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1 lated plant material, including nicotine and uridine.
2 glycosidic bond is C-C rather than C-N as in uridine.
3 nucleosides such as guanosine, cytidine and uridine.
4 ) which is 170 nm red-shifted as compared to uridine.
5 e in this position confers high activity for uridine.
6 ex, as had been observed earlier for product uridine.
7 any cytidines (up to 40%) are converted into uridine.
8 d together with uridine or when given before uridine.
9 this end, i.e., C5-functionalization of LNA uridines.
10 nce, a GAUC repeat framed by single-stranded uridines.
11 RNA, to which it added a distinct number of uridines.
12 n, ~20% of siRNA 3' ends carry non-templated uridines.
13 expressed uptake of alpha-methylglucoside or uridine 1 hour later, we identified a RS1 domain (RS1-Re
14 nsor (viz., 2'-O-[(4-CF3-triazol-1-yl)methyl]uridine, 1) for (19)F NMR spectroscopic monitoring of RN
15 PIWI protein Aubergine typically begin with uridine (1U), while piRNAs bound to Argonaute3, which ar
16 le incorporation of a reversible pyrenylated uridine 2'-conjugate into an RNA sequence, the conjugati
17 -O-aminooxymethyl uridine provides permanent uridine 2'-conjugates, which are left essentially intact
18 of dFdC: the natural pyrimidine nucleosides uridine, 2'-deoxyuridine and thymidine inhibited mycopla
19 thylsilyl)germanes gave (Z)-5-(2-germylvinyl)uridine, 2'-deoxyuridine, or ara-uridine as major produc
22 tions of transfer RNAs (tRNAs) at the wobble uridine 34 (U34) base are highly conserved and contribut
24 nability to distinguish the diastereomers of uridine 5'-beta,gamma-fluoromethylenetriphosphate (beta,
25 mutant p53 target gene, which functions as a uridine 5'-diphosphatase (UDPase) in the endoplasmic ret
26 og was readily transformed in cells into the uridine 5'-diphosphate (UDP)-activated form, it was not
28 ch species, the galactan is constructed from uridine 5'-diphosphate-alpha-d-galactofuranose (UDP-Galf
30 (CYP) isoform 7A1 (CYP7A1), CYP27A1, CYP8B1, uridine 5'-diphospho-glucuronosyltransferase 1A1, 1A3, 1
31 t of murine cN-III with a natural substrate, uridine 5'-monophosphate, in the active site at 1.74A re
32 (ADO) and nucleotides such as ATP, ADP, and uridine 5'-triphosphate (UTP), among others, may serve a
33 as confirmed with fluorescein isothiocyanate-uridine 5'-triphosphate labeling, RNA fluorescence in si
34 rminal deoxynucleotidyl transferase-mediated uridine 5'-triphosphate-biotin nick end-labeling stainin
36 ges from WT but not KO mice, and that plasma uridine 5-diphosphoglucose levels were significantly hig
40 5 but not pan-Akt inhibitor MK2206 increased uridine-5'-diphosphate-hexose cell content which was sup
41 ase was observed in ATII cells stimulated by uridine-5'-triphosphate (UTP) and PMA, agonists inducing
43 s a Gq protein-coupled receptor activated by uridine-5'-triphosphate (UTP), which is widely expressed
44 estigated the role of hydrocortisone (HC) on uridine-5'-triphosphate (UTP)-stimulated ion transport i
45 tended N(4)-(3-arylpropyl)oxy derivatives of uridine-5'-triphosphate were synthesized and potently st
48 eplacement of T by 2'-deoxy-5-(hydroxymethyl)uridine (5hmU) in the genomic DNA of Escherichia coli.
