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1 hile hydrolyzing approximately 5 ATPs per bp unwound.
2 telomeric duplexes that are otherwise poorly unwound.
3 to the substrates that were the most readily unwound.
4 and nucleic acid that forms as duplexes are unwound.
5 as the double helix melts, and before it is unwound.
7 ing, whereby the AdnA nuclease processes the unwound 5' strand to liberate a short oligonucleotide pr
8 of the panhandle structure by N protein, the unwound 5' terminus likely remains transiently bound to
9 wild-type T antigen was able to specifically unwind a 31-bp DNA containing only site II in an ATPase-
11 d sequence bias allows NPH-II to efficiently unwind a DNA x RNA hybrid containing a purine-rich DNA t
14 f anti-CS20 antibodies the force required to unwind a single fimbria was increased several-fold and t
15 ver, replication defective mutants failed to unwind a small origin containing circular DNA whereas re
18 y base pairs it has unwound, and once it has unwound a critical length, it reverses the unwinding rea
20 However, Pif1 working with pol delta readily unwound a full-length Okazaki fragment initiated by a fo
22 her superfamily 2 helicase, RECQ1, failed to unwind all G4 substrates tested under conditions in whic
23 sodium-coupled transporter, LeuT, define an unwound alpha-helix as the central element of the ion-bi
24 isoforms and similar cleavage efficiency of unwound alpha1(I) and alpha2(I) chains suggested increas
25 icases, such as BLM and WRN, can efficiently unwind alternate/secondary structures during telomere re
27 along DNA at up to 250 bp per second and can unwind an average of 14,000 bp, with some complexes capa
28 Interestingly, 8 of the 10 mutants failed to unwind an origin-containing DNA fragment and nine of the
30 which increases the propensity of origins to unwind and adopt non-B DNA structure, rather than the ab
31 case and nuclease domains of Cas3 proceed to unwind and degrade the entire DNA target in a unidirecti
33 on of a single ATP molecule is sufficient to unwind and displace an 8 base pair rRNA strand annealed
34 ic forces are applied via electrospinning to unwind and orient the molecular chains of a non-graphiti
35 amines the ability of WRN, BLM, and RecQ5 to unwind and POT1 to bind telomeric D-loops containing 8-o
38 richia coli RNAP uses binding free energy to unwind and separate 13 base pairs of lambdaP(R) promoter
40 hyrin bound, the pi helix is not extended or unwound and is in the "substrate-bound" conformation.
43 rnover conditions, although the substrate is unwound and the repressor displaced when the single-stra
44 e further showed that blunt dsRNA is locally unwound and threaded through the helicase domain in an a
46 BLM can 'measure' how many base pairs it has unwound, and once it has unwound a critical length, it r
47 stalled forks are actively dechromatinized, unwound, and repressed by an ATR-dependent checkpoint pa
49 rce spectroscopy, we found that CS2 fimbriae unwind at a constant force of 10 pN and have a corner ve
51 nctional forms of RecQ can be assembled that unwind at rates tailored to the diverse biological funct
54 e triple helical structure has to be locally unwound before hydrolysis, but this process is not well
57 charomyces pombe showed that it can bind and unwind both DNA and RNA, but the S. pombe protein is not
58 rminated with 3'-ssDNA; however, such DNA is unwound by RecQ to create ssDNA for RecJ exonuclease.
59 s were functional RNAs (ribozymes) that were unwound by the helicase, and the first synthesised prote
68 hromosome maintenance helicase was unable to unwind DNA bound by this archaeal RNA polymerase in a st
69 s in all cell types are hexameric rings that unwind DNA by steric exclusion in which the helicase enc
72 There is much debate about how helicases unwind DNA during DNA replication and how their activity
73 singly, we find that RecBCD can processively unwind DNA for at least 80bp beyond the reverse polarity
75 rk, we have examined the ability of FANCJ to unwind DNA molecules with specific base damage that can
76 ine abolishes the ability of the helicase to unwind DNA or allow T7 polymerase to mediate strand-disp
77 hydrolysis to produce the force required to unwind DNA or destabilize protein bound to DNA is requir
79 the role of the helicase to more efficiently unwind DNA repair intermediates to maintain genomic stab
81 UvrD303 mutation may enable the helicase to unwind DNA via a "strand displacement" mechanism, which
82 ntenance (SsoMCM) helicase has been shown to unwind DNA via a SEW mode to enhance unwinding efficienc
83 nt (kcat), consequently the combined enzymes unwind DNA with kinetic parameters resembling enzymes tr
85 d of the eukaryotic replication machinery to unwind DNA, in a process that requires ATP hydrolysis.
