL peptides as internal calibrato
17 pectrometry because of the hydrophobicity of tryptic cleavage peptides on the one hand and the noncov
19 eptide products expected under commonly used tryptic conditions, we observe that peptides are formed
22 ilico identify the peptides from the E. coli tryptic digest and show the increased confidence in pept
24 okinetic elution and sample stacking using a tryptic digest of 16 proteins to maximize peptide identi
25 ilar results were obtained when evaluating a tryptic digest of a cellular lysate, representing a more
26 strated by fractionating the separation of a tryptic digest of a known protein mixture onto the micro
27 electrospray interface for the analysis of a tryptic digest of a sample of intermediate protein compl
31 yses of complex biological samples such as a tryptic digest of bovine serum albumin and a carnitine s
32 peptides from injection of only 1 pmol of a tryptic digest of bovine serum albumin using an eluent f
33 illary LC for the analysis of substance P, a tryptic digest of bovine serum albumin, and a phosphopep
36 The approach is illustrated by examining a tryptic digest of cytochrome c and by identifying a pept
37 bilities of 2D FT-ICR MS are explored with a tryptic digest of cytochrome c with both ECD and IRMPD a
39 ber of peptides and proteins identified in a tryptic digest of E. coli cell lysate increased by 13% a
40 the enzyme transglutaminase 2) or the peptic-tryptic digest of gliadin (in native and deamidated form
42 selective enrichment of phosphopeptides from tryptic digest of standard protein (alpha-casein, beta-c
44 ll of reversed-phase C18 functionality) to a tryptic digest of whole Jurkat cell lysate to estimate t
45 muFFE analysis of a Chromeo P503-labeled BSA tryptic digest produced a 2D separation that made effect
46 anoLC-FAIMS-MS/MS of an unfractionated yeast tryptic digest using the modified FAIMS device identifie
47 xoid has been established by analysis of its tryptic digest using two-dimensional liquid chromatograp
48 eline resolved, and peptides from an albumin tryptic digest were much better resolved than with exist
49 t of casein phosphopeptides from a simulated tryptic digest with bovine serum albumin (BSA:casein, 10
50 ior to cleanup by immunoaffinity extraction, tryptic digest, and preconcentration by solid-phase extr
51 quantities (100 ng) of a Pyrococcus furiosus tryptic digest, but with mass-limited amounts (5 ng) CE
53 f small molecules and a bovine serum albumin tryptic digest, TASF improved the peak shape and resolut
58 tified and quantified the abundance of 1,056 tryptic-digested peptides, representing 163 proteins in
60 onto a polymer surface, followed by in situ tryptic digestion and comparative analysis using DESI-MS
61 on blocks lysine side chains, and subsequent tryptic digestion and N-terminal peptide derivatization
62 , ubiquitinated peptides were enriched after tryptic digestion by peptide immunoprecipitation using a
65 Our results demonstrate that LFASP-based tryptic digestion is efficient, robust, reproducible, an
68 tion of mAbs with intact disulfide bonds and tryptic digestion of mAbs after reduction and alkylation
69 nd sequencing of phosphopeptides obtained by tryptic digestion of protein extracts from HeLa cells.