49 5-((4-methoxy-phenyl)-trans-vinyl)-2'-deoxy-uridine, 6, as a fluorescent uridine analogue exhibiting
51 cell surface hENT1 expression, and decrease uridine accumulation when presented together with uridin
52 plicing, and RNA editing by substitution and uridine additions both reconstituting crucial coding seq
53 human and murine colon muscles also release uridine adenosine tetraphosphate (Up4A) spontaneously an
56 bisphosphonodithioate, 2 and 3, and P1,P2-di(uridine/adenosine-5')-methylenebisphosphonodithioate, 4
57 vinyl)-2'-deoxy-uridine, 6, as a fluorescent uridine analogue exhibiting a 3000-fold higher quantum y
59 us time scales by incorporating the (6-(13)C)uridine and -cytidine labels into biologically relevant
61 onuclease that posttranscriptionally removes uridine and adenosine nucleosides from the 3' end of spl
62 DA) catalyzes the deamination of cytidine to uridine and ammonia in the catabolic route of C nucleoti
63 ar syntheses of 4'-C-aminomethyl-2'-O-methyl uridine and cytidine nucleoside phosphoramidites were ac
64 5, 100, and 250 muM MPA) and upregulation of uridine and cytidine nucleotides (p < 0.001 at 24 h; 5 m
65 3A/L442I) previously shown to be involved in uridine and dipyridamole binding, suggested that BCR-ABL
66 f metal ions by the nucleobases of conserved uridine and guanosine in helix P4 of the RNA subunit (P
67 nding conformationally locked sugar modified uridine and guanosine nucleosides was achieved via Vorbr
70 ced by supplementation of culture media with uridine and N-acetylglucosamine (GlcNAc), precursors for
71 s a basis for understanding the evolution of uridine and purine nucleoside phosphorylases with respec
72 ese cells lack mtDNA and are auxotrophic for uridine and pyruvate, which may explain the apparent let
73 electronic effects at the 2-exo position of uridine and replacing the 2-exo oxygen with a selenium a
75 c protein in vivo are covalently marked with uridines and subsequently identified from extracted RNA
77 -acetylalanine, andro-steroid monosulfate 2, uridine, and gamma-glutamyl-leucine, showed independent
79 biosynthesis; ELP3, 5-methoxycarbonylmethyl uridine; and RSAD1 and viperin, both of unknown function
80 itical mediators of insulin sensitivity, and uridine as an important metabolite contributed by the ad
82 al nucleotidyl transferase activity, prefers uridine as the substrate nucleotide, and is completely i
83 ently introduced C5-functionalization of LNA uridines as an alternative and synthetically more straig
86 iolation of the universally conserved methyl-uridine at position 54 stabilizes tRNAs from thermophili
87 to convert 5-hydroxyuridine into 5-oxyacetyl uridine at the wobble position of multiple tRNAs in Gram
89 ombination (CSR) by deaminating cytidines to uridines at V region (V) genes and switch (S) regions.
90 e outlined and the syntheses of cytidine and uridine azo dye analogues derived from 6-aminouracil are
94 uoro-3'-C-hydroxymethyl-2',3'-endo-methylene-uridine by X-ray crystallography yielded the principal c
95 sperm organelles, cytidines are converted to uridines by a deamination reaction in the process termed
96 organelle genes are modified by cytidine-to-uridine (C-to-U) RNA editing, often changing the encoded
97 The simple nonredox substitution of the C2-uridine carbonyl oxygen by sulfur is catalyzed by tRNA t
98 les the deamination signature of cytidine to uridine carried out by members of the APOBEC3 family of
100 -containing cofactor FAD and highly abundant uridine-containing cell wall precursors, UDP-Glucose and
103 ough TLR7, the activation is proportional to uridine-content, and more precisely defined by the frequ
104 th metal ions, demonstrating that the bulged uridine coordinates at least one catalytic metal ion thr
106 ne structures of U2AF(65) bound to the deoxy-uridine counterparts and compared the original, RNA-boun
107 r that rapidly metabolizes DAC into inactive uridine counterparts, severely limiting exposure time an
108 K2 gene indicates that the disruption of the uridine-cytidine kinase affects E. chaffeensis replicati
111 f a terminal alkyne at the 5' position of an uridine derivative and O-glycosylation with a protected
115 zes the reversible conversion of sucrose and uridine diphosphate (UDP) into fructose and UDP-glucose,
116 o GlcNAc-1-phosphate during the synthesis of uridine diphosphate (UDP)-GlcNAc, a sugar nucleotide cri
117 ic steps of this pathway involve a series of uridine diphosphate (UDP)-linked peptidoglycan intermedi
118 ltransferase MurU catalyzes the synthesis of uridine diphosphate (UDP)-MurNAc, a crucial precursor of
120 46.82 mukat/Kg protein toward phloretin and uridine diphosphate glucose (UDPG) at an optimal tempera
122 ance of bilirubin requires the expression of uridine diphosphate glucuronosyltransferase (UGT) 1A1; w
123 ome for sequences with similarity to terpene URIDINE DIPHOSPHATE GLYCOSYLTRANSFERASES (UGTs) from Ara
124 iphosphate N-acetylhexosamine (UDP-HexNAc)]/[uridine diphosphate hexose (UDP-hexose)] ratio exhibited
125 uridine diphosphate N-acetylglucosamine and uridine diphosphate N-acetylgalactosamine, leading to th
126 osamine biosynthetic pathway (HBP) generates uridine diphosphate N-acetylglucosamine (UDP-GlcNAc) for
128 e fate of the chitin-biosynthesis precursor, uridine diphosphate N-acetylglucosamine (UDP-GlcNAc), wa
129 nsferase pp-alpha-GanT2 able to utilize both uridine diphosphate N-acetylglucosamine and uridine diph
130 ich catalyzes a key step in the synthesis of uridine diphosphate N-acetylglucosamine, which is requir
132 decreased, whereas the distribution of the [uridine diphosphate N-acetylhexosamine (UDP-HexNAc)]/[ur
137 ted by decreased enzyme activity and reduced uridine diphosphate-N-acetyl-D-glucosamine, along with d
138 GlcNAc) levels are modulated by two enzymes: uridine diphosphate-N-acetyl-D-glucosamine:polypeptidylt
139 nce studies indicated thatlymphostatin binds uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) but
140 mine biosynthetic pathway (HBP), to increase uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc).