86 igins, load the replicative helicase on DNA, unwind DNA, synthesize new DNA strands, and reassemble c
93 sDNA overhangs; helicases such as BLM, which unwind DNA; and other proteins such as BRCA1 and CtIP wh
96 g H. pylori addA(NUC)B or addAB(NUC) mutants unwound DNA but had approximately half of the exonucleas
98 , MTERF1 binds a significantly distorted and unwound DNA structure, exhibiting a protein conformation
100 this region of T antigen provides the proper unwound DNA substrate for initiation to occur, we demons
102 ular Cell, heterodimerizes with FANCM, binds unwound DNA, and reveals how the Fanconi anemia core com
105 s been observed to use dTTP, but not ATP, to unwind double-stranded (ds)DNA as it translocates from 5
109 UvrD couples ATP binding and hydrolysis to unwind double-stranded DNA and translocate along ssDNA w
110 wer concentrations of Aq793 were required to unwind double-stranded DNA that had a 3'-poly(dT) overha
111 ases utilize the energy of ATP hydrolysis to unwind double-stranded DNA while translocating on the DN
115 al ring-shaped T7 helicase molecules as they unwound double-stranded DNA (dsDNA) or translocated on s
122 EAD-box protein that utilizes ATP to locally unwind dsRNA, to investigate helicase specificity and me
124 plicative hexameric helicases are thought to unwind duplex DNA by steric exclusion (SE) where one DNA
125 uses the energy of nucleotide hydrolysis to unwind duplex DNA during mitochondrial DNA replication.
126 ns the Rep helicase activity can function to unwind duplex DNA during strand displacement synthesis.
127 DNA helicase preferentially utilizes dTTP to unwind duplex DNA in vitro but also hydrolyzes other nuc
129 picomolar concentrations and can efficiently unwind duplex DNA molecules as long as 23,000 base pairs
132 istic DNA-dependent NTPase activity, and can unwind duplex DNA substrates independently of the N-term
134 ong a DNA strand in a 3' to 5' direction and unwind duplex DNA utilizing a DNA-dependent ATPase activ
135 g, allowing it to refold, or going beyond to unwind duplex DNA, Pif1 repeatedly unwinds G4 DNA, keepi
144 ee-step mechanism in which DEAD-box proteins unwind duplexes as "local strand separators." This unwin
146 hydrolysis activity or reduce its ability to unwind duplexes show that the efficiency of ATP hydrolys
152 on with PCNA allows the helicase activity to unwind fork-blocking CAG/CTG hairpin structures to preve
153 many genetic observations, the detection of unwound fork structures in vivo and the identification o
154 y, we show that HEL308 appears to target and unwind from the junction between single-stranded to doub
155 equilibria, in which filaments progressively unwind from their native twist with increasing surface i
157 the budding yeast Pif1 known to efficiently unwind G-quadruplex rescues all the telomeric defects of
159 CJ helicase is among those helicases able to unwind G4 DNA in vitro, and FANCJ mutations are associat
161 36 uses a local, non-processive mechanism to unwind G4 substrates, reminiscent of that of eukaryotic
163 lizes exclusively adenosine triphosphates to unwind helices, oligomerizes to function as efficient RN
164 viously shown to bind to hormone as a partly unwound helix, forms a complete alpha-helix that displac
165 s, MutS and MutL, may utilize its ability to unwind Holliday junctions directly in the prevention of
173 amp opening allows DNA to be loaded into and unwound in the RNAP active-center cleft, that DNA loadin
174 mulated with a mechanism in which the DNA is unwound in two kinetic steps with rate constant of k(unw
175 positions a nucleosome, evidently partially unwound, in a structure that facilitates Gal4 binding to
177 nitiation factor eIF4B, which is critical to unwind its structured 5' untranslated region (5'UTR).
178 s manner while the second copies the already unwound lagging-strand template in a discontinuous manne
180 to the central channel of the N-tier and the unwound leading single-strand DNA traverses the channel
183 by Prp8, wild type Delta247-Brr2 is able to unwind long stable duplexes in vitro, and even the RP mu
184 ding protein POT1 stimulates WRN helicase to unwind longer telomeric duplexes that are otherwise poor
185 eins bind to structured RNAs and efficiently unwind loosely associated duplexes, which biases the pro
187 orce studied, nucleosomes containing H4-R45H unwind more rapidly and rewind more slowly than nucleoso
189 hydrolysis-coupled conformational changes to unwind mRNA secondary structures during translation init
190 ases, uses two distinct active mechanisms to unwind mRNA structure: it destabilizes the helical junct
191 helicases are dependent on their ability to unwind nucleic acid duplexes in an ATP-dependent fashion
194 the existence of two distinct states of the unwound nucleosome, which are accessible at physiologica
196 x small interfering RNAs, but were unable to unwind or eject the passenger strand and form functional
197 imulated ATPases that translocate on RNA and unwind or remodel structured RNA in an ATP-dependent fas