70 to dissociate ADA-drug bindings, followed by tryptic digestion of protein pellets and subsequent LC-M
72 em can realize rapid, efficient and reusable tryptic digestion of proteins by taking advantage of its
73 technique for protein separation, and in-gel tryptic digestion of resolved protein bands has enhanced
75 the determination of thiolic peptides after tryptic digestion of serum albumins from different speci
78 chromatography (IMAC), which was followed by tryptic digestion of the enriched sample and quantificat
81 s were generated based on a previous limited tryptic digestion result and hydrogen-deuterium exchange
82 ication of 10 pg/mL, while introduction of a tryptic digestion step, followed by quantification of a
84 olyzing succinimide in H(2)(18)O followed by tryptic digestion were used to label and identify the si
85 ids reformation of disulfide bonds to enable tryptic digestion without alkylation of cysteine residue
86 the performance of "bottom-up" (in-solution tryptic digestion), "top-down" (intact protein fragmenta
87 ltistep sample cleanup at the protein level, tryptic digestion, and isotope dilution mass spectrometr
88 atography of protein on cobalt-loaded beads, tryptic digestion, and MALDI MS analysis are performed i
89 only used in protein solubilization prior to tryptic digestion, but the presence of the DS(-) hampers
90 This method involves optimization of in situ tryptic digestion, followed by reproducible and uniform
91 radigm of chemical cross-linking followed by tryptic digestion, mass spectrometry, and database searc
92 h an orthogonal traceable method using total tryptic digestion, peptide separation, and isotope dilut
93 mization of the conditions of extraction and tryptic digestion, restructured meat and blank values (t
94 otocol, which includes cell lysis, overnight tryptic digestion, sample analysis and database searchin
95 by the Fe3O4@Al2O3 MNPs followed by on-plate tryptic digestion, selective enrichment, and MALDI-MS an
96 re used to show that after glycinylation and tryptic digestion, the mass spectrometric response from
97 sis of a LLDGSSTEIR glycopeptide released by tryptic digestion, which carried two variant structures,
104 cular species derived from trastuzumab after tryptic digestion: a stable signature peptide (FTISADTSK
105 n in a high boiling point solvent, and (iii) tryptic digestions of cytochrome c at 22 and 40 degrees
107 mics experiments rely on prefractionation of tryptic digests before online liquid chromatography-mass
108 ntiated from nonmodified peptides in complex tryptic digests created upon proteolysis of proteins aft
109 online LC-MS analysis of hemoglobin and its tryptic digests directly from microliters of blood, achi
111 s pump to perform nanoflow HPLC separations; tryptic digests of bovine serum albumin (BSA), transferr
115 n sites after ablation of CypD, we subjected tryptic digests of isolated cardiac mitochondria from wi
119 S) cross-linked precursors, derived from the tryptic digests of three model proteins (Human Serum Alb
120 k areas of the two transition fragments from tryptic digests of whey proteins in stored milk protein
121 furosine results indicated that MRM based on tryptic digests of whole products was a feasible method
123 l 60 F(254S) plate and peptides from protein tryptic digests separated on a ProteoChrom HPTLC Silica
124 9 and 12 amino acids that represent typical tryptic digests were designed, synthesized, and analyzed
127 with trypsin in protonated solution, and the tryptic digests were then analyzed via liquid chromatogr
128 m fetuin, glycophorin A, ovalbumin and gp120 tryptic digests were used to build a spectral database o
129 The strategy includes periodate oxidation of tryptic digests, solid-phase enrichment of glycopeptides
135 eased the formation of the 95-kDa C-terminal tryptic fragment when detected by an Ab directed at a C-
137 n of the epitope, we isolated immunoreactive tryptic fragments by Western blotting and analyzed them
139 this reagent are easily separated from other tryptic fragments using strong cation exchange chromatog
141 hieved, which led to the identification of 7 tryptic glycopeptides from HRP and 16 glycopeptides from
144 eparation and characterisation of enzymatic (tryptic) hydrolysates of water-soluble proteins from Bac
146 homology in the phosphopeptides released by tryptic hydrolysis and simulated gastrointestinal digest
147 enatured proteins were used as substrate for tryptic hydrolysis and the hydrolysis progress was chara
150 d that doxycycline can inhibit activation of tryptic KLKs through an indirect mechanism by inhibition
151 live keratinocytes during the production of tryptic KLKs, this treatment indirectly resulted in decr