143 ng glycosyltransferase O-GlcNAc transferase (uridine diphospho-N-acetylglucosamine:polypeptide beta-N
144 We demonstrate that recombinant JGT utilizes uridine diphosphoglucose to transfer glucose to hmU in t
146 sed binding isotope effects (BIE's) to probe uridine distortion in the complex with TcUP and sulfate
149 ing is converting hundreds of cytosines into uridines during organelle gene expression of land plants
150 by the earlier discovery of tRNA cytosine-to-uridine editing in eukaryotes, a reaction that has not b
154 R-133a, -146a, and -208a) were diminished by uridine-->adenosine mutation and by RNase pretreatment.
155 findings that implicate leptin signaling in uridine homeostasis and consequent metabolic control and
159 dition of mcm(5) and ncm(5) modifications to uridine in the tRNA anticodon 'wobble' position in both
160 way responsible for the thiolation of wobble uridines in cytoplasmic tRNAs tK(UUU), tQ(UUG) and tE(UU
162 disease exhibit elevated lactate and reduced uridine; in McArdle disease purine nucleotide metabolite
164 ergoes an essential process of mitochondrial uridine insertion and deletion RNA editing catalyzed by
170 ted substrate stem-loop, in which the target uridine is substituted by 5-fluorouridine (5-FU), reveal
175 rent subfamilies selectively reduce distinct uridines, located at spatially unique positions of folde
176 ion in Elp1 may be essential for tRNA wobble uridine modification by acting as tRNA binding motif.
177 on, ubiquitination and cytosolic tRNA wobble uridine modification via 5-methoxycarbonylmethyl-2-thiou
181 ted into aspartate (a nucleotide precursor), uridine monophosphate (a precursor of pyrimidine nucleos
182 ated 5'-adenosine monophosphate (AMP) and 5'-uridine monophosphate (UMP) molecules confined in multi-
183 showcase our workflow by annotating N-methyl-uridine monophosphate (UMP), lysomonogalactosyl-monopalm
185 ng allosteric and substrate binding sites of uridine monophosphate kinase, and suggested that in solu
187 the genome, we determined that the conserved uridine monophosphate phosphoribosyltransferase (UMPS),
188 We find that uric acid directly inhibits uridine monophosphate synthase (UMPS) and consequently r
189 and selected against, such as deficiency of uridine monophosphate synthase, complex vertebral malfor
190 Moreover, the presence of several umami (uridine monophosphate, inosine monophosphate, adenosine,
191 eads to build-up of the pathway intermediate uridine monophosphate, which is in turn degraded by a co
194 sed the safety and efficacy of sofosbuvir, a uridine nucleotide analogue, in treatment-naive patients
195 ngs to the class of 2'-deoxy-2'-spirooxetane uridine nucleotide prodrugs which are known as inhibitor
196 alyze deamination of cytidine nucleotides to uridine nucleotides (C-to-U) in single-strand DNA substr
197 eaves mitochondrial mRNA, inserts or deletes uridine nucleotides at specific positions and re-ligates
198 aracterized by the insertion and deletion of uridine nucleotides into otherwise nontranslatable messe
199 ce sites while adapting to both cytidine and uridine nucleotides with nearly equivalent frequencies.