202 ATPase and helicase activities but failed to unwind origin DNA and support SV40 DNA replication.
203 ities but with a severely reduced ability to unwind origin DNA and to support SV40 DNA replication in
206 ppears to be dictated by the geometry of the unwound part of the transmembrane (TM) helix 3, mostly a
208 s release to the cytoplasm provided that the unwound part of TM3 switches from a shielding to a yield
209 how that PcrA, in combination with RepD, can unwind plasmid lengths of DNA in a single run, and that
211 ites attention to the functional role of the unwound portion of TM helices (TM6 Trp-202-Glu-208 in Ad
212 athway between the sodium-binding sites, the unwound portion of transmembrane helix 1 and the substra
214 branch migration by RecA, where a completely unwound product consisting of the paired nascent leading
215 d SSB; however, RuvAB generates a completely unwound product consisting of the paired nascent leading
217 ated helicases in cancer cells are unable to unwind quadruplexes, which are impediments to transcript
218 he ability of BC200 to act as an acceptor of unwound quadruplexes via a cytosine-rich region near the
223 in a substantial reduction in the ability to unwind replication fork and Holliday junction structures
224 imulate group I and group II intron splicing unwind RNA duplexes by local strand separation and have
225 Viral RNA helicases of the NS3/NPH-II group unwind RNA duplexes by processive, directional transloca
226 nt DEAD-box proteins, Ded1p and Mss116p, can unwind RNA duplexes from internal as well as terminal he
231 s a DEAD-box RNA-dependent ATPase thought to unwind RNA secondary structure in the 5'-untranslated re
233 of a very short 5' UTR, eIF4A is required to unwind RNA structure in the sapovirus genome to facilita
234 onetheless, polyadenylation enables TRAMP to unwind RNA substrates that it otherwise cannot separate.
238 two mechanisms by which RNA helicase enzymes unwind RNA: The nonprocessive DEAD group catalyzes local
239 RNA, thereby facilitating the release of the unwound rRNA mother strand and the recycling of DbpA for
240 ch syndrome, activities must also exist that unwind secondary structures to facilitate replication fi
241 omain (TM6a) that is separated by a central, unwound section from a cytoplasmically localized domain
242 D-box proteins have been shown to use ATP to unwind short RNA helices, it is not known how they disru
243 AdnAB helicase under conditions in which the unwound single strands are coated by SSB and thereby pre
244 ing a synthetic sequence that mimics freshly unwound single-stranded DNA at replication fork showed t
246 nwinding and/or by POT1 loading on partially unwound ssDNA strands to prevent strand re-annealing.
247 vironment in the absence of the receptor, is unwound starting at T(32) to provide optimal contacts in
249 r results demonstrate not only that multiple unwound states exist but that their accessibility can be
253 ity of WRN helicase by maintaining partially unwound strands in a melted state, rather than preventin
254 e, a serine and a main-chain carbonyl in the unwound stretch of trans-membrane helix 5 at the deepest
257 56 is an ATP-dependent RNA helicase that can unwind substrates with 5' or 3' overhangs or blunt ends
258 on, we tested the ability of the helicase to unwind substrates with site-specific oxidative DNA lesio
259 demonstrate that WRN and BLM preferentially unwind telomeric D-loops containing 8-oxodG and that POT
260 er eIFs, 4F, 4A, and 4B, which cooperatively unwind the cap-proximal region of mRNA and later also as
262 a "skip residue," which is likely to locally unwind the coiled-coil and perhaps contributes to the bi
265 aryotes, these factors include a helicase to unwind the DNA ahead of the replication fork, a single-s
269 t Mtr4p can, in the presence of ATP or dATP, unwind the duplex region of a partial duplex RNA substra
270 t the predominant role of UvrD in vivo is to unwind the excised 13-mer from dsDNA and that mutation o
276 imately 13 pN of force, barely sufficient to unwind the most stable structures in mRNAs, thus providi
277 ting was not the major reason they failed to unwind the origin because supplying an EP region as a mi
281 chromosome replication requires DnaA-ATP to unwind the replication origin, oriC, and load DNA helica
283 d strand displacement [TMSD] ability, helped unwind the secondary structures of the RNA molecule and
285 Brr2 is an RNA-dependent ATPase required to unwind the U4/U6 snRNA duplex during spliceosome assembl
286 anded DNA-binding protein, FANCJ efficiently unwound the DNA substrate harboring the thymine glycol d
287 ated that if the terminator DNA is partially unwound, the resulting melted DNA could bind tightly to
288 HrP helix is gently curved and C-terminally "unwound." The receptor accommodates the altered binding
291 -tail and the length of the duplex DNA to be unwound, this activity is sufficiently strong to mask th
292 ty converts it into a superhelicase that can unwind thousands of base pairs processively, even agains
294 to prevent spurious recombination events and unwind trinucleotide sequences that are prone to hairpin
296 differ when sequences are presented from an unwound triple helix versus an independent single strand
299 gical substrate that a monomer of FacXPD can unwind with a processivity sufficient for expansion of t
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