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1  of both of the proteins from nsDNA (plasmid unpairing).
2 capturing the -11A subsequent to spontaneous unpairing.
3 t -11 of the template strand in overall base unpairing.
4 veral other positions did not affect thymine unpairing.
5 ons confer a high propensity for stable base unpairing.
6 r of the stem loop structure that allows DNA unpairing.
7 strates and products that were indicative of unpairing.
8 hin MARs that is highly potentiated for base unpairing.
9       Divalent metal ions were essential for unpairing.
10  promoter that has been partly pre-opened by unpairing a short segment of the transcription bubble.
11                                          The unpairing allows a nanoscale cavity to form at the junct
12 acids are not required for double nucleotide unpairing and appear to act cooperatively, whereas the h
13 e its fluorescence is sensitive to both base-unpairing and base-unstacking and to the nature of the n
14          Our results support a model whereby unpairing and unstacking of the terminal base pairs is a
15  distortion activity is consistent with both unpairing and unstacking of the three terminal base pair
16  formation, but this can be bypassed by base unpairing, and even a completely single-stranded signal
17                          We suggest that DNA unpairing around the signal-coding border is essential f
18 fixed distance, the kinetic rates for strand unpairing at fixed applied force, and the rupture force
19 f unpaired thymine residues, we studied base unpairing at the -10 region during isomerization upon RN
20 er upon RNA polymerase binding involves base unpairing at the -10 region.
21                Additionally, we detected the unpairing-dependent loss of a transcript during meiotic
22  bending, the ssDNA gateway, and double-base unpairing flanking the scissile phosphate control precis
23         Previous studies have indicated that unpairing, "fraying," of the viral DNA ends by IN contri
24 alysis and chemical probing indicate greater unpairing in A+T-rich sequences in other regions of the
25 d atomic force microscopy detected local DNA unpairing in supercoiled plasmids.
26 erhelical energy required to initiate duplex unpairing is essentially length-independent from eight t
27                 Cohesin-mediated pairing and unpairing likely provides a counting mechanism for evenl
28      From these results we propose that such unpairing may enhance both the processing and the joinin
29 es utilize variations of a basic pairing and unpairing mechanism for faithful segregation during mito
30 vivo analysis suggests neither profound base unpairing nor protein binding within the MT-I R/Y sequen
31 r at the -11 position of P1 and P3 prevented unpairing not only at that position but also at the othe
32 as never been clear, however, whether duplex unpairing occurs during mitotic replication or during st
33 In plasmids containing five repeats, minimal unpairing of (ATTCT)(5).(AGAAT)(5) occurred while 2D gel
34 g-a) motif is utilized in the "unzipping" or unpairing of bases that occurs when RT binds a malleable
35 th our previous observations indicating that unpairing of target DNA promotes the joining reaction.
36         Sequence alterations that facilitate unpairing of the bases at the signal/coding border activ
37 e that binding of CCE1 results in a complete unpairing of the four central base-pairs of the junction
38                                              Unpairing of the two base pairs downstream of the primer
39 te-limiting physical step, such as substrate unpairing or helical arch ordering, that occurs after su
40 f well mixed As, Ts, and Cs confer high base unpairing propensity under negative superhelical strain.
41 izing a special DNA context with strong base-unpairing propensity.
42  with an ATC sequence context with high base-unpairing propensity.
43  displacement synthesis and suggest that the unpairing reaction is mediated by an intimate associatio
44 65-kDa major fragment containing both a base-unpairing region (BUR)-binding domain and a homeodomain.
45 e the core unwinding element within the base-unpairing region.
46                                    Such base unpairing regions (BURs) are typically found in scaffold
47                                    Such base-unpairing regions (BURs) are typically identified within
48                                         Base-unpairing regions (BURs) contain a specialized DNA conte
49 ibute is the presence of stress-induced base-unpairing regions (BURs).
50 e show that these defects can be repaired by unpairing short (3 or 5 bp) DNA segments spanning the tr
51 is specificity arises from double nucleotide unpairing that places the scissile phosphate diester on
52                The other half is utilized in unpairing the +1 to +2/+3 GG/G sequence for initiation.
53     This specificity is proposed to arise by unpairing the 5'-end of duplex to permit the scissile ph
54 everse transcriptase plays an active role in unpairing the DNA ahead of the translocating polymerase.
55 and hairpin products, as well as likely base unpairing to produce single-stranded (ss) DNA near the c
56 ere we monitored DNA bending by FRET and DNA unpairing using 2-aminopurine exciton pair CD to determi
57 ow that the kinetics of DNA base pairing and unpairing, which are fundamental to both the biological

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