200 y originate from an epoxy amide derived from uridine, obtained via reaction of uridyl aldehyde 19 wit
202 onylmethylation, respectively, of the wobble uridine of cytoplasmic (tK(UUU)), (tQ(UUG)), and (tE(UUC
207 report, the discovery of a beta-d-2'-Cl,2'-F-uridine phosphoramidate nucleotide 16, as a nontoxic pan
209 e transition state for the Trypanosoma cruzi uridine phosphorylase (TcUP) reaction has an expanded S(
214 pK(a) values for proton transfer from C-6 of uridine (pK(CH) = 28.8) and 5-fluorouridine (pK(CH) = 25
216 or dansyl chloride with 2'-O-aminooxymethyl uridine provides permanent uridine 2'-conjugates, which
219 seudouridylation changes the properties of a uridine residue and is likely to alter the role of its c
220 ins to pre-mRNAs with a site-specific 4-thio uridine residue at the -3 position of exon 1 was tested
221 ola virus shows that an addition of a single uridine residue in the glycoprotein gene at the editing
222 key adenine nucleotide (A102) and pausing 5 uridine residues downstream.We show that the 3' ends of
223 Psi) synthase Pus1 (hPus1) modifies specific uridine residues in several non-coding RNAs: tRNA, U2 sp
225 gion [CRE(2C)] templates the addition of two uridine residues to the virus genome-encoded RNA replica
227 ein, we explored the role of the adenine and uridine-rich element (ARE)-binding protein tristetraprol
228 R identified numerous copies of adenine- and uridine-rich elements, raising the possibility that unde
230 their 3' UTRs are too short to accommodate a uridine-rich motif required for stability of the materna
232 forms hexameric rings, which preferably bind uridine-rich RNA 3' ends on their proximal surface and a
233 Ms) and a glutamine-rich domain and binds to uridine-rich RNA sequences through its C-terminal RRM2 a
234 Furthermore, we found that Dnd1 binds to a uridine-rich sequence in the 3'-UTR of trim36, a vegetal
235 IVmac251 single-stranded RNA encoded several uridine-rich sequences that were potent TLR7/8 ligands i
236 tes the assembly of RNA-protein complexes of uridine-rich small nuclear ribonucleoproteins (UsnRNPs).
237 processing of noncoding RNAs, including the uridine-rich small nuclear RNA (UsnRNA) and enhancer RNA
240 ary DNA sequences, we discovered cytidine-to-uridine RNA editing in position 32 of two nucleus-encode
243 ly incorporated new photocaged guanosine and uridine RNA phosphoramidites into short RNA duplexes.
244 The facilitators for specific cytosine-to-uridine RNA-editing events in plant mitochondria and pla
247 selenium atom by synthesizing the novel 4-Se-uridine ((Se)U) phosphoramidite and Se-nucleobase-modifi
253 the folate-deficient diet, whereas maternal uridine supplementation increased NTD incidence, indepen
256 CDA converts 5hmdC and 5fdC into variants of uridine that are incorporated into DNA, resulting in acc
257 nucleosides such as guanosine, cytidine and uridine, the excellent specificity of this sensor toward
258 due to host metabolism converting orotate to uridine, thereby bypassing the loss of UMPS in the paras
259 mediate the direct conversion of cytidine to uridine, thereby effecting a C-->T (or G-->A) substituti
261 folate-deficient diets and supplemented with uridine, thymidine, or deoxyuridine were bred, and litte
262 plementation with the pyrimidine nucleosides uridine, thymidine, or deoxyuridine with and without fol
263 (Escherichia coli); when fed food with a low uridine/thymidine (U/T) level, germline proliferation is
265 transferase that prefers to add untemplated uridine to the 3' end of RNA, which is completely abolis
268 rough the specific insertion and deletion of uridines to generate functional open reading frames, man
269 ur data reveal key aspects of how XTUT7 adds uridines to RNAs, highlight the role of the basic region
272 transferases (TUTs) catalyze the addition of uridines to the 3' ends of RNAs and are implicated in th
278 erevisiae Nilotinib inhibited hENT1-mediated uridine transport most potently (IC50 value, 0.7 mum) fo
280 le in pyrimidine biosynthesis, since neither uridine treatment nor other pyrimidine biosynthesis inhi
282 bstantial levels of 2'-deoxy-2'-spirooxetane uridine triphosphate (8), a potent inhibitor of the HCV
283 ed overflow metabolism allows homeostasis of uridine triphosphate and cytidine triphosphate levels at
286 ting cleavage signature is the location of a uridine two nucleotides downstream in a single-stranded
287 otein editosomes catalyze pre-mRNA cleavage, uridine (U) insertion or deletion, and ligation as speci
288 e structurally diverse C5-functionalized LNA uridine (U) phosphoramidites were synthesized and incorp
290 Plant RNA editosomes modify cytidines (C) to uridines (U) at specific sites in plastid and mitochondr
291 Plant RNA editing modifies cytidines (C) to uridines (U) at specific sites in the transcripts of bot
292 tly controls the thiolation status of wobble-uridine (U34) nucleotides present on lysine, glutamine,
293 substituted the universally conserved bulged uridine (U51) in the P4 helix of circularly permuted Bac
294 ncludes at least two metal ions, a universal uridine (U52), and P RNA backbone moieties, but it is un
297 protecting groups for secondary alcohol and uridine ureido nitrogen are applied for simultaneous dep
298 More specifically, miRNAs that gained a 3' uridine were associated with the greatest decrease in ex
299 The five binding pockets of RRM recognize uridines with an unusual 5'-to-3' gradient of base selec
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