152 ving as orientation probes, indicate that in tryptic/Lys-C peptides the C-terminal carboxyl group app
154 bin in restructured meat was developed using tryptic marker peptides of TG (five markers), and bovine
155 e through identification of peptides without tryptic miscleavages or posttranslational modifications,
156 It also differs from human in resisting tryptic peptidase inhibitors (e.g., aprotinin), while fa
159 nal activation of modified lysine-terminated tryptic peptide anions is consistent with a covalent mod
160 ed multiple reaction monitoring quantitative tryptic peptide assays were developed for each phosphory
161 ein concentration was shown to be unequal to tryptic peptide concentrations for most peptides, includ
162 ometry (LC-MS) with tandem MS (MS/MS) of the tryptic peptide containing the intramolecular disulfide
163 pproach simplified the detection of glycated tryptic peptide elution in the LC/MS analysis by giving
164 to analysis by MALDI-TOF mass spectrometry, tryptic peptide fingerprinting, molecular characterizati
165 ne strong cation exchange chromatography for tryptic peptide fractionation and combining it with the
166 intact proteins and/or an LC-MS analysis of tryptic peptide fragments generated after the oxidation
167 ectrometry/mass spectrometry analysis on the tryptic peptide fragments indicates that the 3-fluorosia
168 E to the mobile phase of nLC/MS experiments, tryptic peptide identifications increased from 93 to 111
169 ss spectrometry (IMS-MS) study revealed that tryptic peptide ions containing a proline residue at the
170 ser desorption/ionization (AP-MALDI)-derived tryptic peptide ions have been subjected to ion/ion reac
171 viously been shown that photodissociation of tryptic peptide ions with 157 nm light in a matrix-assis
174 rom cation-exchange chromatography (CEX) and tryptic peptide maps generated with the new digestion me
177 eptide analytes from both simple and complex tryptic peptide matrices using selected reaction monitor
178 roscopy, separated protein fluorescence, and tryptic peptide modification in liquid chromatography-ta
180 single artificial protein to create internal tryptic peptide standards for MS as well as an intact pr
181 digestion and quantitation of a NGF-derived tryptic peptide via high-flow peptide immunoaffinity enr
182 s in the mass spectra of this doubly charged tryptic peptide, based solely on its amino acid sequence
183 nd MeArg were not found together on the same tryptic peptide, suggesting reciprocal regulation of the
185 oaches using selected reaction monitoring of tryptic peptides (also known as bottom up) have become c
186 d substrate ssDNA bind to the same three A3G tryptic peptides (amino acids 181-194, 314-320, and 345-
187 hout enrichment of glycopeptides from global tryptic peptides and at a false discovery rate of 1%, 10
188 as obtained using PACE-MSI for both digested tryptic peptides and endogenous neuropeptides from compl
191 sing mass spectra of the cysteine-containing tryptic peptides and used to follow the unfolding of eac
192 g synthetic heavy isotope-labeled C-terminal tryptic peptides as spiked standards with a triple quadr
194 sp. NRC-1 and identified the sequence of 23 tryptic peptides by nano-liquid chromatography electrosp
195 ed the mass distributions of all theoretical tryptic peptides composed of 20 natural amino acids and
196 the analysis of coeluting model peptides and tryptic peptides derived from human plasma proteins, all
197 no acid pools in barley leaves and then into tryptic peptides derived from newly synthesized proteins
198 CID as the unmodified cations for the small tryptic peptides examined here and more sequence informa
200 ent sequencing approach, a collection of 266 tryptic peptides from 23 model proteins were analyzed an
203 esulting peptide anions, as demonstrated for tryptic peptides from bovine serum albumin and Halobacte
204 y, was evaluated using a mixture composed of tryptic peptides from caseins, bovine serum albumin, and
205 ed deamidation half-life for three different tryptic peptides from collagen (I) ranged from 2000 to 6
206 even (15)N-labeled QconCATs that cover seven tryptic peptides from human clusterin with a length of n
207 samples containing approximately 100 mug of tryptic peptides from mouse cerebrocortical brain tissue
208 gradation and mass spectrometric analyses of tryptic peptides from rat DSP-PG, along with substitutio
209 five pH bumps were applied to elute E. coli tryptic peptides from the monolith, followed by analysis
210 derivatives and the production of different tryptic peptides from the unmodified and modified versio
216 eries of epitope sequences concatenated with tryptic peptides in a single artificial protein to creat
217 sured both the quantity and kinetics of SP-B tryptic peptides in tracheal aspirate samples of symptom
221 substance P peptide, as well as a mixture of tryptic peptides obtained by enzymatic digestion of cyto
223 ometer and applied for the separation of the tryptic peptides of a six-protein mixture and for the pr
226 the tested BGEs, the best resolution of the tryptic peptides of extracted proteins of the above thre
228 untargeted "adductomics" method detected 50 tryptic peptides of HSA, containing Cys34 and prominent
230 MS method for the direct detection of unique tryptic peptides of the KPC protein in clinical bacteria
231 ion concatamer (QconCAT) carrying prototypic tryptic peptides of UCH-L1 was used as an internal stand
232 lyze an interference model system comprising tryptic peptides of yeast that we contaminated with huma
233 times the peptides were observed relative to tryptic peptides or those guanidinated with the conventi
234 oteome level by examining the quality of the tryptic peptides prepared by on-surface nanodiamond dige
235 he LC/MS/MS analysis of the affinity-labeled tryptic peptides purified from HPLC, identified two majo
236 spectrometry analysis of >330,000 synthetic tryptic peptides representing essentially all canonical
238 all isoforms of APP concatenated with those tryptic peptides that are unique for specific APP isofor
239 es were driven by the spatial orientation of tryptic peptides upon interaction with the negatively ch
240 igestion, online enrichment of IL-21 derived tryptic peptides using antipeptide antibodies, and quant
241 eptides in addition to a complex mixtures of tryptic peptides using LC-MS/MS, showing not only that A
243 motifs in interacting proteins, their unique tryptic peptides were analyzed by the motif scan softwar
245 by one-dimensional gel electrophoresis, and tryptic peptides were extracted from gel slices and anal
246 excised, and Ala-/Gly-rich, allele-specific tryptic peptides were identified by liquid chromatograph
247 ristics of these standards and collection of tryptic peptides were mapped into hydrophobicity index (
248 were digested, and evolutionarily conserved tryptic peptides were quantified using isotope-dilution
249 ction; (iii) enrichment of the biotin-tagged tryptic peptides with streptavidin; (iv) liquid chromato
250 cal lengths (e.g. shorter/longer than common tryptic peptides) and lack of tryptic residues to facili
251 sotopic tags to both the N- and C-termini of tryptic peptides, and second, a search engine (based on
253 ography tandem mass spectrometry analysis of tryptic peptides, followed by searching an appropriate s
255 nown histone H3/H4 acetylated and methylated tryptic peptides, we identified novel H3 K18 methylation
256 age intensities of spiked synthetic catalase tryptic peptides, which we used as an internal standard,
268 lision Induced Dissociation (CID) spectra of tryptic peptides], their performance often deteriorates
269 by two-dimensional thin layer chromatography tryptic phosphopeptide profiles suggested that Ser-395 w
270 ied the ratio of (18)O- versus (16)O-labeled tryptic phosphopeptide using high mass accuracy mass spe
275 gineer the sequence of EsxA to add desirable tryptic properties aimed at improving complex MS analysi
276 ntitative differences in CZE-UV profiling of tryptic protein digests were found, which can be potenti
280 evidence of T cell activation by peptic and tryptic (PT) digests of gliadins from 2 monococcum lines
281 er than common tryptic peptides) and lack of tryptic residues to facilitate peptide ionization/fragme
283 n kallikrein-related peptidase 2 (KLK2) is a tryptic serine protease predominantly expressed in prost
284 important means of evolving new functions of tryptic serine proteases from transmembrane ancestors.
288 . Pharmacopeia (USP) chapter <797> calls for tryptic soy agar with polysorbate and lecithin (TSApl) f
289 sms in double-distilled water (ddH2O) versus tryptic soy broth (TSB) to incubate disks, and incubatio
290 n several formulations of 4 different media (tryptic soy broth (TSB), brain-heart infusion (BHI), Lur
291 s and Escherichia coli O157:H7 cultivated in tryptic soy broth at 4, 22, and 35 degrees C for up to 7
292 ns by 2 methods: (i) inoculation of swabs in tryptic soy broth containing 2 microg/ml imipenem follow
294 g of two 45-min exposures per 24-h period in tryptic soy broth followed by immersion in a remineraliz
296 bapenem inactivation method (mCIM), in which tryptic soy broth was substituted for water during the i
297 ease in biofilm density in cells cultured in tryptic soy broth with 1% glucose (TSBG) when selenite w
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